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Moc09g14810 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g14810
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr9:12744620..12747689
RNA-Seq ExpressionMoc09g14810
SyntenyMoc09g14810
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154103.1 uncharacterized protein LOC111021439 [Momordica charantia]2.2e-4587.18Show/hide
Query:  KVKEEFQAREPRMAKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDG
        +VKEEFQARE RM KYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLA  YETDLGRTV +EIL  PSIEAQEAMDID+QGQ EENWKS LIKYLKDG
Subjt:  KVKEEFQAREPRMAKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDG

Query:  ILPTEKIEAQQLQRQVA
        ILPTEKIEAQQLQ++ A
Subjt:  ILPTEKIEAQQLQRQVA

XP_022155342.1 uncharacterized protein LOC111022476 [Momordica charantia]3.8e-2185.51Show/hide
Query:  ARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDGILPTEKIEAQQLQRQ
        ARLAAAYETDL RTV +EIL EPSIEA EAMDIDEQGQ E+NWKS LIKYL+DGILPTEKIEAQQLQR+
Subjt:  ARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDGILPTEKIEAQQLQRQ

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]5.2e-4789.74Show/hide
Query:  KVKEEFQAREPRMAKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDG
        +VKEEFQAREPRMAKYLSQVRNQLDQFSKYEI QIPRAQNV+ADALARLAA YETDLGRTV +EIL EPSIEAQEAMDID QGQ EEN KSPLIKYLKDG
Subjt:  KVKEEFQAREPRMAKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDG

Query:  ILPTEKIEAQQLQRQVA
        ILPTEKIEAQQLQR+ A
Subjt:  ILPTEKIEAQQLQRQVA

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]1.2e-1472.58Show/hide
Query:  TDLSSEARPSPGHRLNPTTLDRGELVMSLNKVTDLSSEAMSSPGHRLNSTTLDRGEPTEKVK
        TDLS +ARPSPG+RLNPTTLD+G  V  L K TDLS +A  SPGHRLNSTTLDRGEP E+V+
Subjt:  TDLSSEARPSPGHRLNPTTLDRGELVMSLNKVTDLSSEAMSSPGHRLNSTTLDRGEPTEKVK

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]5.8e-4688.03Show/hide
Query:  KVKEEFQAREPRMAKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDG
        +VKE+FQARE RMAKYLSQVRNQLDQFSKYEIRQIP AQNVNAD LARLA AYETDLGRTV +EIL  PSIEAQEAMDID QGQ EENWKSPLIKYLKDG
Subjt:  KVKEEFQAREPRMAKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDG

Query:  ILPTEKIEAQQLQRQVA
        ILPTEKIEAQQLQR+ A
Subjt:  ILPTEKIEAQQLQRQVA

XP_022159204.1 uncharacterized protein LOC111025623 [Momordica charantia]4.3e-4181.2Show/hide
Query:  KVKEEFQAREPRMAKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDG
        +VKEEFQAREPRMAKYLS+V++QL QFSK+EIRQIP  QNVNADALARLAAAY TDLGRT+ +EIL EPSI+AQE MDIDEQ QSEENW S LIKYLKDG
Subjt:  KVKEEFQAREPRMAKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDG

Query:  ILPTEKIEAQQLQRQVA
        ILP E IE QQLQRQ A
Subjt:  ILPTEKIEAQQLQRQVA

TrEMBL top hitse value%identityAlignment
A0A6J1DJC7 Ribonuclease H1.1e-4587.18Show/hide
Query:  KVKEEFQAREPRMAKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDG
        +VKEEFQARE RM KYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLA  YETDLGRTV +EIL  PSIEAQEAMDID+QGQ EENWKS LIKYLKDG
Subjt:  KVKEEFQAREPRMAKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDG

Query:  ILPTEKIEAQQLQRQVA
        ILPTEKIEAQQLQ++ A
Subjt:  ILPTEKIEAQQLQRQVA

A0A6J1DP30 uncharacterized protein LOC1110224761.8e-2185.51Show/hide
Query:  ARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDGILPTEKIEAQQLQRQ
        ARLAAAYETDL RTV +EIL EPSIEA EAMDIDEQGQ E+NWKS LIKYL+DGILPTEKIEAQQLQR+
Subjt:  ARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDGILPTEKIEAQQLQRQ

A0A6J1DVC6 Ribonuclease H5.6e-4789.74Show/hide
Query:  KVKEEFQAREPRMAKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDG
        +VKEEFQAREPRMAKYLSQVRNQLDQFSKYEI QIPRAQNV+ADALARLAA YETDLGRTV +EIL EPSIEAQEAMDID QGQ EEN KSPLIKYLKDG
Subjt:  KVKEEFQAREPRMAKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDG

Query:  ILPTEKIEAQQLQRQVA
        ILPTEKIEAQQLQR+ A
Subjt:  ILPTEKIEAQQLQRQVA

A0A6J1DVC6 Ribonuclease H5.7e-1572.58Show/hide
Query:  TDLSSEARPSPGHRLNPTTLDRGELVMSLNKVTDLSSEAMSSPGHRLNSTTLDRGEPTEKVK
        TDLS +ARPSPG+RLNPTTLD+G  V  L K TDLS +A  SPGHRLNSTTLDRGEP E+V+
Subjt:  TDLSSEARPSPGHRLNPTTLDRGELVMSLNKVTDLSSEAMSSPGHRLNSTTLDRGEPTEKVK

A0A6J1DVC6 Ribonuclease H2.8e-4688.03Show/hide
Query:  KVKEEFQAREPRMAKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDG
        +VKE+FQARE RMAKYLSQVRNQLDQFSKYEIRQIP AQNVNAD LARLA AYETDLGRTV +EIL  PSIEAQEAMDID QGQ EENWKSPLIKYLKDG
Subjt:  KVKEEFQAREPRMAKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDG

Query:  ILPTEKIEAQQLQRQVA
        ILPTEKIEAQQLQR+ A
Subjt:  ILPTEKIEAQQLQRQVA

A0A6J1E1Q5 uncharacterized protein LOC1110256232.1e-4181.2Show/hide
Query:  KVKEEFQAREPRMAKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDG
        +VKEEFQAREPRMAKYLS+V++QL QFSK+EIRQIP  QNVNADALARLAAAY TDLGRT+ +EIL EPSI+AQE MDIDEQ QSEENW S LIKYLKDG
Subjt:  KVKEEFQAREPRMAKYLSQVRNQLDQFSKYEIRQIPRAQNVNADALARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDG

Query:  ILPTEKIEAQQLQRQVA
        ILP E IE QQLQRQ A
Subjt:  ILPTEKIEAQQLQRQVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTACCCCCCATCGTTTCATTGGTTGATCTTGACCCCTGTTATTTTGAGATTATATCTAGTATTCAAAAAGCTTTTCAACTTCTTGCTTATGAACTATCA
TTCTCACACAAAATCGATTTATTTGCCTATATCAATGGTGTTATAGAGAACGACCTAGCGCCGAGGCAGAGAACGAAGAAAGTGACCGGCGGAGAACCAACCAAG
CCGAGAGGGCTCGGTCCTGACCCCTGCTCGGTACCGACCCCTGGTATCGGTTCCCTTATCATCGAGTTAGGTGTGTGCGAGAAAAAGAGTCGGAGGGTTAAAATC
CATGCATCAACAATTGGCACCGTCTGTGGGGACGATACAATAAAGACAGACCTCTCGAGTGAGGCAAGGCCGAGCCCTGGTCATCGACTTAATCCGACCACCCTT
GACAGGGGAGAACTAGTGATGAGCCTGAATAAAGTGACAGACCTCTCGAGTGAGGCAATGTCGAGCCCTGGTCATCGACTTAATTCGACCACCCTTGACAGGGGA
GAACCGACTGAGAAGGTGAAAGAGGAGTTCCAGGCTAGAGAACCGCGAATGGCGAAATACCTTTCACAGGTAAGAAACCAGCTCGACCAGTTCTCAAAATATGAG
ATTCGACAAATTCCACGTGCTCAAAACGTCAACGCTGATGCGTTGGCTCGACTAGCTGCAGCTTATGAAACCGACCTAGGCAGAACTGTACAGCTCGAGATTCTA
GCCGAGCCAAGCATAGAAGCTCAGGAAGCAATGGATATCGACGAGCAAGGGCAATCAGAAGAAAACTGGAAGAGCCCTTTGATCAAATATTTGAAAGACGGGATC
CTGCCTACTGAAAAGATAGAGGCCCAGCAGCTACAGCGACAAGTAGCCACATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTACCCCCCATCGTTTCATTGGTTGATCTTGACCCCTGTTATTTTGAGATTATATCTAGTATTCAAAAAGCTTTTCAACTTCTTGCTTATGAACTATCA
TTCTCACACAAAATCGATTTATTTGCCTATATCAATGGTGTTATAGAGAACGACCTAGCGCCGAGGCAGAGAACGAAGAAAGTGACCGGCGGAGAACCAACCAAG
CCGAGAGGGCTCGGTCCTGACCCCTGCTCGGTACCGACCCCTGGTATCGGTTCCCTTATCATCGAGTTAGGTGTGTGCGAGAAAAAGAGTCGGAGGGTTAAAATC
CATGCATCAACAATTGGCACCGTCTGTGGGGACGATACAATAAAGACAGACCTCTCGAGTGAGGCAAGGCCGAGCCCTGGTCATCGACTTAATCCGACCACCCTT
GACAGGGGAGAACTAGTGATGAGCCTGAATAAAGTGACAGACCTCTCGAGTGAGGCAATGTCGAGCCCTGGTCATCGACTTAATTCGACCACCCTTGACAGGGGA
GAACCGACTGAGAAGGTGAAAGAGGAGTTCCAGGCTAGAGAACCGCGAATGGCGAAATACCTTTCACAGGTAAGAAACCAGCTCGACCAGTTCTCAAAATATGAG
ATTCGACAAATTCCACGTGCTCAAAACGTCAACGCTGATGCGTTGGCTCGACTAGCTGCAGCTTATGAAACCGACCTAGGCAGAACTGTACAGCTCGAGATTCTA
GCCGAGCCAAGCATAGAAGCTCAGGAAGCAATGGATATCGACGAGCAAGGGCAATCAGAAGAAAACTGGAAGAGCCCTTTGATCAAATATTTGAAAGACGGGATC
CTGCCTACTGAAAAGATAGAGGCCCAGCAGCTACAGCGACAAGTAGCCACATAA
Protein sequenceShow/hide protein sequence
MKLPPIVSLVDLDPCYFEIISSIQKAFQLLAYELSFSHKIDLFAYINGVIENDLAPRQRTKKVTGGEPTKPRGLGPDPCSVPTPGIGSLIIELGVCEKKSRRVKI
HASTIGTVCGDDTIKTDLSSEARPSPGHRLNPTTLDRGELVMSLNKVTDLSSEAMSSPGHRLNSTTLDRGEPTEKVKEEFQAREPRMAKYLSQVRNQLDQFSKYE
IRQIPRAQNVNADALARLAAAYETDLGRTVQLEILAEPSIEAQEAMDIDEQGQSEENWKSPLIKYLKDGILPTEKIEAQQLQRQVAT