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Moc09g14860 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g14860
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr9:12795845..12796282
RNA-Seq ExpressionMoc09g14860
SyntenyMoc09g14860
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150385.1 uncharacterized protein LOC111018561 [Momordica charantia]3.6e-1772.22Show/hide
Query:  RDHDLRKHLVDKKRNASRDLGISPSYSHKYFNSDLKAQSKYKPLTPKAVITREEFDLMKHRFDEQVEALKAK
        RD D R  + D+K+ ASR+   SPSYS ++ NSDLKAQSKYKPLTP+AVITREEFDLMKHRFDEQVEALK +
Subjt:  RDHDLRKHLVDKKRNASRDLGISPSYSHKYFNSDLKAQSKYKPLTPKAVITREEFDLMKHRFDEQVEALKAK

XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]1.2e-1546.43Show/hide
Query:  MRNRVRTMEETYNEMMRANQTGSHSKSPNGGTCRMMGMIRIHPSTRTTMSSLPTMGVD--YSLRDHDLRKHLVDKKRNASRDLGISPSYSHKYFNSDLKA
        MR ++ TME+ Y+EM++A   G+ S+S N      M   R H          P  G D  Y+ +  DLR+HL ++KR++S   G SPS SH+  NS+ +A
Subjt:  MRNRVRTMEETYNEMMRANQTGSHSKSPNGGTCRMMGMIRIHPSTRTTMSSLPTMGVD--YSLRDHDLRKHLVDKKRNASRDLGISPSYSHKYFNSDLKA

Query:  QSKYKPLTPKAVITREEFDLMKHRFDEQVEALKAKCEKKD
        +S Y P+TP+ VITREEFD +K +FD QVEALKAKCEKK+
Subjt:  QSKYKPLTPKAVITREEFDLMKHRFDEQVEALKAKCEKKD

XP_022154406.1 uncharacterized protein LOC111021683 [Momordica charantia]5.9e-2858.02Show/hide
Query:  MEETYNEMMRANQTGSHSKSPNGGTCRMMGMIRIHPSTRTTMSSLPTMGVDYSLRDHDLRKHLVDKKRNASRDLGISPSYSHKYFNSDLKAQSKYKPLTP
        ME+ Y E  RAN+T S S +P  G     G   I P  R  + +    G+DYSLRD+D+RKHL +KK+ ASR+   S SYS K+ NS+LKAQSKYKPL P
Subjt:  MEETYNEMMRANQTGSHSKSPNGGTCRMMGMIRIHPSTRTTMSSLPTMGVDYSLRDHDLRKHLVDKKRNASRDLGISPSYSHKYFNSDLKAQSKYKPLTP

Query:  KAVITREEFDLMKHRFDEQVEALKAKCEKKD
        +A+ITREEFDLMKH+F EQVEALKA+CEKK+
Subjt:  KAVITREEFDLMKHRFDEQVEALKAKCEKKD

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]2.8e-2575.9Show/hide
Query:  GVDYSLRDHDLRKHLVDKKRNASRDLGISPSYSHKYFNSDLKAQSKYKPLTPKAVITREEFDLMKHRFDEQVEALKAKCEKKD
        GVDYSLRD+DLRKHL DKK+ AS +   S SYS ++ NS+LKAQSKYKPL P+AVI REEFDLMKHRFDEQVEALKA+CEKK+
Subjt:  GVDYSLRDHDLRKHLVDKKRNASRDLGISPSYSHKYFNSDLKAQSKYKPLTPKAVITREEFDLMKHRFDEQVEALKAKCEKKD

XP_022157897.1 uncharacterized protein LOC111024503 [Momordica charantia]1.5e-1882.26Show/hide
Query:  ASRDLGISPSYSHKYFNSDLKAQSKYKPLTPKAVITREEFDLMKHRFDEQVEALKAKCEKKD
        ASR+   SPSYS ++ NSD KAQSKYKPLTP+AVITREEFDLMKHRFDEQVEALKAKCEKK+
Subjt:  ASRDLGISPSYSHKYFNSDLKAQSKYKPLTPKAVITREEFDLMKHRFDEQVEALKAKCEKKD

TrEMBL top hitse value%identityAlignment
A0A6J1D8C0 uncharacterized protein LOC1110185611.7e-1772.22Show/hide
Query:  RDHDLRKHLVDKKRNASRDLGISPSYSHKYFNSDLKAQSKYKPLTPKAVITREEFDLMKHRFDEQVEALKAK
        RD D R  + D+K+ ASR+   SPSYS ++ NSDLKAQSKYKPLTP+AVITREEFDLMKHRFDEQVEALK +
Subjt:  RDHDLRKHLVDKKRNASRDLGISPSYSHKYFNSDLKAQSKYKPLTPKAVITREEFDLMKHRFDEQVEALKAK

A0A6J1DDW5 uncharacterized protein LOC1110196345.6e-1646.43Show/hide
Query:  MRNRVRTMEETYNEMMRANQTGSHSKSPNGGTCRMMGMIRIHPSTRTTMSSLPTMGVD--YSLRDHDLRKHLVDKKRNASRDLGISPSYSHKYFNSDLKA
        MR ++ TME+ Y+EM++A   G+ S+S N      M   R H          P  G D  Y+ +  DLR+HL ++KR++S   G SPS SH+  NS+ +A
Subjt:  MRNRVRTMEETYNEMMRANQTGSHSKSPNGGTCRMMGMIRIHPSTRTTMSSLPTMGVD--YSLRDHDLRKHLVDKKRNASRDLGISPSYSHKYFNSDLKA

Query:  QSKYKPLTPKAVITREEFDLMKHRFDEQVEALKAKCEKKD
        +S Y P+TP+ VITREEFD +K +FD QVEALKAKCEKK+
Subjt:  QSKYKPLTPKAVITREEFDLMKHRFDEQVEALKAKCEKKD

A0A6J1DNM4 Ribonuclease H2.9e-2858.02Show/hide
Query:  MEETYNEMMRANQTGSHSKSPNGGTCRMMGMIRIHPSTRTTMSSLPTMGVDYSLRDHDLRKHLVDKKRNASRDLGISPSYSHKYFNSDLKAQSKYKPLTP
        ME+ Y E  RAN+T S S +P  G     G   I P  R  + +    G+DYSLRD+D+RKHL +KK+ ASR+   S SYS K+ NS+LKAQSKYKPL P
Subjt:  MEETYNEMMRANQTGSHSKSPNGGTCRMMGMIRIHPSTRTTMSSLPTMGVDYSLRDHDLRKHLVDKKRNASRDLGISPSYSHKYFNSDLKAQSKYKPLTP

Query:  KAVITREEFDLMKHRFDEQVEALKAKCEKKD
        +A+ITREEFDLMKH+F EQVEALKA+CEKK+
Subjt:  KAVITREEFDLMKHRFDEQVEALKAKCEKKD

A0A6J1DPC9 uncharacterized protein LOC1110222801.3e-2575.9Show/hide
Query:  GVDYSLRDHDLRKHLVDKKRNASRDLGISPSYSHKYFNSDLKAQSKYKPLTPKAVITREEFDLMKHRFDEQVEALKAKCEKKD
        GVDYSLRD+DLRKHL DKK+ AS +   S SYS ++ NS+LKAQSKYKPL P+AVI REEFDLMKHRFDEQVEALKA+CEKK+
Subjt:  GVDYSLRDHDLRKHLVDKKRNASRDLGISPSYSHKYFNSDLKAQSKYKPLTPKAVITREEFDLMKHRFDEQVEALKAKCEKKD

A0A6J1DVR0 uncharacterized protein LOC1110245037.1e-1982.26Show/hide
Query:  ASRDLGISPSYSHKYFNSDLKAQSKYKPLTPKAVITREEFDLMKHRFDEQVEALKAKCEKKD
        ASR+   SPSYS ++ NSD KAQSKYKPLTP+AVITREEFDLMKHRFDEQVEALKAKCEKK+
Subjt:  ASRDLGISPSYSHKYFNSDLKAQSKYKPLTPKAVITREEFDLMKHRFDEQVEALKAKCEKKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCAACCGAGTACGCACCATGGAGGAAACTTATAATGAAATGATGCGGGCGAACCAAACTGGGTCTCATTCCAAGTCCCCAAACGGAGGGACCTGTCGGATGATGGG
GATGATCAGGATCCACCCCTCCACTCGGACGACTATGAGCTCATTGCCGACAATGGGAGTTGACTATAGCTTGCGGGACCACGATCTTAGAAAACACCTCGTCGATAAAA
AGAGGAATGCCTCGCGGGACCTAGGGATCTCTCCATCCTACTCTCACAAATATTTTAACTCCGACCTCAAGGCCCAGTCGAAGTACAAACCGTTGACACCGAAGGCTGTG
ATTACGAGGGAAGAGTTCGACCTGATGAAGCACAGGTTTGACGAACAAGTTGAAGCACTAAAGGCGAAGTGCGAAAAGAAAGACATCCATTTGACGATGGCGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCAACCGAGTACGCACCATGGAGGAAACTTATAATGAAATGATGCGGGCGAACCAAACTGGGTCTCATTCCAAGTCCCCAAACGGAGGGACCTGTCGGATGATGGG
GATGATCAGGATCCACCCCTCCACTCGGACGACTATGAGCTCATTGCCGACAATGGGAGTTGACTATAGCTTGCGGGACCACGATCTTAGAAAACACCTCGTCGATAAAA
AGAGGAATGCCTCGCGGGACCTAGGGATCTCTCCATCCTACTCTCACAAATATTTTAACTCCGACCTCAAGGCCCAGTCGAAGTACAAACCGTTGACACCGAAGGCTGTG
ATTACGAGGGAAGAGTTCGACCTGATGAAGCACAGGTTTGACGAACAAGTTGAAGCACTAAAGGCGAAGTGCGAAAAGAAAGACATCCATTTGACGATGGCGAGATGA
Protein sequenceShow/hide protein sequence
MRNRVRTMEETYNEMMRANQTGSHSKSPNGGTCRMMGMIRIHPSTRTTMSSLPTMGVDYSLRDHDLRKHLVDKKRNASRDLGISPSYSHKYFNSDLKAQSKYKPLTPKAV
ITREEFDLMKHRFDEQVEALKAKCEKKDIHLTMAR