; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g13530 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g13530
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr9:11453092..11462854
RNA-Seq ExpressionMoc09g13530
SyntenyMoc09g13530
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153146.1 uncharacterized protein LOC111020715 [Momordica charantia]1.8e-2276.54Show/hide
Query:  LDEEGDYEAEYWNDDNDDALDGESEPNVEQVHTEINRDETAVRQMGCDGLSGQSNDEKLQLILQSSGTHDVKEGEVFDTNE
        + EEGDYEAE+ NDD DDALD ESEP+VEQVH EI RDE AV+QMGCDGL+GQ N E LQLI+QSSGT+DVKEGEVFDT +
Subjt:  LDEEGDYEAEYWNDDNDDALDGESEPNVEQVHTEINRDETAVRQMGCDGLSGQSNDEKLQLILQSSGTHDVKEGEVFDTNE

XP_022154947.1 uncharacterized protein LOC111022090 [Momordica charantia]4.9e-3666.15Show/hide
Query:  RPTYSIPSFPSSSSNPSFSQQPHPYYAHIGHDITGLTPLQLDVVPCNLRDDRVYDWDVSGLWNDNENESDKSNVPLGESEEGDYKAEYGNDDNDDALDEE
        RPT  IPSFPSSSSNPS SQQPHPYY H+GHDI GLTPL+ DVVPCNL DDRV DW+V GLWNDN++ESD+S  PLGESEEGDY+AE+ NDD DDALDE 
Subjt:  RPTYSIPSFPSSSSNPSFSQQPHPYYAHIGHDITGLTPLQLDVVPCNLRDDRVYDWDVSGLWNDNENESDKSNVPLGESEEGDYKAEYGNDDNDDALDEE

Query:  GDYEAEYWNDDNDDALDGESEPNVEQVHTE
                          ESEP+VEQV  +
Subjt:  GDYEAEYWNDDNDDALDGESEPNVEQVHTE

XP_022155970.1 uncharacterized protein LOC111022954 [Momordica charantia]1.1e-5164.97Show/hide
Query:  RPTYSIPSFPSSSSNPSFSQQPHPYYAHIGHDITGLTPLQLDVVPCNLRDDRVYDWDVSGLWNDNENESDKSNVPLGESEEGDYKAEYGNDDNDDALDEE
        RPT  IPSFPSSSSNPS SQQPH YY H+GHDI GLTPL+ DVVPCNL DDRV  W++ GLWNDN++ESD+S   LG+SEEGDY+AE+ NDD DDA DE 
Subjt:  RPTYSIPSFPSSSSNPSFSQQPHPYYAHIGHDITGLTPLQLDVVPCNLRDDRVYDWDVSGLWNDNENESDKSNVPLGESEEGDYKAEYGNDDNDDALDEE

Query:  GDYEAEYWNDDNDDALDGESEPNVEQVHTEINRDETAVRQMGCDGLSGQSNDEKLQLILQSSGTHDVKEGEVFDTNE
                          + EP+VEQV  EI RDE  V QMGCDGL GQ NDEKLQLI+QSSGT+DVKEG+VFDT +
Subjt:  GDYEAEYWNDDNDDALDGESEPNVEQVHTEINRDETAVRQMGCDGLSGQSNDEKLQLILQSSGTHDVKEGEVFDTNE

XP_022156328.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia]8.6e-3354.19Show/hide
Query:  HPYYAHIGHDITGLTPLQLDVVPCNLRDDRVYDWDVSGLWNDNENESDKSNVPLGESEEGDYKAEYGNDDNDDALDEEGDYEAEYWNDDNDDALDGESEP
        H     I   ++     Q +VVPCNL DDRV DWDV G+WNDNE+ES +S  PL ES+EG  +AEYGN+++DDALD+                   E EP
Subjt:  HPYYAHIGHDITGLTPLQLDVVPCNLRDDRVYDWDVSGLWNDNENESDKSNVPLGESEEGDYKAEYGNDDNDDALDEEGDYEAEYWNDDNDDALDGESEP

Query:  NVEQVHTEINRDETAVRQMGCDGLSGQSNDEKLQLILQSSGTHDVKEGEVFDTNE
        +VEQVHTEI RDE AVR  GC+GL+G  NDEKLQLI+QSSGT+DV EG+VFD  +
Subjt:  NVEQVHTEINRDETAVRQMGCDGLSGQSNDEKLQLILQSSGTHDVKEGEVFDTNE

XP_022157017.1 uncharacterized protein LOC111023843 [Momordica charantia]7.6e-3760.14Show/hide
Query:  GHDITGLTPLQLDVVPCNLRDDRVYDWDVSGLWNDNENESDKSNVPLGESEEGDYKAEYGNDDNDDALDEEGDYEAEYWNDDNDDALDGESEPNVEQVHT
        GHD+ GLTPL  DVVPCNL DDRV DWDV G+WNDNE+ES +S  PL  SEEG  +AEYGN+++DDALD+                   E E +VEQVHT
Subjt:  GHDITGLTPLQLDVVPCNLRDDRVYDWDVSGLWNDNENESDKSNVPLGESEEGDYKAEYGNDDNDDALDEEGDYEAEYWNDDNDDALDGESEPNVEQVHT

Query:  EINRDETAVRQMGCDGLSGQSNDEKLQLILQSSGTHDVKEGEVFDTNE
        EI RDE AVR  GC+GL+G  NDEKLQLI+QSSGT+DV EG+VFD  +
Subjt:  EINRDETAVRQMGCDGLSGQSNDEKLQLILQSSGTHDVKEGEVFDTNE

TrEMBL top hitse value%identityAlignment
A0A6J1DJT1 uncharacterized protein LOC1110207158.8e-2376.54Show/hide
Query:  LDEEGDYEAEYWNDDNDDALDGESEPNVEQVHTEINRDETAVRQMGCDGLSGQSNDEKLQLILQSSGTHDVKEGEVFDTNE
        + EEGDYEAE+ NDD DDALD ESEP+VEQVH EI RDE AV+QMGCDGL+GQ N E LQLI+QSSGT+DVKEGEVFDT +
Subjt:  LDEEGDYEAEYWNDDNDDALDGESEPNVEQVHTEINRDETAVRQMGCDGLSGQSNDEKLQLILQSSGTHDVKEGEVFDTNE

A0A6J1DN26 uncharacterized protein LOC1110220902.4e-3666.15Show/hide
Query:  RPTYSIPSFPSSSSNPSFSQQPHPYYAHIGHDITGLTPLQLDVVPCNLRDDRVYDWDVSGLWNDNENESDKSNVPLGESEEGDYKAEYGNDDNDDALDEE
        RPT  IPSFPSSSSNPS SQQPHPYY H+GHDI GLTPL+ DVVPCNL DDRV DW+V GLWNDN++ESD+S  PLGESEEGDY+AE+ NDD DDALDE 
Subjt:  RPTYSIPSFPSSSSNPSFSQQPHPYYAHIGHDITGLTPLQLDVVPCNLRDDRVYDWDVSGLWNDNENESDKSNVPLGESEEGDYKAEYGNDDNDDALDEE

Query:  GDYEAEYWNDDNDDALDGESEPNVEQVHTE
                          ESEP+VEQV  +
Subjt:  GDYEAEYWNDDNDDALDGESEPNVEQVHTE

A0A6J1DP00 uncharacterized protein LOC1110229545.3e-5264.97Show/hide
Query:  RPTYSIPSFPSSSSNPSFSQQPHPYYAHIGHDITGLTPLQLDVVPCNLRDDRVYDWDVSGLWNDNENESDKSNVPLGESEEGDYKAEYGNDDNDDALDEE
        RPT  IPSFPSSSSNPS SQQPH YY H+GHDI GLTPL+ DVVPCNL DDRV  W++ GLWNDN++ESD+S   LG+SEEGDY+AE+ NDD DDA DE 
Subjt:  RPTYSIPSFPSSSSNPSFSQQPHPYYAHIGHDITGLTPLQLDVVPCNLRDDRVYDWDVSGLWNDNENESDKSNVPLGESEEGDYKAEYGNDDNDDALDEE

Query:  GDYEAEYWNDDNDDALDGESEPNVEQVHTEINRDETAVRQMGCDGLSGQSNDEKLQLILQSSGTHDVKEGEVFDTNE
                          + EP+VEQV  EI RDE  V QMGCDGL GQ NDEKLQLI+QSSGT+DVKEG+VFDT +
Subjt:  GDYEAEYWNDDNDDALDGESEPNVEQVHTEINRDETAVRQMGCDGLSGQSNDEKLQLILQSSGTHDVKEGEVFDTNE

A0A6J1DQB9 Reverse transcriptase4.2e-3354.19Show/hide
Query:  HPYYAHIGHDITGLTPLQLDVVPCNLRDDRVYDWDVSGLWNDNENESDKSNVPLGESEEGDYKAEYGNDDNDDALDEEGDYEAEYWNDDNDDALDGESEP
        H     I   ++     Q +VVPCNL DDRV DWDV G+WNDNE+ES +S  PL ES+EG  +AEYGN+++DDALD+                   E EP
Subjt:  HPYYAHIGHDITGLTPLQLDVVPCNLRDDRVYDWDVSGLWNDNENESDKSNVPLGESEEGDYKAEYGNDDNDDALDEEGDYEAEYWNDDNDDALDGESEP

Query:  NVEQVHTEINRDETAVRQMGCDGLSGQSNDEKLQLILQSSGTHDVKEGEVFDTNE
        +VEQVHTEI RDE AVR  GC+GL+G  NDEKLQLI+QSSGT+DV EG+VFD  +
Subjt:  NVEQVHTEINRDETAVRQMGCDGLSGQSNDEKLQLILQSSGTHDVKEGEVFDTNE

A0A6J1DTG5 uncharacterized protein LOC1110238433.7e-3760.14Show/hide
Query:  GHDITGLTPLQLDVVPCNLRDDRVYDWDVSGLWNDNENESDKSNVPLGESEEGDYKAEYGNDDNDDALDEEGDYEAEYWNDDNDDALDGESEPNVEQVHT
        GHD+ GLTPL  DVVPCNL DDRV DWDV G+WNDNE+ES +S  PL  SEEG  +AEYGN+++DDALD+                   E E +VEQVHT
Subjt:  GHDITGLTPLQLDVVPCNLRDDRVYDWDVSGLWNDNENESDKSNVPLGESEEGDYKAEYGNDDNDDALDEEGDYEAEYWNDDNDDALDGESEPNVEQVHT

Query:  EINRDETAVRQMGCDGLSGQSNDEKLQLILQSSGTHDVKEGEVFDTNE
        EI RDE AVR  GC+GL+G  NDEKLQLI+QSSGT+DV EG+VFD  +
Subjt:  EINRDETAVRQMGCDGLSGQSNDEKLQLILQSSGTHDVKEGEVFDTNE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAGAAGATGCCCACGGACTCTTTTGTTGTCTTTCTTGAATTTGTCAGTTTCAATGATAGTGGTAGCAGACGTCCCGGGATCAGCAACGATGATGGAAGCGACAG
TGGCAGCAGCAATAACGACAAGTTGATTAGTGATGATGGAAGCGGCAGTGGCCACATGCTTAGAAGGAGTAGGAAGAAGAAAGAATGGTGCGGGTGGCCGACGAGGAAGG
ACGTCGGTTGGGATGACAGGGTCACACCGAGATGTACGGTGCCTGACAAGAGAATGTACGCCCCCGGCAACCAGTGGATGGCACCTACACCTGCAGGCTTGAAACCTGTC
TCTTGCGAGTGCCAGGTCACACTGCTCGGCATGCTTCTCGTACAATACAGGTTTAGTCCTCTTTCGAGGTCAAGCGCTACCCTGCCAGGGGGGTTGGGTCTCGAATGCGT
TGAAGTAAACGGGGGCGTGCAGTCTGATTGGGAAGGCATATGTCGTAGAGAATCTTTTCGAATCAAGTGTGGGGCCCAAGTGGATCAAGAGGTCCATCATACTGCCGCAT
TTATGAGAGGACACATGTCTGTCGCCGTTTCACGAGTCATCGCGAATATTCCCTTCATGAGCAACCGCGCTTCAGTGACTCATGTCCCGCCGCTCGCTACAGAGCAAGAC
GTCTTAGACATTCGTTCGACGTATCATGTTCCCTACTACGTTCTCATTCGTTTGCCTACAGTGGATGAGAGGATTGACTCCCCTCTCCTTGGATGGGTGGGTTTCTATCC
CCAAATATTCTTCAATGCGAGACCCACATATTCTATACCTTCATTTCCTTCCTCATCATCGAACCCTTCTTTTTCCCAACAGCCACACCCCTACTACGCCCATATAGGTC
ACGATATAACGGGTTTAACACCATTGCAACTAGATGTTGTTCCATGTAACCTAAGAGATGACAGGGTATATGATTGGGATGTGTCGGGATTGTGGAATGATAACGAAAAT
GAAAGTGATAAATCAAATGTACCGTTGGGAGAGTCAGAAGAAGGAGACTATAAAGCAGAATATGGGAATGATGACAATGACGATGCACTTGATGAAGAAGGAGACTATGA
AGCAGAATATTGGAATGATGACAATGACGATGCACTTGATGGAGAGTCTGAGCCCAATGTGGAACAGGTACACACTGAGATTAACAGGGATGAAACAGCGGTCCGACAAA
TGGGGTGTGATGGTCTCAGTGGACAGTCTAATGATGAGAAATTGCAACTCATACTACAGTCTTCTGGGACACATGATGTTAAGGAAGGTGAAGTATTTGATACGAATGAA
GGAGTTGAATTTGAAAATGCATTTAGTTGCAATGCGGATGAATTTTCAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAGAAGATGCCCACGGACTCTTTTGTTGTCTTTCTTGAATTTGTCAGTTTCAATGATAGTGGTAGCAGACGTCCCGGGATCAGCAACGATGATGGAAGCGACAG
TGGCAGCAGCAATAACGACAAGTTGATTAGTGATGATGGAAGCGGCAGTGGCCACATGCTTAGAAGGAGTAGGAAGAAGAAAGAATGGTGCGGGTGGCCGACGAGGAAGG
ACGTCGGTTGGGATGACAGGGTCACACCGAGATGTACGGTGCCTGACAAGAGAATGTACGCCCCCGGCAACCAGTGGATGGCACCTACACCTGCAGGCTTGAAACCTGTC
TCTTGCGAGTGCCAGGTCACACTGCTCGGCATGCTTCTCGTACAATACAGGTTTAGTCCTCTTTCGAGGTCAAGCGCTACCCTGCCAGGGGGGTTGGGTCTCGAATGCGT
TGAAGTAAACGGGGGCGTGCAGTCTGATTGGGAAGGCATATGTCGTAGAGAATCTTTTCGAATCAAGTGTGGGGCCCAAGTGGATCAAGAGGTCCATCATACTGCCGCAT
TTATGAGAGGACACATGTCTGTCGCCGTTTCACGAGTCATCGCGAATATTCCCTTCATGAGCAACCGCGCTTCAGTGACTCATGTCCCGCCGCTCGCTACAGAGCAAGAC
GTCTTAGACATTCGTTCGACGTATCATGTTCCCTACTACGTTCTCATTCGTTTGCCTACAGTGGATGAGAGGATTGACTCCCCTCTCCTTGGATGGGTGGGTTTCTATCC
CCAAATATTCTTCAATGCGAGACCCACATATTCTATACCTTCATTTCCTTCCTCATCATCGAACCCTTCTTTTTCCCAACAGCCACACCCCTACTACGCCCATATAGGTC
ACGATATAACGGGTTTAACACCATTGCAACTAGATGTTGTTCCATGTAACCTAAGAGATGACAGGGTATATGATTGGGATGTGTCGGGATTGTGGAATGATAACGAAAAT
GAAAGTGATAAATCAAATGTACCGTTGGGAGAGTCAGAAGAAGGAGACTATAAAGCAGAATATGGGAATGATGACAATGACGATGCACTTGATGAAGAAGGAGACTATGA
AGCAGAATATTGGAATGATGACAATGACGATGCACTTGATGGAGAGTCTGAGCCCAATGTGGAACAGGTACACACTGAGATTAACAGGGATGAAACAGCGGTCCGACAAA
TGGGGTGTGATGGTCTCAGTGGACAGTCTAATGATGAGAAATTGCAACTCATACTACAGTCTTCTGGGACACATGATGTTAAGGAAGGTGAAGTATTTGATACGAATGAA
GGAGTTGAATTTGAAAATGCATTTAGTTGCAATGCGGATGAATTTTCAATTTAA
Protein sequenceShow/hide protein sequence
MVEKMPTDSFVVFLEFVSFNDSGSRRPGISNDDGSDSGSSNNDKLISDDGSGSGHMLRRSRKKKEWCGWPTRKDVGWDDRVTPRCTVPDKRMYAPGNQWMAPTPAGLKPV
SCECQVTLLGMLLVQYRFSPLSRSSATLPGGLGLECVEVNGGVQSDWEGICRRESFRIKCGAQVDQEVHHTAAFMRGHMSVAVSRVIANIPFMSNRASVTHVPPLATEQD
VLDIRSTYHVPYYVLIRLPTVDERIDSPLLGWVGFYPQIFFNARPTYSIPSFPSSSSNPSFSQQPHPYYAHIGHDITGLTPLQLDVVPCNLRDDRVYDWDVSGLWNDNEN
ESDKSNVPLGESEEGDYKAEYGNDDNDDALDEEGDYEAEYWNDDNDDALDGESEPNVEQVHTEINRDETAVRQMGCDGLSGQSNDEKLQLILQSSGTHDVKEGEVFDTNE
GVEFENAFSCNADEFSI