; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g12970 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g12970
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr9:11030881..11033301
RNA-Seq ExpressionMoc09g12970
SyntenyMoc09g12970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6734747.1 hypothetical protein I3842_01G285500 [Carya illinoinensis]2.2e-2446.58Show/hide
Query:  MTTTFNGMQKGEFPSNTEVNPIEYCKAVTLRSGRQLQDLGY-ETIEEPIIC--------IEKKDNSKETVKEA--PPTLEAEKPLLFLLFLTIYPQCFQK
        + TT N  Q+G FPSNTEVNP E CKA+TLRSG++++     E+   P           +E+++   +T++E   PPT+        L     YPQ FQK
Subjt:  MTTTFNGMQKGEFPSNTEVNPIEYCKAVTLRSGRQLQDLGY-ETIEEPIIC--------IEKKDNSKETVKEA--PPTLEAEKPLLFLLFLTIYPQCFQK

Query:  KTVDAQFKKFLDIFKKLNINISFANALEQMPNYVKFMKEMLSNKKK
        + +D QF KFLDIFKK++INI FA+ALEQMPNYVKF+K+++S K++
Subjt:  KTVDAQFKKFLDIFKKLNINISFANALEQMPNYVKFMKEMLSNKKK

KAG7947748.1 hypothetical protein I3843_14G109500 [Carya illinoinensis]2.2e-2446.58Show/hide
Query:  MTTTFNGMQKGEFPSNTEVNPIEYCKAVTLRSGRQLQDLGY-ETIEEPIIC--------IEKKDNSKETVKEA--PPTLEAEKPLLFLLFLTIYPQCFQK
        + TT N  Q+G FPSNTEVNP E CKA+TLRSG++++     E+   P           +E+++   +T++E   PPT+        L     YPQ FQK
Subjt:  MTTTFNGMQKGEFPSNTEVNPIEYCKAVTLRSGRQLQDLGY-ETIEEPIIC--------IEKKDNSKETVKEA--PPTLEAEKPLLFLLFLTIYPQCFQK

Query:  KTVDAQFKKFLDIFKKLNINISFANALEQMPNYVKFMKEMLSNKKK
        + +D QF KFLDIFKK++INI FA+ALEQMPNYVKF+K+++S K++
Subjt:  KTVDAQFKKFLDIFKKLNINISFANALEQMPNYVKFMKEMLSNKKK

KAG7990634.1 hypothetical protein I3843_02G035100 [Carya illinoinensis]5.5e-2345.21Show/hide
Query:  MTTTFNGMQKGEFPSNTEVNPIEYCKAVTLRSGRQLQDLGYE---------TIEEPIICIEKKDNSKETVKEA--PPTLEAEKPLLFLLFLTIYPQCFQK
        + TT N  Q+G FPSNTEVNP E CKA+TLRSG++++    +          I +    +E+ +   +T++E    PT+        L     YPQ FQK
Subjt:  MTTTFNGMQKGEFPSNTEVNPIEYCKAVTLRSGRQLQDLGYE---------TIEEPIICIEKKDNSKETVKEA--PPTLEAEKPLLFLLFLTIYPQCFQK

Query:  KTVDAQFKKFLDIFKKLNINISFANALEQMPNYVKFMKEMLSNKKK
        + +D QF KFLDIFKK++INI FA+ALEQMPNYVKF+K+++S K++
Subjt:  KTVDAQFKKFLDIFKKLNINISFANALEQMPNYVKFMKEMLSNKKK

XP_022157217.1 uncharacterized protein LOC111023979 [Momordica charantia]6.0e-70100Show/hide
Query:  MTTTFNGMQKGEFPSNTEVNPIEYCKAVTLRSGRQLQDLGYETIEEPIICIEKKDNSKETVKEAPPTLEAEKPLLFLLFLTIYPQCFQKKTVDAQFKKFL
        MTTTFNGMQKGEFPSNTEVNPIEYCKAVTLRSGRQLQDLGYETIEEPIICIEKKDNSKETVKEAPPTLEAEKPLLFLLFLTIYPQCFQKKTVDAQFKKFL
Subjt:  MTTTFNGMQKGEFPSNTEVNPIEYCKAVTLRSGRQLQDLGYETIEEPIICIEKKDNSKETVKEAPPTLEAEKPLLFLLFLTIYPQCFQKKTVDAQFKKFL

Query:  DIFKKLNINISFANALEQMPNYVKFMKEMLSNKKKF
        DIFKKLNINISFANALEQMPNYVKFMKEMLSNKKKF
Subjt:  DIFKKLNINISFANALEQMPNYVKFMKEMLSNKKKF

XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber]2.9e-2446.58Show/hide
Query:  MTTTFNGMQKGEFPSNTEVNPIEYCKAVTLRSGRQLQ-DLGYETIEEPII--------CIEKKDNSKETVKEA--PPTLEAEKPLLFLLFLTIYPQCFQK
        + TT N  Q+G FPSNTEVNP E CKA+TLRSGR+++     ET   P           +E+++  ++T++E   PP++        L     YPQ FQK
Subjt:  MTTTFNGMQKGEFPSNTEVNPIEYCKAVTLRSGRQLQ-DLGYETIEEPII--------CIEKKDNSKETVKEA--PPTLEAEKPLLFLLFLTIYPQCFQK

Query:  KTVDAQFKKFLDIFKKLNINISFANALEQMPNYVKFMKEMLSNKKK
        + +D QF KFLDIFKK++INI FA+ALEQMPNY KF+K+++S K++
Subjt:  KTVDAQFKKFLDIFKKLNINISFANALEQMPNYVKFMKEMLSNKKK

TrEMBL top hitse value%identityAlignment
A0A2G9GK35 Reverse transcriptase2.5e-2146.76Show/hide
Query:  MTTTFNGMQKGEFPSNTEVNPIE----YCKAVTLRSGRQLQDLGYETIEEPIICIEKKDNSKETVKEAPPTLEAEKPLLFLLFLTIYPQCFQKKTVDAQF
        +    N   +G  PSNTE NP +     C+AVTLR+GR+LQ    E ++EP    EK+  S+E  KE    LE  KP         +PQ  QK+ ++ QF
Subjt:  MTTTFNGMQKGEFPSNTEVNPIE----YCKAVTLRSGRQLQDLGYETIEEPIICIEKKDNSKETVKEAPPTLEAEKPLLFLLFLTIYPQCFQKKTVDAQF

Query:  KKFLDIFKKLNINISFANALEQMPNYVKFMKEMLSNKKK
         KFL++FKKL+INI FA ALEQMP+YVKFMK++LS K++
Subjt:  KKFLDIFKKLNINISFANALEQMPNYVKFMKEMLSNKKK

A0A2G9HYA0 Reverse transcriptase2.5e-2146.76Show/hide
Query:  MTTTFNGMQKGEFPSNTEVNPIE----YCKAVTLRSGRQLQDLGYETIEEPIICIEKKDNSKETVKEAPPTLEAEKPLLFLLFLTIYPQCFQKKTVDAQF
        +    N   +G  PSNTE NP +     C+AVTLR+GR+LQ    E ++EP    EK+  S+E  KE    LE  KP         +PQ  QK+ ++ QF
Subjt:  MTTTFNGMQKGEFPSNTEVNPIE----YCKAVTLRSGRQLQDLGYETIEEPIICIEKKDNSKETVKEAPPTLEAEKPLLFLLFLTIYPQCFQKKTVDAQF

Query:  KKFLDIFKKLNINISFANALEQMPNYVKFMKEMLSNKKK
         KFL++FKKL+INI FA ALEQMP+YVKFMK++LS K++
Subjt:  KKFLDIFKKLNINISFANALEQMPNYVKFMKEMLSNKKK

A0A2G9HYD8 Reverse transcriptase3.3e-2146.76Show/hide
Query:  MTTTFNGMQKGEFPSNTEVNPIE----YCKAVTLRSGRQLQDLGYETIEEPIICIEKKDNSKETVKEAPPTLEAEKPLLFLLFLTIYPQCFQKKTVDAQF
        +    N   +G  PSNTE NP +     C+AVTLR+GR+LQ    E +++P    EK+  SKE  KE    LE  KP         +PQ  QK+ ++ QF
Subjt:  MTTTFNGMQKGEFPSNTEVNPIE----YCKAVTLRSGRQLQDLGYETIEEPIICIEKKDNSKETVKEAPPTLEAEKPLLFLLFLTIYPQCFQKKTVDAQF

Query:  KKFLDIFKKLNINISFANALEQMPNYVKFMKEMLSNKKK
         KFL++FKKL+INI FA ALEQMP+YVKFMK++LS K++
Subjt:  KKFLDIFKKLNINISFANALEQMPNYVKFMKEMLSNKKK

A0A2P5BPI6 Uncharacterized protein1.0e-2245.77Show/hide
Query:  MTTTFNGMQKGEFPSNTEVNPIEYCKAVTLRSGRQLQDLGYETIEEPIICIEKKDNSKETVKEAPPTLEAEKPLLFLL----FLTI---YPQCFQKKTVD
        +  +  G Q G+FPS+TE NP ++CKA+TLR+G++++      ++E +      D +KE V E PP + ++   +  L     +T    YPQ FQKK +D
Subjt:  MTTTFNGMQKGEFPSNTEVNPIEYCKAVTLRSGRQLQDLGYETIEEPIICIEKKDNSKETVKEAPPTLEAEKPLLFLL----FLTI---YPQCFQKKTVD

Query:  AQFKKFLDIFKKLNINISFANALEQMPNYVKFMKEMLSNKKK
        AQF K L+IFKKL INI FA+ALEQMPNYVKFMK+++S K++
Subjt:  AQFKKFLDIFKKLNINISFANALEQMPNYVKFMKEMLSNKKK

A0A6J1DTZ8 uncharacterized protein LOC1110239792.9e-70100Show/hide
Query:  MTTTFNGMQKGEFPSNTEVNPIEYCKAVTLRSGRQLQDLGYETIEEPIICIEKKDNSKETVKEAPPTLEAEKPLLFLLFLTIYPQCFQKKTVDAQFKKFL
        MTTTFNGMQKGEFPSNTEVNPIEYCKAVTLRSGRQLQDLGYETIEEPIICIEKKDNSKETVKEAPPTLEAEKPLLFLLFLTIYPQCFQKKTVDAQFKKFL
Subjt:  MTTTFNGMQKGEFPSNTEVNPIEYCKAVTLRSGRQLQDLGYETIEEPIICIEKKDNSKETVKEAPPTLEAEKPLLFLLFLTIYPQCFQKKTVDAQFKKFL

Query:  DIFKKLNINISFANALEQMPNYVKFMKEMLSNKKKF
        DIFKKLNINISFANALEQMPNYVKFMKEMLSNKKKF
Subjt:  DIFKKLNINISFANALEQMPNYVKFMKEMLSNKKKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACCACTTTCAATGGTATGCAAAAGGGGGAATTTCCAAGCAATACTGAGGTAAACCCAATTGAGTACTGCAAGGCAGTGACTTTGAGAAGTGGAAGACAA
CTCCAAGATCTTGGATATGAAACAATTGAGGAGCCAATAATCTGTATTGAGAAAAAAGACAATTCAAAGGAGACAGTGAAGGAAGCACCACCAACTCTCGAGGCT
GAAAAGCCACTACTCTTCCTACTATTCCTAACAATTTATCCTCAATGTTTTCAAAAGAAAACGGTTGATGCTCAATTCAAAAAATTCTTGGACATATTTAAAAAG
CTTAATATTAACATTTCTTTTGCAAATGCACTGGAGCAGATGCCCAATTATGTCAAATTTATGAAGGAGATGCTCTCTAACAAGAAGAAATTTACTTGTGGAAAA
ATCGAAATCAGCTTAGCAATAGATTTGTTCTTGTTGGATTTTTCTTGTACCATGAGTCCCAAGCGTGCTAGACGTGTCACATTATCAAAGGGAAATTTTGATCCC
CACCATTTTGTTTCAAAAGCGGCCATTGATTTGTATCACCGGTATGTTGTGGAGCGTACGGTAGTTCAAGAGCGAGGGTTGGCACCATATGGTGACCATCACGTC
CCTGTTGACTCCAATACTATAAATCAGTATTATCACTTGCACGGGTTTGAGCGGGATGAATGCAATCGTGATGCCATCGCCACAGGGAGGACGATAGATGTGGGT
ACAGTAATTTTGCAGTCAATACACCACATAAGACATGGTGCCACTACTGTTGGAGGTCTCGACCATGGGTCATTGATTACTGCATTATGTCGGGTAATCCTGTGC
CAGAACCTTGTAGAGCTGGGACCATCTACAGTCAAGCCAGCCCAACGCTCCAGTGATGATCGACATCATCACATGGCACAATATTTGCGGTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTACCACTTTCAATGGTATGCAAAAGGGGGAATTTCCAAGCAATACTGAGGTAAACCCAATTGAGTACTGCAAGGCAGTGACTTTGAGAAGTGGAAGACAA
CTCCAAGATCTTGGATATGAAACAATTGAGGAGCCAATAATCTGTATTGAGAAAAAAGACAATTCAAAGGAGACAGTGAAGGAAGCACCACCAACTCTCGAGGCT
GAAAAGCCACTACTCTTCCTACTATTCCTAACAATTTATCCTCAATGTTTTCAAAAGAAAACGGTTGATGCTCAATTCAAAAAATTCTTGGACATATTTAAAAAG
CTTAATATTAACATTTCTTTTGCAAATGCACTGGAGCAGATGCCCAATTATGTCAAATTTATGAAGGAGATGCTCTCTAACAAGAAGAAATTTACTTGTGGAAAA
ATCGAAATCAGCTTAGCAATAGATTTGTTCTTGTTGGATTTTTCTTGTACCATGAGTCCCAAGCGTGCTAGACGTGTCACATTATCAAAGGGAAATTTTGATCCC
CACCATTTTGTTTCAAAAGCGGCCATTGATTTGTATCACCGGTATGTTGTGGAGCGTACGGTAGTTCAAGAGCGAGGGTTGGCACCATATGGTGACCATCACGTC
CCTGTTGACTCCAATACTATAAATCAGTATTATCACTTGCACGGGTTTGAGCGGGATGAATGCAATCGTGATGCCATCGCCACAGGGAGGACGATAGATGTGGGT
ACAGTAATTTTGCAGTCAATACACCACATAAGACATGGTGCCACTACTGTTGGAGGTCTCGACCATGGGTCATTGATTACTGCATTATGTCGGGTAATCCTGTGC
CAGAACCTTGTAGAGCTGGGACCATCTACAGTCAAGCCAGCCCAACGCTCCAGTGATGATCGACATCATCACATGGCACAATATTTGCGGTGCTAG
Protein sequenceShow/hide protein sequence
MTTTFNGMQKGEFPSNTEVNPIEYCKAVTLRSGRQLQDLGYETIEEPIICIEKKDNSKETVKEAPPTLEAEKPLLFLLFLTIYPQCFQKKTVDAQFKKFLDIFKK
LNINISFANALEQMPNYVKFMKEMLSNKKKFTCGKIEISLAIDLFLLDFSCTMSPKRARRVTLSKGNFDPHHFVSKAAIDLYHRYVVERTVVQERGLAPYGDHHV
PVDSNTINQYYHLHGFERDECNRDAIATGRTIDVGTVILQSIHHIRHGATTVGGLDHGSLITALCRVILCQNLVELGPSTVKPAQRSSDDRHHHMAQYLRC