; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g12700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g12700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDUF4219 domain-containing protein
Genome locationchr9:10844378..10845163
RNA-Seq ExpressionMoc09g12700
SyntenyMoc09g12700
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV62041.1 DUF4219 domain-containing protein/UBN2 domain-containing protein [Cephalotus follicularis]1.2e-6050.37Show/hide
Query:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS
        +EGCD+WEA+E+DYE+APLP+NPT++QIK +KER+TRKAKA++CLY  VSPAIFNRI+                                      MK+S
Subjt:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS

Query:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQR----------------------------
        E+IKE SDKLI IAN+AR LGT L DNRLVQKILVS+PER+EATIASLENTKDLS++K+ E++SALQAQEQR                            
Subjt:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQR----------------------------

Query:  -------SSSSESAAKDVG-----------SACKHCEKHNHPHFRCWRRPNVKCRRCNLLGHIERFCK
               S  SE+AA +             S+C+HC K NHPHFRCW+RP+V+CR+C+ LGHIERFCK
Subjt:  -------SSSSESAAKDVG-----------SACKHCEKHNHPHFRCWRRPNVKCRRCNLLGHIERFCK

XP_016669911.2 uncharacterized protein LOC107889873 [Gossypium hirsutum]2.1e-6253.41Show/hide
Query:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS
        MEGCDYWEAIEEDYE+ PLP+NPTM+QIK+HKER  RKAKAR+CLY +VSPAIFNRIM                                      MK+S
Subjt:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS

Query:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQR----------------------------
        ESIKE SDKLI IANK RA G  L D+RLVQKILVSVPE+YEATIAS ENTKDL++LKV+E++SALQAQEQR                            
Subjt:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQR----------------------------

Query:  -----------SSSSESAAKDVG-------SACKHCEKHNHPHFRCWRRPNVKCRRCNLLGHIE
                   +S SE+ AK          S+CK+C KHNHPHFRCWRRP+VKC RCNL+GHIE
Subjt:  -----------SSSSESAAKDVG-------SACKHCEKHNHPHFRCWRRPNVKCRRCNLLGHIE

XP_016747159.2 uncharacterized protein LOC107955882 [Gossypium hirsutum]5.8e-6049.82Show/hide
Query:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS
        MEGCDYWE IEEDYE+ PLP NPTM+QIK+H ER TRK KAR+CLY +VSPAIFNRIM                                      +K+S
Subjt:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS

Query:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQR----------------------------
        ESIKE SDKLI IANK R LG  L D++LVQKIL+SV E+YEATI S ENTKDL++L+V+E++SALQA+E R                            
Subjt:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQR----------------------------

Query:  -----------SSSSESAAK-------DVGSACKHCEKHNHPHFRCWRRPNVKCRRCNLLGHIERFCKGAK
                   +S  E+ AK       +  S+CK+C K NHPHFRCWRRP+VKCRRCNL+GHIERFCK +K
Subjt:  -----------SSSSESAAK-------DVGSACKHCEKHNHPHFRCWRRPNVKCRRCNLLGHIERFCKGAK

XP_022148138.1 uncharacterized protein LOC111016891 [Momordica charantia]5.8e-7663.98Show/hide
Query:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS
        MEGCDYWEAI++DYEIAP+PDNPTMH+I  HKERVTRK KA ACL  AVSPAIFNRIM                                      MKDS
Subjt:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS

Query:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQR----------------------------
        ESIKE SDKLIGIANKARALGT L  NRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVS LQAQEQR                            
Subjt:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQR----------------------------

Query:  -------SSSSESAAKDVGSACKHCEKHNHPHFRCWRRPNVKCRRCNLLGHIERFCKGAKT
               SSSSE A+KDVGSACKHC KHNHPHFRCWRRP VKCR CNLLGHIERF KGAKT
Subjt:  -------SSSSESAAKDVGSACKHCEKHNHPHFRCWRRPNVKCRRCNLLGHIERFCKGAKT

XP_022158688.1 uncharacterized protein LOC111025149 [Momordica charantia]3.5e-6564.6Show/hide
Query:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS
        MEGCDYWEAIE+DYEIAPLPDNPTMHQIK HKERVTRKAKARACLY AVSPAIFNRIM                                      MKDS
Subjt:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS

Query:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQRSSSSESAAKDVGSACKHCEKHNHPHFRC
        ESIKE SDKLIGIANKARALG  L +NRLVQKI+VSVPERYEATIASLEN+KDL+KLKVIEVVSALQAQ QR                          RC
Subjt:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQRSSSSESAAKDVGSACKHCEKHNHPHFRC

Query:  WRRPNVKCRRCNLLGHIERFCKGAKT
        WRRP+VK RRC+LLGHIERFCK AKT
Subjt:  WRRPNVKCRRCNLLGHIERFCKGAKT

TrEMBL top hitse value%identityAlignment
A0A1Q3B201 DUF4219 domain-containing protein/UBN2 domain-containing protein5.7e-6150.37Show/hide
Query:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS
        +EGCD+WEA+E+DYE+APLP+NPT++QIK +KER+TRKAKA++CLY  VSPAIFNRI+                                      MK+S
Subjt:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS

Query:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQR----------------------------
        E+IKE SDKLI IAN+AR LGT L DNRLVQKILVS+PER+EATIASLENTKDLS++K+ E++SALQAQEQR                            
Subjt:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQR----------------------------

Query:  -------SSSSESAAKDVG-----------SACKHCEKHNHPHFRCWRRPNVKCRRCNLLGHIERFCK
               S  SE+AA +             S+C+HC K NHPHFRCW+RP+V+CR+C+ LGHIERFCK
Subjt:  -------SSSSESAAKDVG-----------SACKHCEKHNHPHFRCWRRPNVKCRRCNLLGHIERFCK

A0A1U8HV73 uncharacterized protein LOC1078898731.0e-6253.41Show/hide
Query:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS
        MEGCDYWEAIEEDYE+ PLP+NPTM+QIK+HKER  RKAKAR+CLY +VSPAIFNRIM                                      MK+S
Subjt:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS

Query:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQR----------------------------
        ESIKE SDKLI IANK RA G  L D+RLVQKILVSVPE+YEATIAS ENTKDL++LKV+E++SALQAQEQR                            
Subjt:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQR----------------------------

Query:  -----------SSSSESAAKDVG-------SACKHCEKHNHPHFRCWRRPNVKCRRCNLLGHIE
                   +S SE+ AK          S+CK+C KHNHPHFRCWRRP+VKC RCNL+GHIE
Subjt:  -----------SSSSESAAKDVG-------SACKHCEKHNHPHFRCWRRPNVKCRRCNLLGHIE

A0A1U8PA84 uncharacterized protein LOC1079558828.2e-6049.45Show/hide
Query:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS
        MEGCDYWE IEEDYE+ PLP NPTM+QIK+H ER TRK KAR+CLY +VSPAIFNRIM                                      +K+S
Subjt:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS

Query:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQR----------------------------
        +SIKE SDKLI IANK R LG  L D++LVQKIL+SV E+YEATI S ENTKDL++L+V+E++SALQA+E R                            
Subjt:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQR----------------------------

Query:  -----------SSSSESAAK-------DVGSACKHCEKHNHPHFRCWRRPNVKCRRCNLLGHIERFCKGAK
                   +S  E+ AK       +  S+CK+C K NHPHFRCWRRP+VKCRRCNL+GHIERFCK +K
Subjt:  -----------SSSSESAAK-------DVGSACKHCEKHNHPHFRCWRRPNVKCRRCNLLGHIERFCKGAK

A0A6J1D394 uncharacterized protein LOC1110168912.8e-7663.98Show/hide
Query:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS
        MEGCDYWEAI++DYEIAP+PDNPTMH+I  HKERVTRK KA ACL  AVSPAIFNRIM                                      MKDS
Subjt:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS

Query:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQR----------------------------
        ESIKE SDKLIGIANKARALGT L  NRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVS LQAQEQR                            
Subjt:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQR----------------------------

Query:  -------SSSSESAAKDVGSACKHCEKHNHPHFRCWRRPNVKCRRCNLLGHIERFCKGAKT
               SSSSE A+KDVGSACKHC KHNHPHFRCWRRP VKCR CNLLGHIERF KGAKT
Subjt:  -------SSSSESAAKDVGSACKHCEKHNHPHFRCWRRPNVKCRRCNLLGHIERFCKGAKT

A0A6J1DWT9 uncharacterized protein LOC1110251491.7e-6564.6Show/hide
Query:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS
        MEGCDYWEAIE+DYEIAPLPDNPTMHQIK HKERVTRKAKARACLY AVSPAIFNRIM                                      MKDS
Subjt:  MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIM--------------------------------------MKDS

Query:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQRSSSSESAAKDVGSACKHCEKHNHPHFRC
        ESIKE SDKLIGIANKARALG  L +NRLVQKI+VSVPERYEATIASLEN+KDL+KLKVIEVVSALQAQ QR                          RC
Subjt:  ESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASLENTKDLSKLKVIEVVSALQAQEQRSSSSESAAKDVGSACKHCEKHNHPHFRC

Query:  WRRPNVKCRRCNLLGHIERFCKGAKT
        WRRP+VK RRC+LLGHIERFCK AKT
Subjt:  WRRPNVKCRRCNLLGHIERFCKGAKT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGTTGTGATTATTGGGAAGCAATTGAGGAAGATTATGAAATTGCTCCACTTCCTGATAATCCAACAATGCATCAGATCAAGATTCACAAGGAGAGGGTCACCAG
AAAGGCAAAGGCTCGAGCTTGCTTATATGTAGCTGTGTCTCCCGCCATATTCAACAGAATTATGATGAAGGATTCTGAGTCCATCAAAGAGGACTCAGACAAGTTGATCG
GGATTGCTAACAAGGCAAGAGCATTAGGAACTGGTCTATTTGACAATAGATTGGTTCAGAAGATTTTGGTTTCAGTACCTGAGAGATATGAAGCAACCATTGCTTCCTTA
GAGAATACTAAAGACCTCTCCAAACTCAAAGTGATAGAAGTTGTTAGTGCTTTGCAAGCACAAGAGCAAAGGAGCAGTAGCTCAGAATCTGCTGCAAAGGATGTTGGTAG
TGCATGCAAGCACTGCGAGAAGCACAACCATCCACACTTCAGATGCTGGAGAAGACCAAATGTGAAGTGTAGAAGGTGTAATTTATTGGGACACATTGAACGATTTTGTA
AAGGTGCCAAGACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGTTGTGATTATTGGGAAGCAATTGAGGAAGATTATGAAATTGCTCCACTTCCTGATAATCCAACAATGCATCAGATCAAGATTCACAAGGAGAGGGTCACCAG
AAAGGCAAAGGCTCGAGCTTGCTTATATGTAGCTGTGTCTCCCGCCATATTCAACAGAATTATGATGAAGGATTCTGAGTCCATCAAAGAGGACTCAGACAAGTTGATCG
GGATTGCTAACAAGGCAAGAGCATTAGGAACTGGTCTATTTGACAATAGATTGGTTCAGAAGATTTTGGTTTCAGTACCTGAGAGATATGAAGCAACCATTGCTTCCTTA
GAGAATACTAAAGACCTCTCCAAACTCAAAGTGATAGAAGTTGTTAGTGCTTTGCAAGCACAAGAGCAAAGGAGCAGTAGCTCAGAATCTGCTGCAAAGGATGTTGGTAG
TGCATGCAAGCACTGCGAGAAGCACAACCATCCACACTTCAGATGCTGGAGAAGACCAAATGTGAAGTGTAGAAGGTGTAATTTATTGGGACACATTGAACGATTTTGTA
AAGGTGCCAAGACTTAA
Protein sequenceShow/hide protein sequence
MEGCDYWEAIEEDYEIAPLPDNPTMHQIKIHKERVTRKAKARACLYVAVSPAIFNRIMMKDSESIKEDSDKLIGIANKARALGTGLFDNRLVQKILVSVPERYEATIASL
ENTKDLSKLKVIEVVSALQAQEQRSSSSESAAKDVGSACKHCEKHNHPHFRCWRRPNVKCRRCNLLGHIERFCKGAKT