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Moc09g15090 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g15090
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCob intron3 ORF
Genome locationchr9:12935389..12936086
RNA-Seq ExpressionMoc09g15090
SyntenyMoc09g15090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD25595.1 TPA_asm: hypothetical protein HUJ06_027059 [Nelumbo nucifera]6.5e-1749.48Show/hide
Query:  MQDFMSKSARIRYVRYADDIAFAMLEGANSEMVSQGFKQFFNEALTELKLEATSLELVRGISKPCSTLVLGVLISIRPDRNLELRAPGSKKNVSINR
        ++  + +  ++RYVRYADD+ F +L+G +SE VSQ F++ F EAL  +KLEATS EL+RG + PC+TLVLGVL+SI+ +  LE+RAP  +    +N+
Subjt:  MQDFMSKSARIRYVRYADDIAFAMLEGANSEMVSQGFKQFFNEALTELKLEATSLELVRGISKPCSTLVLGVLISIRPDRNLELRAPGSKKNVSINR

KAB8468469.1 hypothetical protein FH972_025303 [Carpinus fangiana]7.9e-0743.37Show/hide
Query:  MSKSARIRYVRYADDIAFAMLEGANSEMVSQGFKQFFNEALTELKLEATSLELVRGISKPCSTLVLGVLISIRPDRNLELRAP
        M     +RY RYADD+ F  L+GA+SE   + F+  F E L  LKLE + +EL+R    P  T VLG++  + P   LE RAP
Subjt:  MSKSARIRYVRYADDIAFAMLEGANSEMVSQGFKQFFNEALTELKLEATSLELVRGISKPCSTLVLGVLISIRPDRNLELRAP

KUM47405.1 cob intron3 ORF [Picea glauca]6.3e-1249.43Show/hide
Query:  MQDFMSKSARIRYVRYADDIAFAMLEGANSEMVSQGFKQFFNEALTELKLEATSLELVRGISKPCSTLVLGVLISIRPDRNLELRAP
        + +FM     + YVRYADD+ FA+ +G +SE V   +K+FF +AL +LKL  TS+EL+RGI  P  T VLG+++SI P   LE RAP
Subjt:  MQDFMSKSARIRYVRYADDIAFAMLEGANSEMVSQGFKQFFNEALTELKLEATSLELVRGISKPCSTLVLGVLISIRPDRNLELRAP

QWQ49911.1 hypothetical protein [Zelkova schneideriana]1.3e-3382.35Show/hide
Query:  MQDFMSKSARIRYVRYADDIAFAMLEGANSEMVSQGFKQFFNEALTELKLEATSLELVRGISKPCSTLVLGVLISIRPDRNLELRAPGSKKNVSINRQRH
        MQDFMSK ARI+YVRYADDIAF + EGANSEMVSQGFKQFFNEALTELKLEATSLELVRGISKPCSTLVLGVLISIRPDR LELRA       +INR + 
Subjt:  MQDFMSKSARIRYVRYADDIAFAMLEGANSEMVSQGFKQFFNEALTELKLEATSLELVRGISKPCSTLVLGVLISIRPDRNLELRAPGSKKNVSINRQRH

Query:  KE
        K+
Subjt:  KE

YP_009381647.1 hypothetical protein AEK19_MT1231 [Utricularia reniformis]6.1e-0786.11Show/hide
Query:  MQDFMSKSARIRYVRYADDIAFAMLEGANSEMVSQG
        MQDF+S+ AR+RYVRYADDIAFAMLEGANSEMVS G
Subjt:  MQDFMSKSARIRYVRYADDIAFAMLEGANSEMVSQG

TrEMBL top hitse value%identityAlignment
A0A117NGV6 Cob intron3 ORF3.0e-1249.43Show/hide
Query:  MQDFMSKSARIRYVRYADDIAFAMLEGANSEMVSQGFKQFFNEALTELKLEATSLELVRGISKPCSTLVLGVLISIRPDRNLELRAP
        + +FM     + YVRYADD+ FA+ +G +SE V   +K+FF +AL +LKL  TS+EL+RGI  P  T VLG+++SI P   LE RAP
Subjt:  MQDFMSKSARIRYVRYADDIAFAMLEGANSEMVSQGFKQFFNEALTELKLEATSLELVRGISKPCSTLVLGVLISIRPDRNLELRAP

A0A1Y0B229 Uncharacterized protein2.9e-0786.11Show/hide
Query:  MQDFMSKSARIRYVRYADDIAFAMLEGANSEMVSQG
        MQDF+S+ AR+RYVRYADDIAFAMLEGANSEMVS G
Subjt:  MQDFMSKSARIRYVRYADDIAFAMLEGANSEMVSQG

A0A2T8I3J9 Uncharacterized protein3.8e-0750.75Show/hide
Query:  VRYADDIAFAMLEGANSEMVSQGFKQFFNEALTELKLEATSLELVRGISKPC-STLVLGVLISIRPD
        V Y D+  FA+ +G  SE VSQ F+Q   E+L ELKL   SLEL+R +SKPC + ++ GVL+SI  D
Subjt:  VRYADDIAFAMLEGANSEMVSQGFKQFFNEALTELKLEATSLELVRGISKPC-STLVLGVLISIRPD

A0A5N6L0M6 Reverse transcriptase domain-containing protein3.8e-0743.37Show/hide
Query:  MSKSARIRYVRYADDIAFAMLEGANSEMVSQGFKQFFNEALTELKLEATSLELVRGISKPCSTLVLGVLISIRPDRNLELRAP
        M     +RY RYADD+ F  L+GA+SE   + F+  F E L  LKLE + +EL+R    P  T VLG++  + P   LE RAP
Subjt:  MSKSARIRYVRYADDIAFAMLEGANSEMVSQGFKQFFNEALTELKLEATSLELVRGISKPCSTLVLGVLISIRPDRNLELRAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGACTTTATGAGTAAATCAGCGAGAATTAGGTATGTGCGCTACGCTGACGATATAGCTTTTGCTATGTTGGAAGGAGCCAACTCAGAAATGGTAAGCCAAGGGTT
CAAGCAATTCTTTAATGAGGCTTTGACGGAGCTCAAACTGGAAGCAACTAGTTTGGAGCTCGTTCGAGGAATAAGCAAGCCATGCTCTACCTTAGTTCTCGGAGTCCTAA
TATCAATTCGTCCGGACAGAAACTTGGAGTTAAGGGCACCCGGTTCAAAAAAAAATGTTTCAATCAATCGACAACGACATAAGGAAGATACAAGGCAAAGGCGTAAAACA
AAATGTGAGCGCTCCTTCCCCTCGTATTCCAGTATCTCGCTTTCTTTTCGTGTTGTTGCAATGCTAAAGAGGAATGCTGCTGTTAAAAACGGAGGCGGAATTACAGTGAA
GAAAAAGTCTCATGCAGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGACTTTATGAGTAAATCAGCGAGAATTAGGTATGTGCGCTACGCTGACGATATAGCTTTTGCTATGTTGGAAGGAGCCAACTCAGAAATGGTAAGCCAAGGGTT
CAAGCAATTCTTTAATGAGGCTTTGACGGAGCTCAAACTGGAAGCAACTAGTTTGGAGCTCGTTCGAGGAATAAGCAAGCCATGCTCTACCTTAGTTCTCGGAGTCCTAA
TATCAATTCGTCCGGACAGAAACTTGGAGTTAAGGGCACCCGGTTCAAAAAAAAATGTTTCAATCAATCGACAACGACATAAGGAAGATACAAGGCAAAGGCGTAAAACA
AAATGTGAGCGCTCCTTCCCCTCGTATTCCAGTATCTCGCTTTCTTTTCGTGTTGTTGCAATGCTAAAGAGGAATGCTGCTGTTAAAAACGGAGGCGGAATTACAGTGAA
GAAAAAGTCTCATGCAGGATAG
Protein sequenceShow/hide protein sequence
MQDFMSKSARIRYVRYADDIAFAMLEGANSEMVSQGFKQFFNEALTELKLEATSLELVRGISKPCSTLVLGVLISIRPDRNLELRAPGSKKNVSINRQRHKEDTRQRRKT
KCERSFPSYSSISLSFRVVAMLKRNAAVKNGGGITVKKKSHAG