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Moc09g14450 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g14450
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr9:12449315..12451196
RNA-Seq ExpressionMoc09g14450
SyntenyMoc09g14450
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150760.1 uncharacterized protein LOC111018823 [Momordica charantia]3.6e-0963.27Show/hide
Query:  SKVSLVAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGV
        ++V+ +AEFV+IDG+S YNAIFGRPI+H+  A+ STLHQ++KY TP GV
Subjt:  SKVSLVAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGV
XP_022152110.1 uncharacterized protein LOC111019899 [Momordica charantia]2.7e-0956.36Show/hide
Query:  SLKKRSSKVSLVAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGV
        +L +  ++V+ +AEFV++DG+S YNAIFGRPI+H+  A+ STLHQ++KY TP GV
Subjt:  SLKKRSSKVSLVAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGV
XP_022155866.1 uncharacterized protein LOC111022880 [Momordica charantia]2.5e-1056.36Show/hide
Query:  SLKKRSSKVSLVAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGV
        +L +  ++++ +AEFV++DG+S YNAIFGRPI+H+  A+ STLHQ++KYPTP GV
Subjt:  SLKKRSSKVSLVAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGV
XP_022157474.1 uncharacterized protein LOC111024166 [Momordica charantia]1.0e-1156.45Show/hide
Query:  SSKVSLVAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGVELSEVTRRPHGS
        S++V+ +AEFV+IDG+S YNAIFGRPI+H+  A+ STLHQ++KY TP GV +   +++P GS
Subjt:  SSKVSLVAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGVELSEVTRRPHGS
XP_022158257.1 uncharacterized protein LOC111024791 [Momordica charantia]2.5e-1061.4Show/hide
Query:  VAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGVELSEVTRRPHGSA
        +AEFV+IDGKS YNAIFGRPI+H+  A+ STLHQ++KY TP GV     +R+  GSA
Subjt:  VAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGVELSEVTRRPHGSA
TrEMBL top hitse value%identityAlignment
A0A6J1DD03 uncharacterized protein LOC1110198991.3e-0956.36Show/hide
Query:  SLKKRSSKVSLVAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGV
        +L +  ++V+ +AEFV++DG+S YNAIFGRPI+H+  A+ STLHQ++KY TP GV
Subjt:  SLKKRSSKVSLVAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGV
A0A6J1DQ11 uncharacterized protein LOC1110220301.7e-0963.27Show/hide
Query:  SKVSLVAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGV
        ++V+ +AEFV+IDG+S YNAIFGRPI+H+  A+ STLHQ++KY TP GV
Subjt:  SKVSLVAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGV
A0A6J1DT04 uncharacterized protein LOC1110228801.2e-1056.36Show/hide
Query:  SLKKRSSKVSLVAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGV
        +L +  ++++ +AEFV++DG+S YNAIFGRPI+H+  A+ STLHQ++KYPTP GV
Subjt:  SLKKRSSKVSLVAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGV
A0A6J1DWK7 uncharacterized protein LOC1110241664.8e-1256.45Show/hide
Query:  SSKVSLVAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGVELSEVTRRPHGS
        S++V+ +AEFV+IDG+S YNAIFGRPI+H+  A+ STLHQ++KY TP GV +   +++P GS
Subjt:  SSKVSLVAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGVELSEVTRRPHGS
A0A6J1DWS1 uncharacterized protein LOC1110247911.2e-1061.4Show/hide
Query:  VAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGVELSEVTRRPHGSA
        +AEFV+IDGKS YNAIFGRPI+H+  A+ STLHQ++KY TP GV     +R+  GSA
Subjt:  VAEFVIIDGKSTYNAIFGRPILHTLEAMSSTLHQMMKYPTPKGVELSEVTRRPHGSA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACGGCCCGCTCTGTAAAGGTTACAGACGACTCGATCCAGTTCTGCAAAAATACAGAACAGAACATAGAAGTGGAACTCCCAGTGATCTCTCGATCAAGCTCTCT
CCCTCAACTCTCCCTAACATTCCAAACAAAATGCTCCCACAAGCACGATTCTCGAACCAAAGAGGATAGCAAGGAAGACATAGTGGTGGTGTTCGAGGGAAACTCGTTGA
AGAAACGTTCTTCAAAGGTCAGCTTGGTGGCCGAGTTCGTGATCATCGACGGCAAGTCGACTTACAACGCTATCTTTGGTCGACCGATTCTACATACCCTAGAGGCCATG
TCGTCGACATTACACCAGATGATGAAGTATCCTACTCCTAAGGGGGTGGAGTTGTCCGAGGTGACCAGAAGACCTCACGGGAGTGCTACGTTGCTGCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATACGGCCCGCTCTGTAAAGGTTACAGACGACTCGATCCAGTTCTGCAAAAATACAGAACAGAACATAGAAGTGGAACTCCCAGTGATCTCTCGATCAAGCTCTCT
CCCTCAACTCTCCCTAACATTCCAAACAAAATGCTCCCACAAGCACGATTCTCGAACCAAAGAGGATAGCAAGGAAGACATAGTGGTGGTGTTCGAGGGAAACTCGTTGA
AGAAACGTTCTTCAAAGGTCAGCTTGGTGGCCGAGTTCGTGATCATCGACGGCAAGTCGACTTACAACGCTATCTTTGGTCGACCGATTCTACATACCCTAGAGGCCATG
TCGTCGACATTACACCAGATGATGAAGTATCCTACTCCTAAGGGGGTGGAGTTGTCCGAGGTGACCAGAAGACCTCACGGGAGTGCTACGTTGCTGCCCTAA
Protein sequenceShow/hide protein sequence
MDTARSVKVTDDSIQFCKNTEQNIEVELPVISRSSSLPQLSLTFQTKCSHKHDSRTKEDSKEDIVVVFEGNSLKKRSSKVSLVAEFVIIDGKSTYNAIFGRPILHTLEAM
SSTLHQMMKYPTPKGVELSEVTRRPHGSATLLP