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Moc09g14650 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g14650
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptiongag_pre-integrs domain-containing protein
Genome locationchr9:12592924..12596432
RNA-Seq ExpressionMoc09g14650
SyntenyMoc09g14650
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7561662.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]2.5e-1641.74Show/hide
Query:  GKYEGVLKFSGENFSFWKIQVKDLFTCKKIHKALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWTK
        G   G+ KF G +F+FW++Q++D    KK+H+ L  KP  M  + W+ +D Q +  IR+ LS  V   VAKE   + L+K L D YEK SAN K+ L  K
Subjt:  GKYEGVLKFSGENFSFWKIQVKDLFTCKKIHKALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWTK

Query:  YFNIHMEEENSVNSH
         F++ MEE   V +H
Subjt:  YFNIHMEEENSVNSH

KAG7584790.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]2.5e-1641.74Show/hide
Query:  GKYEGVLKFSGENFSFWKIQVKDLFTCKKIHKALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWTK
        G   G+ KF G +F+FW++Q++D    KK+H+ L  KP  M  + W+ +D Q +  IR+ LS  V   VAKE   + L+K L D YEK SAN K+ L  K
Subjt:  GKYEGVLKFSGENFSFWKIQVKDLFTCKKIHKALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWTK

Query:  YFNIHMEEENSVNSH
         F++ MEE   V +H
Subjt:  YFNIHMEEENSVNSH

KAG7593230.1 Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa]2.5e-1641.74Show/hide
Query:  GKYEGVLKFSGENFSFWKIQVKDLFTCKKIHKALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWTK
        G   G+ KF G +F+FW++Q++D    KK+H+ L  KP  M  + W+ +D Q +  IR+ LS  V   VAKE   + L+K L D YEK SAN K+ L  K
Subjt:  GKYEGVLKFSGENFSFWKIQVKDLFTCKKIHKALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWTK

Query:  YFNIHMEEENSVNSH
         F++ MEE   V +H
Subjt:  YFNIHMEEENSVNSH

RVW15028.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]2.5e-1643.1Show/hide
Query:  GKYEGVLKFSGENFSFWKIQVKDLFTCKKIH-KALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWT
        GK  G+  F   NF++W++Q++D    +K+H   LG KP  M  + W  +D Q +  IR+ LS  V   V KE I  +L+KAL D YEKLSAN K+ L  
Subjt:  GKYEGVLKFSGENFSFWKIQVKDLFTCKKIH-KALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWT

Query:  KYFNIHMEEENSVNSH
        K FN+ M E  SV  H
Subjt:  KYFNIHMEEENSVNSH

XP_024021224.1 uncharacterized protein LOC112091537 [Morus notabilis]2.5e-1643.52Show/hide
Query:  GVLKFSGENFSFWKIQVKDLFTCKKIHKALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWTKYFNI
        G+ KF G +F++WK+Q++D    KK+H  LGEKP  M D+ W  +D Q +  IR+ L+  V   VAKE  A  L+  L D YEK +AN K+ L  K FN+
Subjt:  GVLKFSGENFSFWKIQVKDLFTCKKIHKALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWTKYFNI

Query:  HMEEENSV
         M ++ SV
Subjt:  HMEEENSV

TrEMBL top hitse value%identityAlignment
A0A0D3CS45 Uncharacterized protein1.2e-1642.61Show/hide
Query:  GKYEGVLKFSGENFSFWKIQVKDLFTCKKIHKALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWTK
        G    + KF G NF+FW++Q++D    KK+H+ L +KP  M    W  +D Q +  IR+ LS  V   VAKE I + L+K L D YEK SAN K+ L  K
Subjt:  GKYEGVLKFSGENFSFWKIQVKDLFTCKKIHKALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWTK

Query:  YFNIHMEEENSVNSH
         F++ MEE   V +H
Subjt:  YFNIHMEEENSVNSH

A0A0D3DKA6 gag_pre-integrs domain-containing protein3.5e-1640.87Show/hide
Query:  GKYEGVLKFSGENFSFWKIQVKDLFTCKKIHKALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWTK
        G    + KF G +F+FW++Q++D    KK+H+ L +KP  M    W  +D Q +  IR+ LS  V   VAKE   + L+K L D YEK+SAN K+ L  K
Subjt:  GKYEGVLKFSGENFSFWKIQVKDLFTCKKIHKALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWTK

Query:  YFNIHMEEENSVNSH
         F++ MEE   V +H
Subjt:  YFNIHMEEENSVNSH

A0A2N9FSS1 Uncharacterized protein2.1e-1642.06Show/hide
Query:  GKYEGVLKFSGENFSFWKIQVKDLFTCKKIH-KALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWT
        GK  G+ KF G +F +W++Q++D    KK+H   LGEKP DM D  W  +D Q +  IR+ LS  V   V KE    EL+ AL   YEK SAN K+ L  
Subjt:  GKYEGVLKFSGENFSFWKIQVKDLFTCKKIH-KALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWT

Query:  KYFNIHMEEENSVNSHDDGDQTGSSA
        K FN+ M E   V   D G+ + S +
Subjt:  KYFNIHMEEENSVNSHDDGDQTGSSA

A0A2N9IKI1 Uncharacterized protein4.6e-1643.97Show/hide
Query:  GKYEGVLKFSGENFSFWKIQVKDLFTCKKIH-KALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWT
        GK  G+ KF G +F +W++Q++D    KK+H   LGEKP DM D  W  +D Q +  IR+ LS  V   V KE    EL+ AL   YEK SAN K+ L  
Subjt:  GKYEGVLKFSGENFSFWKIQVKDLFTCKKIH-KALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWT

Query:  KYFNIHMEEENSVNSH
        K FN+ M E  +V  H
Subjt:  KYFNIHMEEENSVNSH

A0A438BVT2 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-1643.1Show/hide
Query:  GKYEGVLKFSGENFSFWKIQVKDLFTCKKIH-KALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWT
        GK  G+  F   NF++W++Q++D    +K+H   LG KP  M  + W  +D Q +  IR+ LS  V   V KE I  +L+KAL D YEKLSAN K+ L  
Subjt:  GKYEGVLKFSGENFSFWKIQVKDLFTCKKIH-KALGEKPADMTDKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWT

Query:  KYFNIHMEEENSVNSH
        K FN+ M E  SV  H
Subjt:  KYFNIHMEEENSVNSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAATCGTCCAACGTCCGAGATAACGTTCAATCTGGGATGGGATTTAGGGTTTTAGGACAAAGGAAACGTCCGAGATGGGGTGGAAATTTTCGTTGGGCCAGGAA
ACGTCCGAGATGGGGTTTAGGGTTTTACTTGGAGAGAGTTCCCTTCATTTTTAAACATGAGGGTACTATGTTTTCACTGACGAACTGTAGAAGGGGAAAATATGAAGGGG
TTTTGAAGTTCAGTGGAGAGAATTTCAGTTTTTGGAAGATACAAGTAAAGGATCTTTTTACGTGCAAGAAGATACACAAGGCTTTGGGGGAGAAACCAGCGGATATGACA
GACAAGGCTTGGAATGAAATGGATGAGCAGACCGTTACAAATATCAGAATGGCATTATCAATGGGGGTATGCAGTCTCGTGGCGAAAGAGATGATTGCAAAAGAGTTGTT
GAAGGCCTTGCAAGATAGGTATGAAAAACTTTCTGCCAATACAAAAATACTTCTATGGACCAAGTATTTCAACATCCACATGGAGGAGGAAAACTCGGTGAATTCTCACG
ATGATGGCGACCAAACAGGAAGCTCCGCAGGGAATGAAGCAAAAGTTGCTCATTTTGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGAATCGTCCAACGTCCGAGATAACGTTCAATCTGGGATGGGATTTAGGGTTTTAGGACAAAGGAAACGTCCGAGATGGGGTGGAAATTTTCGTTGGGCCAGGAA
ACGTCCGAGATGGGGTTTAGGGTTTTACTTGGAGAGAGTTCCCTTCATTTTTAAACATGAGGGTACTATGTTTTCACTGACGAACTGTAGAAGGGGAAAATATGAAGGGG
TTTTGAAGTTCAGTGGAGAGAATTTCAGTTTTTGGAAGATACAAGTAAAGGATCTTTTTACGTGCAAGAAGATACACAAGGCTTTGGGGGAGAAACCAGCGGATATGACA
GACAAGGCTTGGAATGAAATGGATGAGCAGACCGTTACAAATATCAGAATGGCATTATCAATGGGGGTATGCAGTCTCGTGGCGAAAGAGATGATTGCAAAAGAGTTGTT
GAAGGCCTTGCAAGATAGGTATGAAAAACTTTCTGCCAATACAAAAATACTTCTATGGACCAAGTATTTCAACATCCACATGGAGGAGGAAAACTCGGTGAATTCTCACG
ATGATGGCGACCAAACAGGAAGCTCCGCAGGGAATGAAGCAAAAGTTGCTCATTTTGACTAG
Protein sequenceShow/hide protein sequence
MDESSNVRDNVQSGMGFRVLGQRKRPRWGGNFRWARKRPRWGLGFYLERVPFIFKHEGTMFSLTNCRRGKYEGVLKFSGENFSFWKIQVKDLFTCKKIHKALGEKPADMT
DKAWNEMDEQTVTNIRMALSMGVCSLVAKEMIAKELLKALQDRYEKLSANTKILLWTKYFNIHMEEENSVNSHDDGDQTGSSAGNEAKVAHFD