; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g12260 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g12260
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:10362283..10366112
RNA-Seq ExpressionMoc09g12260
SyntenyMoc09g12260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151636.1 uncharacterized protein LOC111019544 [Momordica charantia]3.7e-7574.48Show/hide
Query:  IEIKDQRLLRWPERMKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKKRKAS
        +EIKDQRL +WPERMKA PNKRSK RYCLFHRDHGHAT DCFDLKEEVEG I +GYLKEY+EDPKAT NSEND+KSP +EIQTI GG TE E G+KRK S
Subjt:  IEIKDQRLLRWPERMKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKKRKAS

Query:  MQEARASPGYCKVYHASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVG
        ++EAR   G+ +VYH +F G+PSKI+ SEDET  LFHPHNDALVITL+I NT+VHRIL D GSS GIISLTAYKAMDLG++ LKS+ A  VG
Subjt:  MQEARASPGYCKVYHASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVG

XP_022158093.1 uncharacterized protein LOC111024662 [Momordica charantia]6.4e-96100Show/hide
Query:  MKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKKRKASMQEARASPGYCKVY
        MKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKKRKASMQEARASPGYCKVY
Subjt:  MKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKKRKASMQEARASPGYCKVY

Query:  HASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVG
        HASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVG
Subjt:  HASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVG

XP_022158621.1 uncharacterized protein LOC111025072 [Momordica charantia]3.5e-7072.92Show/hide
Query:  IEIKDQRLLRWPERMKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKKRKAS
        +EIKDQRLL+WPERMKA   KRSK RYCLFHRDHGHATQDCFDL EEVEGLIRRGYL+EYVE+PKAT N E+ DKSP +EI+TI GGP ERE G+KRKA 
Subjt:  IEIKDQRLLRWPERMKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKKRKAS

Query:  MQEARASPGYCKVYHASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVG
        +QEARA+    +VYHA  T +P  I+FSEDE T L HPHNDAL ITLKI N KVHRILVDGG+   IIS TAY  MDLGEK LKS+ APL G
Subjt:  MQEARASPGYCKVYHASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVG

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.3e-7273.47Show/hide
Query:  DAVLIEIKDQRLLRWPERMKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKK
        + VL+EIKDQRLL+WPERMKA   KRSK RYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVE+PKAT N E+ DKSP +EI+TI GGP ERE G+K
Subjt:  DAVLIEIKDQRLLRWPERMKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKK

Query:  RKASMQEARASPGYCKVYHASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVG
        RKA ++EAR S    +VYHA  T +P  I+FSEDE T L HPHNDALVI LKI N KVHR+LVDGGSS  I+S TAYKAMDL EK LK + APLVG
Subjt:  RKASMQEARASPGYCKVYHASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVG

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.6e-0986.05Show/hide
Query:  GQNRSRPVAYLLTIKQKATESLHDYVARFNEEKLQVEGFTDAV
        G+ RSRPVAYLLTIKQ+ TESL DYVARFNEEKLQVEG TDAV
Subjt:  GQNRSRPVAYLLTIKQKATESLHDYVARFNEEKLQVEGFTDAV

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]9.3e-7171.28Show/hide
Query:  DAVLIEIKDQRLLRWPERMKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKK
        + VL+EIK QRLL+WPERM A  +KRSK RYCLFHRDH HATQDCFDLK+EV+ LI+RGYLKEYVEDPKAT N END KSP +EI+TI GGP ERE G+K
Subjt:  DAVLIEIKDQRLLRWPERMKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKK

Query:  RKASMQEARASPGYCKVYHASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLV
        RKAS++E R S    ++YH     QP+KI+FSEDE T L HPHND LVITLKI N KVHRILVDGGSS  IISLTAYKAMDLGE+  KS+ A LV
Subjt:  RKASMQEARASPGYCKVYHASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLV

TrEMBL top hitse value%identityAlignment
A0A6J1DF96 uncharacterized protein LOC1110195441.8e-7574.48Show/hide
Query:  IEIKDQRLLRWPERMKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKKRKAS
        +EIKDQRL +WPERMKA PNKRSK RYCLFHRDHGHAT DCFDLKEEVEG I +GYLKEY+EDPKAT NSEND+KSP +EIQTI GG TE E G+KRK S
Subjt:  IEIKDQRLLRWPERMKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKKRKAS

Query:  MQEARASPGYCKVYHASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVG
        ++EAR   G+ +VYH +F G+PSKI+ SEDET  LFHPHNDALVITL+I NT+VHRIL D GSS GIISLTAYKAMDLG++ LKS+ A  VG
Subjt:  MQEARASPGYCKVYHASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVG

A0A6J1DV51 uncharacterized protein LOC1110246623.1e-96100Show/hide
Query:  MKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKKRKASMQEARASPGYCKVY
        MKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKKRKASMQEARASPGYCKVY
Subjt:  MKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKKRKASMQEARASPGYCKVY

Query:  HASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVG
        HASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVG
Subjt:  HASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVG

A0A6J1DWY0 uncharacterized protein LOC1110252938.2e-7373.47Show/hide
Query:  DAVLIEIKDQRLLRWPERMKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKK
        + VL+EIKDQRLL+WPERMKA   KRSK RYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVE+PKAT N E+ DKSP +EI+TI GGP ERE G+K
Subjt:  DAVLIEIKDQRLLRWPERMKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKK

Query:  RKASMQEARASPGYCKVYHASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVG
        RKA ++EAR S    +VYHA  T +P  I+FSEDE T L HPHNDALVI LKI N KVHR+LVDGGSS  I+S TAYKAMDL EK LK + APLVG
Subjt:  RKASMQEARASPGYCKVYHASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVG

A0A6J1DWY0 uncharacterized protein LOC1110252937.6e-1086.05Show/hide
Query:  GQNRSRPVAYLLTIKQKATESLHDYVARFNEEKLQVEGFTDAV
        G+ RSRPVAYLLTIKQ+ TESL DYVARFNEEKLQVEG TDAV
Subjt:  GQNRSRPVAYLLTIKQKATESLHDYVARFNEEKLQVEGFTDAV

A0A6J1DWY0 uncharacterized protein LOC1110252934.5e-7171.28Show/hide
Query:  DAVLIEIKDQRLLRWPERMKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKK
        + VL+EIK QRLL+WPERM A  +KRSK RYCLFHRDH HATQDCFDLK+EV+ LI+RGYLKEYVEDPKAT N END KSP +EI+TI GGP ERE G+K
Subjt:  DAVLIEIKDQRLLRWPERMKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKK

Query:  RKASMQEARASPGYCKVYHASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLV
        RKAS++E R S    ++YH     QP+KI+FSEDE T L HPHND LVITLKI N KVHRILVDGGSS  IISLTAYKAMDLGE+  KS+ A LV
Subjt:  RKASMQEARASPGYCKVYHASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLV

A0A6J1E1G3 uncharacterized protein LOC1110250721.7e-7072.92Show/hide
Query:  IEIKDQRLLRWPERMKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKKRKAS
        +EIKDQRLL+WPERMKA   KRSK RYCLFHRDHGHATQDCFDL EEVEGLIRRGYL+EYVE+PKAT N E+ DKSP +EI+TI GGP ERE G+KRKA 
Subjt:  IEIKDQRLLRWPERMKAHPNKRSKERYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKKRKAS

Query:  MQEARASPGYCKVYHASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVG
        +QEARA+    +VYHA  T +P  I+FSEDE T L HPHNDAL ITLKI N KVHRILVDGG+   IIS TAY  MDLGEK LKS+ APL G
Subjt:  MQEARASPGYCKVYHASFTGQPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACCTCAGATCGATAGACCTCGACAAGGAAAAACCGATGGAACGACTCGAACTATCGGAAAAATAATTGAGCTAAAAGGAAAAGGGATTCGACCTCGAGGAGTTAG
TAGACTAGAAGGGCAGAACCGAAGCCGACCAGTAGCTTACCTCCTGACCATAAAACAGAAAGCGACGGAGAGCCTTCATGACTATGTGGCTCGGTTTAACGAAGAGAAGC
TACAAGTGGAAGGTTTTACTGATGCGGTATTGATCGAGATCAAGGATCAAAGGTTGCTTAGATGGCCAGAGAGGATGAAAGCACATCCGAATAAGAGAAGCAAGGAGAGA
TATTGCCTCTTCCATCGAGACCATGGGCATGCCACACAGGATTGTTTTGATCTCAAGGAAGAGGTGGAAGGACTTATTCGGAGAGGATATCTCAAGGAGTATGTGGAAGA
TCCCAAAGCAACTCTAAACAGTGAGAATGACGACAAGTCCCCTGTCAAGGAAATCCAGACAATATTTGGAGGTCCAACAGAGAGAGAGTTAGGTAAGAAGAGAAAAGCGA
GCATGCAGGAAGCTAGGGCAAGCCCAGGGTATTGCAAAGTCTACCACGCATCTTTTACAGGGCAGCCCTCCAAAATCAAGTTTTCAGAGGATGAGACAACCCGCCTCTTC
CATCCACATAACGACGCACTAGTTATTACCCTAAAAATAACCAATACAAAGGTGCATCGAATTCTAGTGGATGGGGGTAGCTCGACCGGCATCATCTCCCTAACGGCTTA
TAAAGCTATGGATTTAGGAGAAAAGGCCCTTAAAAGTAACCTCGCACCACTAGTAGGTCCTTTGCTAGCTCATAACGGAACTATTCTTCTCGATATACACAAGAAGAAAA
ACCACAGAACTCCCAAGAGAATTTTCTCTCCATCTCAAGCTCTCTCAATTCTCCCTCTCATTCCAAATCGGTGCTCCCACAAGCACGATCTCGAGACCCAAGAGGATAGC
ACGGAAGACTCTCTAGTGGTGTTCATTGGTTACTCCATTGAAGAAAGGTTCTTCAAAGTCTTAAGTGCTCTTGGAGAAATGAGTAGTCGATGCCAGGGTGTTCGTTGGAA
ACTTGGCGAAGAGACCATAAGACGCCATATTCCATGGCTGCATTCTGCAGATTGGCCAGTTAATCTTGAGATCTCATTCTCTCAGTTTCCAGGTCATGTTGAGCATTCTC
TAGTAGGCTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGACCTCAGATCGATAGACCTCGACAAGGAAAAACCGATGGAACGACTCGAACTATCGGAAAAATAATTGAGCTAAAAGGAAAAGGGATTCGACCTCGAGGAGTTAG
TAGACTAGAAGGGCAGAACCGAAGCCGACCAGTAGCTTACCTCCTGACCATAAAACAGAAAGCGACGGAGAGCCTTCATGACTATGTGGCTCGGTTTAACGAAGAGAAGC
TACAAGTGGAAGGTTTTACTGATGCGGTATTGATCGAGATCAAGGATCAAAGGTTGCTTAGATGGCCAGAGAGGATGAAAGCACATCCGAATAAGAGAAGCAAGGAGAGA
TATTGCCTCTTCCATCGAGACCATGGGCATGCCACACAGGATTGTTTTGATCTCAAGGAAGAGGTGGAAGGACTTATTCGGAGAGGATATCTCAAGGAGTATGTGGAAGA
TCCCAAAGCAACTCTAAACAGTGAGAATGACGACAAGTCCCCTGTCAAGGAAATCCAGACAATATTTGGAGGTCCAACAGAGAGAGAGTTAGGTAAGAAGAGAAAAGCGA
GCATGCAGGAAGCTAGGGCAAGCCCAGGGTATTGCAAAGTCTACCACGCATCTTTTACAGGGCAGCCCTCCAAAATCAAGTTTTCAGAGGATGAGACAACCCGCCTCTTC
CATCCACATAACGACGCACTAGTTATTACCCTAAAAATAACCAATACAAAGGTGCATCGAATTCTAGTGGATGGGGGTAGCTCGACCGGCATCATCTCCCTAACGGCTTA
TAAAGCTATGGATTTAGGAGAAAAGGCCCTTAAAAGTAACCTCGCACCACTAGTAGGTCCTTTGCTAGCTCATAACGGAACTATTCTTCTCGATATACACAAGAAGAAAA
ACCACAGAACTCCCAAGAGAATTTTCTCTCCATCTCAAGCTCTCTCAATTCTCCCTCTCATTCCAAATCGGTGCTCCCACAAGCACGATCTCGAGACCCAAGAGGATAGC
ACGGAAGACTCTCTAGTGGTGTTCATTGGTTACTCCATTGAAGAAAGGTTCTTCAAAGTCTTAAGTGCTCTTGGAGAAATGAGTAGTCGATGCCAGGGTGTTCGTTGGAA
ACTTGGCGAAGAGACCATAAGACGCCATATTCCATGGCTGCATTCTGCAGATTGGCCAGTTAATCTTGAGATCTCATTCTCTCAGTTTCCAGGTCATGTTGAGCATTCTC
TAGTAGGCTGTTAG
Protein sequenceShow/hide protein sequence
MRPQIDRPRQGKTDGTTRTIGKIIELKGKGIRPRGVSRLEGQNRSRPVAYLLTIKQKATESLHDYVARFNEEKLQVEGFTDAVLIEIKDQRLLRWPERMKAHPNKRSKER
YCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKKRKASMQEARASPGYCKVYHASFTGQPSKIKFSEDETTRLF
HPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVGPLLAHNGTILLDIHKKKNHRTPKRIFSPSQALSILPLIPNRCSHKHDLETQEDS
TEDSLVVFIGYSIEERFFKVLSALGEMSSRCQGVRWKLGEETIRRHIPWLHSADWPVNLEISFSQFPGHVEHSLVGC