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Moc09g14830 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g14830
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr9:12766315..12772201
RNA-Seq ExpressionMoc09g14830
SyntenyMoc09g14830
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046503.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.7e-3153.85Show/hide
Query:  EFIAVQNWLDATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVS
        +F   +  + A LVQ KV+K LD+    P  +T  E  + +E+ +STI+LYL+D VLR V EA T  ELW KL+SLY TKSL NK+YI+EKFFG+K+D S
Subjt:  EFIAVQNWLDATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVS

Query:  KDLEQNLDEFNQIVLDLSNIDEVMSDENKDIILLNSLPNSYN------KDNQESVT
        K LE+NL+EF +IV+DL+NI E MSDEN+ IILLNSLP +Y       K  Q+S+T
Subjt:  KDLEQNLDEFNQIVLDLSNIDEVMSDENKDIILLNSLPNSYN------KDNQESVT

KAA0050070.1 putative polyprotein [Cucumis melo var. makuwa]2.2e-3155.24Show/hide
Query:  EFIAVQNWLDATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVS
        +F   +  + A LVQ KV+K LD+    P+ +T  E  + +E+ +STI+LYL+D VLR V EA T  ELW KL+SLY  KSL+NK+YI+EKFFG+KMD S
Subjt:  EFIAVQNWLDATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVS

Query:  KDLEQNLDEFNQIVLDLSNIDEVMSDENKDIILLNSLPNSYNK
        K LE+NLDEF +I++DL+NI E MSDEN+ +ILLNSLP  Y +
Subjt:  KDLEQNLDEFNQIVLDLSNIDEVMSDENKDIILLNSLPNSYNK

KAA0050719.1 putative gag-pol polyprotein [Cucumis melo var. makuwa]3.3e-3260.15Show/hide
Query:  ATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVSKDLEQNLDEF
        A LVQ KV+K LD+    P  +T  E  + +E+ +STI+LYL+D VLR V EA T  ELW KL+SLY TKSL NK+YI+EKFFG+KMD SK LE+NLDEF
Subjt:  ATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVSKDLEQNLDEF

Query:  NQIVLDLSNIDEVMSDENKDIILLNSLPNSYNK
         +IV+DL+NI E MSDEN+ +ILLNSLP +Y +
Subjt:  NQIVLDLSNIDEVMSDENKDIILLNSLPNSYNK

TYK11792.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]7.4e-3257.45Show/hide
Query:  EFIAVQNWLDATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVS
        +F   +  + A LVQ KV+K LD+    P  +T  E  + +E+ +STI+LYL+D VLR V EA T  ELW KL+SLY TKSL NK+YI+EKFFG+KMD S
Subjt:  EFIAVQNWLDATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVS

Query:  KDLEQNLDEFNQIVLDLSNIDEVMSDENKDIILLNSLPNSY
        K LE+NLDEF +IV+DL+NI E MSDEN+  ILLNSLP +Y
Subjt:  KDLEQNLDEFNQIVLDLSNIDEVMSDENKDIILLNSLPNSY

TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa]2.6e-3256.64Show/hide
Query:  EFIAVQNWLDATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVS
        +F   +  + A LVQ KV+K LD+    P  +T  E  + +E+ +STI+LYL+D VLR V EA T  ELW KL+SLY TKSL NK+YI+EKFFG+KMD S
Subjt:  EFIAVQNWLDATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVS

Query:  KDLEQNLDEFNQIVLDLSNIDEVMSDENKDIILLNSLPNSYNK
        K LE+NLDEF +IV+DL+NI E MSDEN+ +ILLNSLP +Y +
Subjt:  KDLEQNLDEFNQIVLDLSNIDEVMSDENKDIILLNSLPNSYNK

TrEMBL top hitse value%identityAlignment
A0A5A7U459 Putative polyprotein1.0e-3155.24Show/hide
Query:  EFIAVQNWLDATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVS
        +F   +  + A LVQ KV+K LD+    P+ +T  E  + +E+ +STI+LYL+D VLR V EA T  ELW KL+SLY  KSL+NK+YI+EKFFG+KMD S
Subjt:  EFIAVQNWLDATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVS

Query:  KDLEQNLDEFNQIVLDLSNIDEVMSDENKDIILLNSLPNSYNK
        K LE+NLDEF +I++DL+NI E MSDEN+ +ILLNSLP  Y +
Subjt:  KDLEQNLDEFNQIVLDLSNIDEVMSDENKDIILLNSLPNSYNK

A0A5A7UB25 Putative gag-pol polyprotein1.6e-3260.15Show/hide
Query:  ATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVSKDLEQNLDEF
        A LVQ KV+K LD+    P  +T  E  + +E+ +STI+LYL+D VLR V EA T  ELW KL+SLY TKSL NK+YI+EKFFG+KMD SK LE+NLDEF
Subjt:  ATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVSKDLEQNLDEF

Query:  NQIVLDLSNIDEVMSDENKDIILLNSLPNSYNK
         +IV+DL+NI E MSDEN+ +ILLNSLP +Y +
Subjt:  NQIVLDLSNIDEVMSDENKDIILLNSLPNSYNK

A0A5D3BRV3 Retrovirus-related Pol polyprotein from transposon TNT 1-948.0e-3253.85Show/hide
Query:  EFIAVQNWLDATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVS
        +F   +  + A LVQ KV+K LD+    P  +T  E  + +E+ +STI+LYL+D VLR V EA T  ELW KL+SLY TKSL NK+YI+EKFFG+K+D S
Subjt:  EFIAVQNWLDATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVS

Query:  KDLEQNLDEFNQIVLDLSNIDEVMSDENKDIILLNSLPNSYN------KDNQESVT
        K LE+NL+EF +IV+DL+NI E MSDEN+ IILLNSLP +Y       K  Q+S+T
Subjt:  KDLEQNLDEFNQIVLDLSNIDEVMSDENKDIILLNSLPNSYN------KDNQESVT

A0A5D3CQJ5 Retrovirus-related Pol polyprotein from transposon TNT 1-943.6e-3257.45Show/hide
Query:  EFIAVQNWLDATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVS
        +F   +  + A LVQ KV+K LD+    P  +T  E  + +E+ +STI+LYL+D VLR V EA T  ELW KL+SLY TKSL NK+YI+EKFFG+KMD S
Subjt:  EFIAVQNWLDATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVS

Query:  KDLEQNLDEFNQIVLDLSNIDEVMSDENKDIILLNSLPNSY
        K LE+NLDEF +IV+DL+NI E MSDEN+  ILLNSLP +Y
Subjt:  KDLEQNLDEFNQIVLDLSNIDEVMSDENKDIILLNSLPNSY

A0A5D3DNU1 Putative gag-pol polyprotein1.2e-3256.64Show/hide
Query:  EFIAVQNWLDATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVS
        +F   +  + A LVQ KV+K LD+    P  +T  E  + +E+ +STI+LYL+D VLR V EA T  ELW KL+SLY TKSL NK+YI+EKFFG+KMD S
Subjt:  EFIAVQNWLDATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVS

Query:  KDLEQNLDEFNQIVLDLSNIDEVMSDENKDIILLNSLPNSYNK
        K LE+NLDEF +IV+DL+NI E MSDEN+ +ILLNSLP +Y +
Subjt:  KDLEQNLDEFNQIVLDLSNIDEVMSDENKDIILLNSLPNSYNK

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-944.1e-1735.38Show/hide
Query:  LVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVSKDLEQNLDEFNQ
        L+QQ + K LD +   P  + + +  + +E   S I L+L+D+V+  + +  TA+ +WT+L+SLY +K+LTNKLY++++ +   M    +   +L+ FN 
Subjt:  LVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFFGFKMDVSKDLEQNLDEFNQ

Query:  IVLDLSNIDEVMSDENKDIILLNSLPNSYN
        ++  L+N+   + +E+K I+LLNSLP+SY+
Subjt:  IVLDLSNIDEVMSDENKDIILLNSLPNSYN

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAGAGAAGGAAGCAAGGCTTGATGCATTTGGTGGAGAAGCTGCTGGAATTTATAGCTGTGCAGAATTGGTTAGATGCAACATTAGTTCAGCAAAAGGTTTCTAA
AACTTTAGATGATAATCCTACTTGTCCTAAAGCTTTAACATCCCTGGAAATTGAAGAATTTAATGAAATCTGTTTTAGTACTATAATATTGTATTTGGCTGACAATGTTT
TGCGTGAAGTACATGAAGCCAAGACTGCTAAAGAACTTTGGACCAAATTAGACTCACTTTACCCCACAAAATCATTAACCAATAAGCTTTATATTGAGGAAAAGTTTTTT
GGTTTCAAGATGGATGTTAGCAAAGACCTTGAACAAAATTTAGACGAGTTCAACCAGATTGTTCTTGACCTTAGCAATATAGATGAAGTAATGTCTGATGAAAACAAGGA
CATAATATTGCTTAATTCTCTTCCTAACTCCTACAATAAGGATAATCAAGAAAGTGTCACTAGACAAACTTTTGAAATGGAGTTGGAACTTCCAACTGGCAAGACAAATG
TTGTTGATCAAGTGCAGAATCTTAATGAACCAGATAATCCTGATGAACCAGACAATGATACTGAACCAGCTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGATCAAGAGAAGGAAGCAAGGCTTGATGCATTTGGTGGAGAAGCTGCTGGAATTTATAGCTGTGCAGAATTGGTTAGATGCAACATTAGTTCAGCAAAAGGTTTCTAA
AACTTTAGATGATAATCCTACTTGTCCTAAAGCTTTAACATCCCTGGAAATTGAAGAATTTAATGAAATCTGTTTTAGTACTATAATATTGTATTTGGCTGACAATGTTT
TGCGTGAAGTACATGAAGCCAAGACTGCTAAAGAACTTTGGACCAAATTAGACTCACTTTACCCCACAAAATCATTAACCAATAAGCTTTATATTGAGGAAAAGTTTTTT
GGTTTCAAGATGGATGTTAGCAAAGACCTTGAACAAAATTTAGACGAGTTCAACCAGATTGTTCTTGACCTTAGCAATATAGATGAAGTAATGTCTGATGAAAACAAGGA
CATAATATTGCTTAATTCTCTTCCTAACTCCTACAATAAGGATAATCAAGAAAGTGTCACTAGACAAACTTTTGAAATGGAGTTGGAACTTCCAACTGGCAAGACAAATG
TTGTTGATCAAGTGCAGAATCTTAATGAACCAGATAATCCTGATGAACCAGACAATGATACTGAACCAGCTGCATAA
Protein sequenceShow/hide protein sequence
MIKRRKQGLMHLVEKLLEFIAVQNWLDATLVQQKVSKTLDDNPTCPKALTSLEIEEFNEICFSTIILYLADNVLREVHEAKTAKELWTKLDSLYPTKSLTNKLYIEEKFF
GFKMDVSKDLEQNLDEFNQIVLDLSNIDEVMSDENKDIILLNSLPNSYNKDNQESVTRQTFEMELELPTGKTNVVDQVQNLNEPDNPDEPDNDTEPAA