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Moc09g13980 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g13980
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr9:11928583..11929683
RNA-Seq ExpressionMoc09g13980
SyntenyMoc09g13980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154406.1 uncharacterized protein LOC111021683 [Momordica charantia]3.1e-1250.54Show/hide
Query:  MEEMYNEIIRANQMESHSKAPGRADNLLEEGDELDPPINPDDYESVADNGGIDYSLRDHDIRKHLVDRKRMASRGPGISPSYSQIYSNSDLKA
        ME+MY E  RAN+  S S APG        G++  P I P D E + ++GG+DYSLRD+D+RKHL ++K+ ASR P  S SYS+ +SNS+LKA
Subjt:  MEEMYNEIIRANQMESHSKAPGRADNLLEEGDELDPPINPDDYESVADNGGIDYSLRDHDIRKHLVDRKRMASRGPGISPSYSQIYSNSDLKA

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]1.5e-0650.79Show/hide
Query:  GDELDPPINPDDYESVADNGGIDYSLRDHDIRKHLVDRKRMASRGPGISPSYSQIYSNSDLKA
        G++  P I P + E + ++ G+DYSLRD+D+RKHL D+K+ AS  P  S SYS+ +SNS+LKA
Subjt:  GDELDPPINPDDYESVADNGGIDYSLRDHDIRKHLVDRKRMASRGPGISPSYSQIYSNSDLKA

XP_022156638.1 uncharacterized protein LOC111023488 [Momordica charantia]1.1e-1441.54Show/hide
Query:  VEPPRRSTRNANTVLPPAYSRHNKTNRGRGGASKKVSRKVASAAEPEVLATLQRELDDIRNRVRTMEEMYNEIIRANQMESHSKAPGRADNLLEEGDELD
        V+PPRRSTRNANT+LPPA+ R  K NRGRGG +                                                        D+L E+GD+LD
Subjt:  VEPPRRSTRNANTVLPPAYSRHNKTNRGRGGASKKVSRKVASAAEPEVLATLQRELDDIRNRVRTMEEMYNEIIRANQMESHSKAPGRADNLLEEGDELD

Query:  PPINPDDYESVADNGGIDYSLRDHDIRKHL
        PPI+PDDYE   +N GIDYSLRDHD+RKHL
Subjt:  PPINPDDYESVADNGGIDYSLRDHDIRKHL

XP_022157193.1 uncharacterized protein LOC111023967 [Momordica charantia]1.1e-0452Show/hide
Query:  MEEMYNEIIRANQMESHSKAPGRADNLLEEGDELDPPINPDDYESVADNG
        MEE YN+++  N++ S S  PG  D+LL++GD+ D P +PDDYE +ADNG
Subjt:  MEEMYNEIIRANQMESHSKAPGRADNLLEEGDELDPPINPDDYESVADNG

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]1.3e-0534.39Show/hide
Query:  EPPRRSTRNANTVLPPAYSRHNKTNRGRGGASKKVSRKVASAAEPEVLATLQRELDDIRNRVRTMEEMYNEIIRANQMESHSKAPGRADNLLEEGDELDP
        EP  RS R     L PA+ +  K NRGRGGAS++ +   A A   E    LQ+E++ +R ++ TMEEMYNE+++A    S S+     D   E GD    
Subjt:  EPPRRSTRNANTVLPPAYSRHNKTNRGRGGASKKVSRKVASAAEPEVLATLQRELDDIRNRVRTMEEMYNEIIRANQMESHSKAPGRADNLLEEGDELDP

Query:  PINPDDYESVADNGGIDYSLRDHDIRKHLVDRKRMASRGPGISPSYSQIYSNSDLKA
                           LRDH      + RKR +S   G SPS S   SN   ++
Subjt:  PINPDDYESVADNGGIDYSLRDHDIRKHLVDRKRMASRGPGISPSYSQIYSNSDLKA

TrEMBL top hitse value%identityAlignment
A0A6J1DNM4 Ribonuclease H1.5e-1250.54Show/hide
Query:  MEEMYNEIIRANQMESHSKAPGRADNLLEEGDELDPPINPDDYESVADNGGIDYSLRDHDIRKHLVDRKRMASRGPGISPSYSQIYSNSDLKA
        ME+MY E  RAN+  S S APG        G++  P I P D E + ++GG+DYSLRD+D+RKHL ++K+ ASR P  S SYS+ +SNS+LKA
Subjt:  MEEMYNEIIRANQMESHSKAPGRADNLLEEGDELDPPINPDDYESVADNGGIDYSLRDHDIRKHLVDRKRMASRGPGISPSYSQIYSNSDLKA

A0A6J1DPC9 uncharacterized protein LOC1110222807.2e-0750.79Show/hide
Query:  GDELDPPINPDDYESVADNGGIDYSLRDHDIRKHLVDRKRMASRGPGISPSYSQIYSNSDLKA
        G++  P I P + E + ++ G+DYSLRD+D+RKHL D+K+ AS  P  S SYS+ +SNS+LKA
Subjt:  GDELDPPINPDDYESVADNGGIDYSLRDHDIRKHLVDRKRMASRGPGISPSYSQIYSNSDLKA

A0A6J1DR60 uncharacterized protein LOC1110234885.5e-1541.54Show/hide
Query:  VEPPRRSTRNANTVLPPAYSRHNKTNRGRGGASKKVSRKVASAAEPEVLATLQRELDDIRNRVRTMEEMYNEIIRANQMESHSKAPGRADNLLEEGDELD
        V+PPRRSTRNANT+LPPA+ R  K NRGRGG +                                                        D+L E+GD+LD
Subjt:  VEPPRRSTRNANTVLPPAYSRHNKTNRGRGGASKKVSRKVASAAEPEVLATLQRELDDIRNRVRTMEEMYNEIIRANQMESHSKAPGRADNLLEEGDELD

Query:  PPINPDDYESVADNGGIDYSLRDHDIRKHL
        PPI+PDDYE   +N GIDYSLRDHD+RKHL
Subjt:  PPINPDDYESVADNGGIDYSLRDHDIRKHL

A0A6J1DSR0 uncharacterized protein LOC1110239675.1e-0552Show/hide
Query:  MEEMYNEIIRANQMESHSKAPGRADNLLEEGDELDPPINPDDYESVADNG
        MEE YN+++  N++ S S  PG  D+LL++GD+ D P +PDDYE +ADNG
Subjt:  MEEMYNEIIRANQMESHSKAPGRADNLLEEGDELDPPINPDDYESVADNG

A0A6J1DZJ1 uncharacterized protein LOC1110257386.1e-0634.39Show/hide
Query:  EPPRRSTRNANTVLPPAYSRHNKTNRGRGGASKKVSRKVASAAEPEVLATLQRELDDIRNRVRTMEEMYNEIIRANQMESHSKAPGRADNLLEEGDELDP
        EP  RS R     L PA+ +  K NRGRGGAS++ +   A A   E    LQ+E++ +R ++ TMEEMYNE+++A    S S+     D   E GD    
Subjt:  EPPRRSTRNANTVLPPAYSRHNKTNRGRGGASKKVSRKVASAAEPEVLATLQRELDDIRNRVRTMEEMYNEIIRANQMESHSKAPGRADNLLEEGDELDP

Query:  PINPDDYESVADNGGIDYSLRDHDIRKHLVDRKRMASRGPGISPSYSQIYSNSDLKA
                           LRDH      + RKR +S   G SPS S   SN   ++
Subjt:  PINPDDYESVADNGGIDYSLRDHDIRKHLVDRKRMASRGPGISPSYSQIYSNSDLKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGGGATGAAATATCCTTTCGCCATGTGGAGGATCGGGATTCGCCACTGACAGAAGAATCAAAAGAACAAGCTTACGGAGAAAGTGTCCGAGTTCGATTT
GCTCGAACCCGACACGTCCGACCTCTAATCCGACCAAGGTCTTCCCTTAGTGTTTCAGGTCAGAGCAAGGACCGGGTGGAGCCACCTCGAAGGTCCACCCGCAAC
GCCAACACCGTCTTGCCCCCAGCATACTCGAGGCACAACAAGACCAACCGAGGTCGAGGTGGGGCCTCGAAAAAGGTTTCTCGAAAGGTCGCGTCAGCTGCAGAA
CCTGAGGTTCTCGCTACCCTCCAGCGGGAGTTAGATGATATACGCAACCGAGTGCGCACCATGGAGGAGATGTATAATGAGATAATAAGGGCAAATCAAATGGAG
TCCCATTCCAAGGCCCCAGGCAGGGCAGACAACTTGCTAGAAGAAGGAGATGAGCTAGATCCCCCCATCAACCCCGATGACTATGAGTCTGTGGCCGACAACGGA
GGGATCGACTATAGTTTGAGGGATCACGACATTCGGAAGCACCTTGTCGATAGGAAGAGAATGGCCTCAAGAGGCCCGGGGATTTCTCCATCCTACTCTCAAATA
TACTCCAACTCCGACCTCAAAGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGGGATGAAATATCCTTTCGCCATGTGGAGGATCGGGATTCGCCACTGACAGAAGAATCAAAAGAACAAGCTTACGGAGAAAGTGTCCGAGTTCGATTT
GCTCGAACCCGACACGTCCGACCTCTAATCCGACCAAGGTCTTCCCTTAGTGTTTCAGGTCAGAGCAAGGACCGGGTGGAGCCACCTCGAAGGTCCACCCGCAAC
GCCAACACCGTCTTGCCCCCAGCATACTCGAGGCACAACAAGACCAACCGAGGTCGAGGTGGGGCCTCGAAAAAGGTTTCTCGAAAGGTCGCGTCAGCTGCAGAA
CCTGAGGTTCTCGCTACCCTCCAGCGGGAGTTAGATGATATACGCAACCGAGTGCGCACCATGGAGGAGATGTATAATGAGATAATAAGGGCAAATCAAATGGAG
TCCCATTCCAAGGCCCCAGGCAGGGCAGACAACTTGCTAGAAGAAGGAGATGAGCTAGATCCCCCCATCAACCCCGATGACTATGAGTCTGTGGCCGACAACGGA
GGGATCGACTATAGTTTGAGGGATCACGACATTCGGAAGCACCTTGTCGATAGGAAGAGAATGGCCTCAAGAGGCCCGGGGATTTCTCCATCCTACTCTCAAATA
TACTCCAACTCCGACCTCAAAGCCTAG
Protein sequenceShow/hide protein sequence
MFGDEISFRHVEDRDSPLTEESKEQAYGESVRVRFARTRHVRPLIRPRSSLSVSGQSKDRVEPPRRSTRNANTVLPPAYSRHNKTNRGRGGASKKVSRKVASAAE
PEVLATLQRELDDIRNRVRTMEEMYNEIIRANQMESHSKAPGRADNLLEEGDELDPPINPDDYESVADNGGIDYSLRDHDIRKHLVDRKRMASRGPGISPSYSQI
YSNSDLKA