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Moc09g12670 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g12670
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPectinesterase
Genome locationchr9:10813532..10818729
RNA-Seq ExpressionMoc09g12670
SyntenyMoc09g12670
Gene Ontology termsGO:0042545 - cell wall modification (biological process)
GO:0030599 - pectinesterase activity (molecular function)
InterPro domainsIPR000070 - Pectinesterase, catalytic
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148123.1 probable pectinesterase/pectinesterase inhibitor 39 [Momordica charantia]3.2e-1054.67Show/hide
Query:  GPGIFYSLNTNERLPRVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD
        G  IF   N   R+     T  SKS   + S FTFQN NV VS E Q  KDQV  SLGRPWR+YST+ F+ESFLD
Subjt:  GPGIFYSLNTNERLPRVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD

XP_022952993.1 probable pectinesterase/pectinesterase inhibitor 7 [Cucurbita moschata]4.3e-0745.45Show/hide
Query:  GPGIFYSLNTNERLP--RVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD
        G  +F   N   RLP   +  T  SK  +  +S F+FQN  V VS E    K +V   LGRPWR YST+ F+ESFLD
Subjt:  GPGIFYSLNTNERLP--RVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD

XP_023002625.1 probable pectinesterase/pectinesterase inhibitor 39 [Cucurbita maxima]8.6e-0838.54Show/hide
Query:  IFYSLNTNERLPRVQGTL--YSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLDG-----REVRVVGVPTFFSHFG
        +F   N   RL  +Q T+   SK++  ++S F FQN  V VS E    +D+V+  LGRPWR+YS + F+ESFLD        +  +GVP    ++G
Subjt:  IFYSLNTNERLPRVQGTL--YSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLDG-----REVRVVGVPTFFSHFG

XP_023511662.1 probable pectinesterase/pectinesterase inhibitor 7 [Cucurbita pepo subsp. pepo]1.5e-0739.47Show/hide
Query:  GPGIFYSLNTNERLP--RVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLDGRE-----VRVVGVP---TFFSH
        G  +F   N   RLP   +  T  SK  +  +S F+FQN  V VS E    KD+V   LGRPWR YST+ F+ESFLD        V   GVP    F++ 
Subjt:  GPGIFYSLNTNERLP--RVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLDGRE-----VRVVGVP---TFFSH

Query:  FGLTQLHAPHSHRL
        F      A  +HR+
Subjt:  FGLTQLHAPHSHRL

XP_038889244.1 probable pectinesterase/pectinesterase inhibitor 39 [Benincasa hispida]5.4e-1051.95Show/hide
Query:  GPGIFYSLNTNERLPRVQGTLYSKSDAHKE--SNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD
        G  IF   N   RLP ++ T+ ++S   K+  S F FQN NV VSSE    KD+VM  LGRPWR YS + FIESFLD
Subjt:  GPGIFYSLNTNERLPRVQGTLYSKSDAHKE--SNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD

TrEMBL top hitse value%identityAlignment
A0A6J1D381 Pectinesterase1.5e-1054.67Show/hide
Query:  GPGIFYSLNTNERLPRVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD
        G  IF   N   R+     T  SKS   + S FTFQN NV VS E Q  KDQV  SLGRPWR+YST+ F+ESFLD
Subjt:  GPGIFYSLNTNERLPRVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD

A0A6J1GIG0 Pectinesterase2.7e-0737.5Show/hide
Query:  IFYSLNTNERLPRVQGTL--YSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLDG-----REVRVVGVPTFFSHFG
        +F   N   RL  +  T+   SK++  ++S F FQN  V VS E    +D+V+  LGRPWR+YS + F+ESFLD        +  +GVP    ++G
Subjt:  IFYSLNTNERLPRVQGTL--YSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLDG-----REVRVVGVPTFFSHFG

A0A6J1GM54 Pectinesterase2.1e-0745.45Show/hide
Query:  GPGIFYSLNTNERLP--RVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD
        G  +F   N   RLP   +  T  SK  +  +S F+FQN  V VS E    K +V   LGRPWR YST+ F+ESFLD
Subjt:  GPGIFYSLNTNERLP--RVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD

A0A6J1HZD2 Pectinesterase2.7e-0745.45Show/hide
Query:  GPGIFYSLNTNERLP--RVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD
        G  +F   N   RLP   +  T  SK  +  +S F+FQN  V VS E    K +V   LGRPWR YST+ F+ESFLD
Subjt:  GPGIFYSLNTNERLP--RVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD

A0A6J1KPG6 Pectinesterase4.2e-0838.54Show/hide
Query:  IFYSLNTNERLPRVQGTL--YSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLDG-----REVRVVGVPTFFSHFG
        +F   N   RL  +Q T+   SK++  ++S F FQN  V VS E    +D+V+  LGRPWR+YS + F+ESFLD        +  +GVP    ++G
Subjt:  IFYSLNTNERLPRVQGTL--YSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLDG-----REVRVVGVPTFFSHFG

SwissProt top hitse value%identityAlignment
Q4PT34 Probable pectinesterase 566.4e-0642.86Show/hide
Query:  TLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD
        T  S+ +    S F+FQ  N+  SS+  P K  V   LGRPWR++S + F+ESF+D
Subjt:  TLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD

Arabidopsis top hitse value%identityAlignment
AT1G11370.1 Pectin lyase-like superfamily protein4.5e-0742.86Show/hide
Query:  TLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD
        T  S+ +    S F+FQ  N+  SS+  P K  V   LGRPWR++S + F+ESF+D
Subjt:  TLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD

AT1G11580.1 methylesterase PCR A8.0e-0432.14Show/hide
Query:  TLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD
        T   + D ++ +  + Q   +  SS+  P K  V   LGRPW+ YS    ++SF+D
Subjt:  TLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD

AT3G27980.1 Plant invertase/pectin methylesterase inhibitor superfamily1.2e-0434.62Show/hide
Query:  TLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLDGREVRVVGVPTFFSHFGLTQLH
        T  S++    +S F+ QN N+  SS+       V   LGRPWR +ST+  ++SF+ G  V   G   +    GL+ LH
Subjt:  TLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLDGREVRVVGVPTFFSHFGLTQLH

AT4G02300.1 Plant invertase/pectin methylesterase inhibitor superfamily4.7e-0430Show/hide
Query:  RVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD
        ++  T  S++ + + +  +  N  ++ + +  P K+   A LGRPWR YS    I+SF+D
Subjt:  RVQGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLD

AT4G03930.1 Plant invertase/pectin methylesterase inhibitor superfamily1.6e-0434.62Show/hide
Query:  TLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLDGREVRVVGVPTFFSHFGLTQLH
        T  S+     +S F+ QN N+  SS+       V   LGRPWR +ST+  ++SF+ G  V   G   +    GL+ LH
Subjt:  TLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLDGREVRVVGVPTFFSHFGLTQLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTATGCAAAGAATTGCACAATGCTGTTTAACGAACCAAGCTCGAACCCGGTCCCCGGCTCGACCTAAACTCAAGAGTGAACCTGCACAGGAGGGCAAACTCTCCGA
CGCTCAAGTCAGTGGCGGGTCCGACAATACTCACAACTGGCGGTTACCTTTGTCCTTTTTCATGTCGAACCTGTCGGGATTGAGCAGATCGAACCCGTCCAGGTCGAACT
GGGGCTTTTTACACTTAACCCCACGATGGGCGAAGCAAATCTCCTCGGCAGTTCGAGGTGGACCTGGGATATTTTATTCCTTGAATACCAATGAGCGTCTTCCACGTGTC
CAAGGTACCCTTTATTCCAAATCTGACGCACATAAAGAGAGCAACTTCACCTTCCAAAACTACAACGTAATAGTGTCATCAGAGACACAGCCAGGCAAGGATCAAGTGAT
GGCGTCTCTTGGACGACCATGGAGGAGTTACTCCACCATTACTTTCATTGAGTCTTTCTTGGATGGACGAGAAGTTAGAGTTGTAGGAGTTCCCACCTTCTTCTCACATT
TTGGTCTCACGCAACTTCATGCGCCCCACAGCCATCGTCTTCCTCATGAAGCAGATCTGCAAGCCACCATCCCGCCGCTCACCTTCAAGGCCACCATCCCGTCCCGCTGC
TCACCTCACGAAGCAGATCAGTGCGCCGCTCACCTTCACGCCGCCATCCACGAACCAAAACCAAACCCGTCGCTGTCGCACCCAACTGCCACCACCCTCCCCGCTGGCTG
CAACACGTACCATATCTGCTTGATGTGCCACGTCCCAAACCAGATCTACCGTCCCGTCGCCCGGCCAGATCCACCCAAGGCCGATACGATCCGTCGGCCACCCCAGACCA
GATCCACCTACTGCCGCTTCGATATGTTTCCGATCTACCGCCCAACTTCCATCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTATGCAAAGAATTGCACAATGCTGTTTAACGAACCAAGCTCGAACCCGGTCCCCGGCTCGACCTAAACTCAAGAGTGAACCTGCACAGGAGGGCAAACTCTCCGA
CGCTCAAGTCAGTGGCGGGTCCGACAATACTCACAACTGGCGGTTACCTTTGTCCTTTTTCATGTCGAACCTGTCGGGATTGAGCAGATCGAACCCGTCCAGGTCGAACT
GGGGCTTTTTACACTTAACCCCACGATGGGCGAAGCAAATCTCCTCGGCAGTTCGAGGTGGACCTGGGATATTTTATTCCTTGAATACCAATGAGCGTCTTCCACGTGTC
CAAGGTACCCTTTATTCCAAATCTGACGCACATAAAGAGAGCAACTTCACCTTCCAAAACTACAACGTAATAGTGTCATCAGAGACACAGCCAGGCAAGGATCAAGTGAT
GGCGTCTCTTGGACGACCATGGAGGAGTTACTCCACCATTACTTTCATTGAGTCTTTCTTGGATGGACGAGAAGTTAGAGTTGTAGGAGTTCCCACCTTCTTCTCACATT
TTGGTCTCACGCAACTTCATGCGCCCCACAGCCATCGTCTTCCTCATGAAGCAGATCTGCAAGCCACCATCCCGCCGCTCACCTTCAAGGCCACCATCCCGTCCCGCTGC
TCACCTCACGAAGCAGATCAGTGCGCCGCTCACCTTCACGCCGCCATCCACGAACCAAAACCAAACCCGTCGCTGTCGCACCCAACTGCCACCACCCTCCCCGCTGGCTG
CAACACGTACCATATCTGCTTGATGTGCCACGTCCCAAACCAGATCTACCGTCCCGTCGCCCGGCCAGATCCACCCAAGGCCGATACGATCCGTCGGCCACCCCAGACCA
GATCCACCTACTGCCGCTTCGATATGTTTCCGATCTACCGCCCAACTTCCATCTTCTAG
Protein sequenceShow/hide protein sequence
MFMQRIAQCCLTNQARTRSPARPKLKSEPAQEGKLSDAQVSGGSDNTHNWRLPLSFFMSNLSGLSRSNPSRSNWGFLHLTPRWAKQISSAVRGGPGIFYSLNTNERLPRV
QGTLYSKSDAHKESNFTFQNYNVIVSSETQPGKDQVMASLGRPWRSYSTITFIESFLDGREVRVVGVPTFFSHFGLTQLHAPHSHRLPHEADLQATIPPLTFKATIPSRC
SPHEADQCAAHLHAAIHEPKPNPSLSHPTATTLPAGCNTYHICLMCHVPNQIYRPVARPDPPKADTIRRPPQTRSTYCRFDMFPIYRPTSIF