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Moc09g12210 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g12210
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr9:10341698..10343532
RNA-Seq ExpressionMoc09g12210
SyntenyMoc09g12210
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143500.1 uncharacterized protein LOC111013378 [Momordica charantia]2.0e-2966.67Show/hide
Query:  LDEAVMTSLRVETMLKQQNSVVDNLLEQTYEICQEILYLDCEGELARSWSKAHESLELKDIGRKQLKPCIEEPLELEMKALPRHLKYAYLGASNTLPVII
        LDEAV+ SL  E ML++QN  VD +LEQ  EICQEILY DC  +LARSWS+ HESL L+DIGRKQLK  IEE  EL +KA+P+H+KYAYLGASN LP+II
Subjt:  LDEAVMTSLRVETMLKQQNSVVDNLLEQTYEICQEILYLDCEGELARSWSKAHESLELKDIGRKQLKPCIEEPLELEMKALPRHLKYAYLGASNTLPVII

Query:  AANLSAEK
         A L  EK
Subjt:  AANLSAEK

XP_022150853.1 uncharacterized protein LOC111018898 [Momordica charantia]4.5e-1875.38Show/hide
Query:  ELARSWSKAHESLELKDIGRKQLKPCIEEPLELEMKALPRHLKYAYLGASNTLPVIIAANLSAEK
        +LARSWS+ HESL+L+DIGRKQLKP IEEP ELE+K L +HLKYAYLGASNTLP+II A+L+ EK
Subjt:  ELARSWSKAHESLELKDIGRKQLKPCIEEPLELEMKALPRHLKYAYLGASNTLPVIIAANLSAEK

XP_022153147.1 probable serine/threonine-protein kinase PBL11 [Momordica charantia]3.8e-1736.79Show/hide
Query:  MNDFPTFEFTVDPKQKCTLSKRRTEQRIQGREIVMNPEAPIRPEHELERIEGVRPGAVVP--VPPMNIVLLADDTEQEIRAYAAPTFYDFNLVIADPIIE
        M+D    E+ +D + +CT  +R  EQR Q        +    P  +L R+       VVP   P +N +LLADD E+ IRAYAA   + F+ VIA P IE
Subjt:  MNDFPTFEFTVDPKQKCTLSKRRTEQRIQGREIVMNPEAPIRPEHELERIEGVRPGAVVP--VPPMNIVLLADDTEQEIRAYAAPTFYDFNLVIADPIIE

Query:  VDR---------------------------HLRYFMQVVDSFKVEG------VNASANEALLSKPYAEAFDILERISRNKHQWSKSRAAASTN
         +R                           HLRYF+++ + +          V+ASAN ALLSK Y EA DILERIS N + WS SRA  S +
Subjt:  VDR---------------------------HLRYFMQVVDSFKVEG------VNASANEALLSKPYAEAFDILERISRNKHQWSKSRAAASTN

XP_022158578.1 uncharacterized protein LOC111025032 [Momordica charantia]4.5e-3474.07Show/hide
Query:  LDEAVMTSLRVETMLKQQNSVVDNLLEQTYEICQEILYLDCEGELARSWSKAHESLELKDIGRKQLKPCIEEPLELEMKALPRHLKYAYLGASNTLPVII
        LDEAVM SL  ETML+Q NS VDN+L++  EICQEILYLDCEG+LARSWS  HESLEL+DI  KQLKP  +EP ELE+KALP+HLKYAYL ASN LP+II
Subjt:  LDEAVMTSLRVETMLKQQNSVVDNLLEQTYEICQEILYLDCEGELARSWSKAHESLELKDIGRKQLKPCIEEPLELEMKALPRHLKYAYLGASNTLPVII

Query:  AANLSAEK
        AANL+ EK
Subjt:  AANLSAEK

XP_022158768.1 uncharacterized protein LOC111025234 [Momordica charantia]8.2e-4446.3Show/hide
Query:  PEAPIRPEHELERIEGVRPGAVVPVPPMNIVLLADDTEQEIRAYAAPTFYDFNLVIADPIIEVD------------------------RHLRYFMQVVDS
        P  PI+P+ ++ER++G   G     PP+N +LL DD EQEIRAYAAP F+DFN VI DPIIE D                        RHL+YFMQV +S
Subjt:  PEAPIRPEHELERIEGVRPGAVVPVPPMNIVLLADDTEQEIRAYAAPTFYDFNLVIADPIIEVD------------------------RHLRYFMQVVDS

Query:  FKVEG--VNASANEALLSKPYAEAFDILERISRNKHQWSKSRAAASTNSKRL-----VADLNSKISRLVNIVMKSATTSEAGASKAK-------------
         KVE   ++AS+N+ALL K YAEAFDILE ISRNKHQ SKSRA +ST SK L     VA+LNSKIS+L +I MKS + S+AGASKAK             
Subjt:  FKVEG--VNASANEALLSKPYAEAFDILERISRNKHQWSKSRAAASTNSKRL-----VADLNSKISRLVNIVMKSATTSEAGASKAK-------------

Query:  ---------------------------NQQINQKLPEPLSLEDMFKAYMTRNDANVQSQAALLQSQAASL
                                   NQQ   K PE ++LEDMFKAYM +N+  +      +QS AASL
Subjt:  ---------------------------NQQINQKLPEPLSLEDMFKAYMTRNDANVQSQAALLQSQAASL

TrEMBL top hitse value%identityAlignment
A0A6J1CNZ2 uncharacterized protein LOC1110133789.5e-3066.67Show/hide
Query:  LDEAVMTSLRVETMLKQQNSVVDNLLEQTYEICQEILYLDCEGELARSWSKAHESLELKDIGRKQLKPCIEEPLELEMKALPRHLKYAYLGASNTLPVII
        LDEAV+ SL  E ML++QN  VD +LEQ  EICQEILY DC  +LARSWS+ HESL L+DIGRKQLK  IEE  EL +KA+P+H+KYAYLGASN LP+II
Subjt:  LDEAVMTSLRVETMLKQQNSVVDNLLEQTYEICQEILYLDCEGELARSWSKAHESLELKDIGRKQLKPCIEEPLELEMKALPRHLKYAYLGASNTLPVII

Query:  AANLSAEK
         A L  EK
Subjt:  AANLSAEK

A0A6J1DAJ9 uncharacterized protein LOC1110188982.2e-1875.38Show/hide
Query:  ELARSWSKAHESLELKDIGRKQLKPCIEEPLELEMKALPRHLKYAYLGASNTLPVIIAANLSAEK
        +LARSWS+ HESL+L+DIGRKQLKP IEEP ELE+K L +HLKYAYLGASNTLP+II A+L+ EK
Subjt:  ELARSWSKAHESLELKDIGRKQLKPCIEEPLELEMKALPRHLKYAYLGASNTLPVIIAANLSAEK

A0A6J1DI54 probable serine/threonine-protein kinase PBL111.9e-1736.79Show/hide
Query:  MNDFPTFEFTVDPKQKCTLSKRRTEQRIQGREIVMNPEAPIRPEHELERIEGVRPGAVVP--VPPMNIVLLADDTEQEIRAYAAPTFYDFNLVIADPIIE
        M+D    E+ +D + +CT  +R  EQR Q        +    P  +L R+       VVP   P +N +LLADD E+ IRAYAA   + F+ VIA P IE
Subjt:  MNDFPTFEFTVDPKQKCTLSKRRTEQRIQGREIVMNPEAPIRPEHELERIEGVRPGAVVP--VPPMNIVLLADDTEQEIRAYAAPTFYDFNLVIADPIIE

Query:  VDR---------------------------HLRYFMQVVDSFKVEG------VNASANEALLSKPYAEAFDILERISRNKHQWSKSRAAASTN
         +R                           HLRYF+++ + +          V+ASAN ALLSK Y EA DILERIS N + WS SRA  S +
Subjt:  VDR---------------------------HLRYFMQVVDSFKVEG------VNASANEALLSKPYAEAFDILERISRNKHQWSKSRAAASTN

A0A6J1DWH3 uncharacterized protein LOC1110250322.2e-3474.07Show/hide
Query:  LDEAVMTSLRVETMLKQQNSVVDNLLEQTYEICQEILYLDCEGELARSWSKAHESLELKDIGRKQLKPCIEEPLELEMKALPRHLKYAYLGASNTLPVII
        LDEAVM SL  ETML+Q NS VDN+L++  EICQEILYLDCEG+LARSWS  HESLEL+DI  KQLKP  +EP ELE+KALP+HLKYAYL ASN LP+II
Subjt:  LDEAVMTSLRVETMLKQQNSVVDNLLEQTYEICQEILYLDCEGELARSWSKAHESLELKDIGRKQLKPCIEEPLELEMKALPRHLKYAYLGASNTLPVII

Query:  AANLSAEK
        AANL+ EK
Subjt:  AANLSAEK

A0A6J1DX14 uncharacterized protein LOC1110252344.0e-4446.3Show/hide
Query:  PEAPIRPEHELERIEGVRPGAVVPVPPMNIVLLADDTEQEIRAYAAPTFYDFNLVIADPIIEVD------------------------RHLRYFMQVVDS
        P  PI+P+ ++ER++G   G     PP+N +LL DD EQEIRAYAAP F+DFN VI DPIIE D                        RHL+YFMQV +S
Subjt:  PEAPIRPEHELERIEGVRPGAVVPVPPMNIVLLADDTEQEIRAYAAPTFYDFNLVIADPIIEVD------------------------RHLRYFMQVVDS

Query:  FKVEG--VNASANEALLSKPYAEAFDILERISRNKHQWSKSRAAASTNSKRL-----VADLNSKISRLVNIVMKSATTSEAGASKAK-------------
         KVE   ++AS+N+ALL K YAEAFDILE ISRNKHQ SKSRA +ST SK L     VA+LNSKIS+L +I MKS + S+AGASKAK             
Subjt:  FKVEG--VNASANEALLSKPYAEAFDILERISRNKHQWSKSRAAASTNSKRL-----VADLNSKISRLVNIVMKSATTSEAGASKAK-------------

Query:  ---------------------------NQQINQKLPEPLSLEDMFKAYMTRNDANVQSQAALLQSQAASL
                                   NQQ   K PE ++LEDMFKAYM +N+  +      +QS AASL
Subjt:  ---------------------------NQQINQKLPEPLSLEDMFKAYMTRNDANVQSQAALLQSQAASL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGACTTCCCTACGTTTGAATTTACTGTTGACCCAAAACAAAAATGTACATTGAGTAAAAGAAGGACTGAGCAGCGAATACAGGGTAGGGAAATAGTCATGAATCC
AGAAGCGCCAATTCGGCCTGAACATGAATTGGAAAGGATAGAAGGGGTTAGGCCTGGAGCTGTTGTCCCAGTGCCTCCCATGAACATTGTCCTGCTTGCAGATGACACGG
AGCAGGAAATTAGAGCATACGCAGCTCCAACTTTCTATGACTTCAATCTTGTAATAGCTGACCCTATAATTGAAGTAGATAGGCATCTACGGTACTTCATGCAAGTGGTC
GACTCATTTAAGGTAGAGGGAGTCAATGCTTCAGCAAATGAAGCTTTACTATCAAAGCCATATGCAGAAGCTTTTGACATCTTAGAGAGAATTTCTCGGAATAAACATCA
ATGGTCAAAGTCGAGGGCAGCTGCATCTACAAATTCAAAAAGGCTGGTAGCAGATTTAAACTCGAAGATATCACGATTGGTTAACATAGTTATGAAGAGTGCTACAACAA
GTGAGGCTGGAGCCTCCAAGGCTAAGAATCAGCAGATCAACCAAAAGCTTCCAGAACCACTGAGTTTGGAAGATATGTTCAAGGCATACATGACAAGGAATGATGCCAAT
GTGCAAAGCCAAGCTGCATTGCTACAGAGTCAAGCAGCATCCTTGCGGCTAGATGAAGCTGTGATGACGTCGCTCCGTGTAGAGACAATGCTAAAGCAACAGAACAGTGT
AGTGGATAATCTGTTGGAGCAGACATATGAAATATGCCAAGAAATCCTCTATTTGGACTGCGAAGGAGAATTAGCAAGATCATGGTCAAAAGCTCACGAGAGCCTGGAAT
TAAAGGACATCGGACGTAAGCAGTTGAAACCATGTATCGAGGAGCCACTCGAATTGGAGATGAAAGCCCTCCCGCGACATTTAAAGTATGCTTACCTCGGAGCATCCAAC
ACCTTGCCTGTTATAATTGCTGCAAATCTATCTGCAGAAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGACTTCCCTACGTTTGAATTTACTGTTGACCCAAAACAAAAATGTACATTGAGTAAAAGAAGGACTGAGCAGCGAATACAGGGTAGGGAAATAGTCATGAATCC
AGAAGCGCCAATTCGGCCTGAACATGAATTGGAAAGGATAGAAGGGGTTAGGCCTGGAGCTGTTGTCCCAGTGCCTCCCATGAACATTGTCCTGCTTGCAGATGACACGG
AGCAGGAAATTAGAGCATACGCAGCTCCAACTTTCTATGACTTCAATCTTGTAATAGCTGACCCTATAATTGAAGTAGATAGGCATCTACGGTACTTCATGCAAGTGGTC
GACTCATTTAAGGTAGAGGGAGTCAATGCTTCAGCAAATGAAGCTTTACTATCAAAGCCATATGCAGAAGCTTTTGACATCTTAGAGAGAATTTCTCGGAATAAACATCA
ATGGTCAAAGTCGAGGGCAGCTGCATCTACAAATTCAAAAAGGCTGGTAGCAGATTTAAACTCGAAGATATCACGATTGGTTAACATAGTTATGAAGAGTGCTACAACAA
GTGAGGCTGGAGCCTCCAAGGCTAAGAATCAGCAGATCAACCAAAAGCTTCCAGAACCACTGAGTTTGGAAGATATGTTCAAGGCATACATGACAAGGAATGATGCCAAT
GTGCAAAGCCAAGCTGCATTGCTACAGAGTCAAGCAGCATCCTTGCGGCTAGATGAAGCTGTGATGACGTCGCTCCGTGTAGAGACAATGCTAAAGCAACAGAACAGTGT
AGTGGATAATCTGTTGGAGCAGACATATGAAATATGCCAAGAAATCCTCTATTTGGACTGCGAAGGAGAATTAGCAAGATCATGGTCAAAAGCTCACGAGAGCCTGGAAT
TAAAGGACATCGGACGTAAGCAGTTGAAACCATGTATCGAGGAGCCACTCGAATTGGAGATGAAAGCCCTCCCGCGACATTTAAAGTATGCTTACCTCGGAGCATCCAAC
ACCTTGCCTGTTATAATTGCTGCAAATCTATCTGCAGAAAAATAA
Protein sequenceShow/hide protein sequence
MNDFPTFEFTVDPKQKCTLSKRRTEQRIQGREIVMNPEAPIRPEHELERIEGVRPGAVVPVPPMNIVLLADDTEQEIRAYAAPTFYDFNLVIADPIIEVDRHLRYFMQVV
DSFKVEGVNASANEALLSKPYAEAFDILERISRNKHQWSKSRAAASTNSKRLVADLNSKISRLVNIVMKSATTSEAGASKAKNQQINQKLPEPLSLEDMFKAYMTRNDAN
VQSQAALLQSQAASLRLDEAVMTSLRVETMLKQQNSVVDNLLEQTYEICQEILYLDCEGELARSWSKAHESLELKDIGRKQLKPCIEEPLELEMKALPRHLKYAYLGASN
TLPVIIAANLSAEK