; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g12100 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g12100
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr9:10290132..10290743
RNA-Seq ExpressionMoc09g12100
SyntenyMoc09g12100
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]6.4e-4052.5Show/hide
Query:  MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGANYSRQEDDLRK--------------------KNSNLNDES
        MRT++CTME+ Y+++++A    S+S  +    D H   E R   L P     HP   +   Y+ Q  DLR+                    +NSN   ES
Subjt:  MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGANYSRQEDDLRK--------------------KNSNLNDES

Query:  HYTPIVPEGVITREEFDLMKSKFDAQIKTFKQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIKC
         Y PI PEGVITREEFD +KSKFDAQ++  K K EKKES FDDG++GE  FTSDILEA I  KFKT  MKPYD S DPKDYVEVFEGLMDFQAA+DAIKC
Subjt:  HYTPIVPEGVITREEFDLMKSKFDAQIKTFKQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIKC

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]1.9e-3654.49Show/hide
Query:  GETRDPSLHPENDDQHPVDND-GANYSRQEDDLRK-----------------------KNSNLNDESHYTPIVPEGVITREEFDLMKSKFDAQIKTFKQK
        GE   PS+ P N  + P+ ND G +YS +++DLRK                        NSNL  +S Y P++PE VI REEFDLMK +FD Q++  K +
Subjt:  GETRDPSLHPENDDQHPVDND-GANYSRQEDDLRK-----------------------KNSNLNDESHYTPIVPEGVITREEFDLMKSKFDAQIKTFKQK

Query:  YEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIKC
         EKKES FDD ++GE  FTSDI+EAPI  KFKT  MKPYD S DPKDYVEVFEGLMDFQAA+DAIKC
Subjt:  YEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIKC

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]1.0e-3753.16Show/hide
Query:  MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGANY-SRQEDDLRK---------KNSNLNDESHYTPIVPEGV
        MRT++ TMEE YNK+++     S+S  Q   ED H +G+     LH +  D+  +  D  ++ +R+ +   +         KNSN   ES Y PI PEGV
Subjt:  MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGANY-SRQEDDLRK---------KNSNLNDESHYTPIVPEGV

Query:  ITREEFDLMKSKFDAQIKTFKQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIKC
        ITREEF+ +KSKFDAQ++  K + EKKES FDDG++GE  FTSDILEA I  KFKT  MK YD S DPKDYVEVFEGLMDFQAA+DAIKC
Subjt:  ITREEFDLMKSKFDAQIKTFKQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIKC

XP_022157897.1 uncharacterized protein LOC111024503 [Momordica charantia]5.8e-3363.41Show/hide
Query:  DGANYSRQEDDLRKKNSNLNDESHYTPIVPEGVITREEFDLMKSKFDAQIKTFKQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESND
        D  +YSR+       NS+   +S Y P+ PE VITREEFDLMK +FD Q++  K K EKKE  FDDG++GE  FTSDILE PI  KFKT  MK YD S D
Subjt:  DGANYSRQEDDLRKKNSNLNDESHYTPIVPEGVITREEFDLMKSKFDAQIKTFKQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESND

Query:  PKDYVEVFEGLMDFQAASDAIKC
        PKDYVEVFEGLMDFQAA+DAIKC
Subjt:  PKDYVEVFEGLMDFQAASDAIKC

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]9.6e-3653.07Show/hide
Query:  MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGANYSRQEDDLRKKNSNLNDESHYTPIVPEGVITREEFDLMK
        MRT++ TMEE YN++++A   GS+S    D   +   G+ RD      +       +   ++         KNSN   ES Y P+VPEGVITREEFD +K
Subjt:  MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGANYSRQEDDLRKKNSNLNDESHYTPIVPEGVITREEFDLMK

Query:  SKFDAQIKTFKQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIK
        SKFDAQ++T K + E K S FDDG++GE  FTSDILEA I +KFKT  MKPYD S DPKDYVEVFEGLM FQAA+DAIK
Subjt:  SKFDAQIKTFKQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIK

TrEMBL top hitse value%identityAlignment
A0A6J1DDW5 uncharacterized protein LOC1110196343.1e-4052.5Show/hide
Query:  MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGANYSRQEDDLRK--------------------KNSNLNDES
        MRT++CTME+ Y+++++A    S+S  +    D H   E R   L P     HP   +   Y+ Q  DLR+                    +NSN   ES
Subjt:  MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGANYSRQEDDLRK--------------------KNSNLNDES

Query:  HYTPIVPEGVITREEFDLMKSKFDAQIKTFKQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIKC
         Y PI PEGVITREEFD +KSKFDAQ++  K K EKKES FDDG++GE  FTSDILEA I  KFKT  MKPYD S DPKDYVEVFEGLMDFQAA+DAIKC
Subjt:  HYTPIVPEGVITREEFDLMKSKFDAQIKTFKQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIKC

A0A6J1DPC9 uncharacterized protein LOC1110222809.3e-3754.49Show/hide
Query:  GETRDPSLHPENDDQHPVDND-GANYSRQEDDLRK-----------------------KNSNLNDESHYTPIVPEGVITREEFDLMKSKFDAQIKTFKQK
        GE   PS+ P N  + P+ ND G +YS +++DLRK                        NSNL  +S Y P++PE VI REEFDLMK +FD Q++  K +
Subjt:  GETRDPSLHPENDDQHPVDND-GANYSRQEDDLRK-----------------------KNSNLNDESHYTPIVPEGVITREEFDLMKSKFDAQIKTFKQK

Query:  YEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIKC
         EKKES FDD ++GE  FTSDI+EAPI  KFKT  MKPYD S DPKDYVEVFEGLMDFQAA+DAIKC
Subjt:  YEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIKC

A0A6J1DPN4 uncharacterized protein LOC1110230605.0e-3853.16Show/hide
Query:  MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGANY-SRQEDDLRK---------KNSNLNDESHYTPIVPEGV
        MRT++ TMEE YNK+++     S+S  Q   ED H +G+     LH +  D+  +  D  ++ +R+ +   +         KNSN   ES Y PI PEGV
Subjt:  MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGANY-SRQEDDLRK---------KNSNLNDESHYTPIVPEGV

Query:  ITREEFDLMKSKFDAQIKTFKQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIKC
        ITREEF+ +KSKFDAQ++  K + EKKES FDDG++GE  FTSDILEA I  KFKT  MK YD S DPKDYVEVFEGLMDFQAA+DAIKC
Subjt:  ITREEFDLMKSKFDAQIKTFKQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIKC

A0A6J1DVR0 uncharacterized protein LOC1110245032.8e-3363.41Show/hide
Query:  DGANYSRQEDDLRKKNSNLNDESHYTPIVPEGVITREEFDLMKSKFDAQIKTFKQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESND
        D  +YSR+       NS+   +S Y P+ PE VITREEFDLMK +FD Q++  K K EKKE  FDDG++GE  FTSDILE PI  KFKT  MK YD S D
Subjt:  DGANYSRQEDDLRKKNSNLNDESHYTPIVPEGVITREEFDLMKSKFDAQIKTFKQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESND

Query:  PKDYVEVFEGLMDFQAASDAIKC
        PKDYVEVFEGLMDFQAA+DAIKC
Subjt:  PKDYVEVFEGLMDFQAASDAIKC

A0A6J1DZJ1 uncharacterized protein LOC1110257384.6e-3653.07Show/hide
Query:  MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGANYSRQEDDLRKKNSNLNDESHYTPIVPEGVITREEFDLMK
        MRT++ TMEE YN++++A   GS+S    D   +   G+ RD      +       +   ++         KNSN   ES Y P+VPEGVITREEFD +K
Subjt:  MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGANYSRQEDDLRKKNSNLNDESHYTPIVPEGVITREEFDLMK

Query:  SKFDAQIKTFKQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIK
        SKFDAQ++T K + E K S FDDG++GE  FTSDILEA I +KFKT  MKPYD S DPKDYVEVFEGLM FQAA+DAIK
Subjt:  SKFDAQIKTFKQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTACTCGGGTGTGCACTATGGAGGAGACTTACAACAAATTAATGCGAGCCAATCGCACAGGATCCCAATCACGGATCCAAGGGGATGGGGAGGACCAGCACTACGA
AGGCGAGACTAGGGATCCTTCTCTCCACCCAGAGAATGACGATCAACACCCTGTCGATAATGATGGGGCCAATTATAGTCGTCAGGAGGACGACTTAAGGAAAAAGAACT
CGAACTTGAATGATGAATCTCATTACACTCCGATTGTACCTGAAGGAGTTATTACAAGGGAAGAGTTCGACCTAATGAAAAGCAAGTTTGACGCTCAGATCAAGACTTTC
AAACAAAAGTACGAGAAGAAAGAAAGTGTGTTTGACGATGGCGAAATGGGCGAATTGTCGTTCACTTCGGACATCCTTGAGGCACCCATCCTTGCCAAATTCAAGACATC
CGCCATGAAGCCTTACGATGAGTCAAATGACCCAAAAGATTATGTTGAGGTCTTTGAGGGCCTCATGGACTTCCAAGCGGCATCTGATGCCATCAAGTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGTACTCGGGTGTGCACTATGGAGGAGACTTACAACAAATTAATGCGAGCCAATCGCACAGGATCCCAATCACGGATCCAAGGGGATGGGGAGGACCAGCACTACGA
AGGCGAGACTAGGGATCCTTCTCTCCACCCAGAGAATGACGATCAACACCCTGTCGATAATGATGGGGCCAATTATAGTCGTCAGGAGGACGACTTAAGGAAAAAGAACT
CGAACTTGAATGATGAATCTCATTACACTCCGATTGTACCTGAAGGAGTTATTACAAGGGAAGAGTTCGACCTAATGAAAAGCAAGTTTGACGCTCAGATCAAGACTTTC
AAACAAAAGTACGAGAAGAAAGAAAGTGTGTTTGACGATGGCGAAATGGGCGAATTGTCGTTCACTTCGGACATCCTTGAGGCACCCATCCTTGCCAAATTCAAGACATC
CGCCATGAAGCCTTACGATGAGTCAAATGACCCAAAAGATTATGTTGAGGTCTTTGAGGGCCTCATGGACTTCCAAGCGGCATCTGATGCCATCAAGTGCTGA
Protein sequenceShow/hide protein sequence
MRTRVCTMEETYNKLMRANRTGSQSRIQGDGEDQHYEGETRDPSLHPENDDQHPVDNDGANYSRQEDDLRKKNSNLNDESHYTPIVPEGVITREEFDLMKSKFDAQIKTF
KQKYEKKESVFDDGEMGELSFTSDILEAPILAKFKTSAMKPYDESNDPKDYVEVFEGLMDFQAASDAIKC