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Moc09g15280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g15280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionProtein TIC 214
Genome locationchr9:12977338..12979847
RNA-Seq ExpressionMoc09g15280
SyntenyMoc09g15280
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7012819.1 unnamed protein product [Microthlaspi erraticum]9.5e-5290.35Show/hide
Query:  MEGQRPLVSPPVKNWGLTIASQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL
        MEG+R LVS PVKNW LTI SQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDTVGEGTPGN SSGDGVG VAQRIRARGYEPRCRGFESLL
Subjt:  MEGQRPLVSPPVKNWGLTIASQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL

Query:  AHNRPKREGLFPLG
        AHNRPKREG FP G
Subjt:  AHNRPKREGLFPLG

CAA7014164.1 unnamed protein product [Microthlaspi erraticum]8.6e-5391.23Show/hide
Query:  MEGQRPLVSPPVKNWGLTIASQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL
        MEG+RPLVS PVKNW LTI SQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDTVGEGTPGN SSGDGVG VAQRIRARGYEPRCRGFESLL
Subjt:  MEGQRPLVSPPVKNWGLTIASQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL

Query:  AHNRPKREGLFPLG
        AHNRPKREG FP G
Subjt:  AHNRPKREGLFPLG

MBA0613618.1 hypothetical protein [Gossypium davidsonii]1.2e-4379.49Show/hide
Query:  MEGQRPLVSPPVKNWGLTIASQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFES
        MEG+RPLVSP VKNWG+ I SQYA  F + LSSFMV+YSGVLGVEE H SI NLVVKLYCGDDTVGEGT GNRS+GD VGP+AQRIRA GYEPRC GFE 
Subjt:  MEGQRPLVSPPVKNWGLTIASQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFES

Query:  LLAHNRPKREGLFPLGI
        LL HNRPKREG FPLG+
Subjt:  LLAHNRPKREGLFPLGI

PPS02855.1 hypothetical protein GOBAR_AA17807 [Gossypium barbadense]1.6e-5190.52Show/hide
Query:  MEGQRPLVSPPVKNWGLTIASQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFES
        MEG+RPLVSPPVKNWGL I SQYA  FL+ LSSFMVRYSGVLGVEE HQSIPNLVVKLYC DDTVGEGTPGNRSSGD VGPVAQRIRARGYEPRCRGFES
Subjt:  MEGQRPLVSPPVKNWGLTIASQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFES

Query:  LLAHNRPKREGLFPLG
        LLAHNRPKREG FPLG
Subjt:  LLAHNRPKREGLFPLG

RZC75017.1 hypothetical protein C5167_050499 [Papaver somniferum]7.3e-4449.26Show/hide
Query:  MEGQRPLVSPPVKNWGLTIASQ---YAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFE
        MEGQRPLVSPPVKNWGLTI SQ   YAF+SCL SFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGE           +G +   I           F+
Subjt:  MEGQRPLVSPPVKNWGLTIASQ---YAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFE

Query:  SLLAHNRPKREGLFPLGIINSVVV---VGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTG----------------------------------
        +LL         L  L +IN +VV     +    +     GPSYLFLLRARVMEEGTEK+VSATTG                                  
Subjt:  SLLAHNRPKREGLFPLGIINSVVV---VGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTG----------------------------------

Query:  -------------------------RIPSPIVTKKLK-ETSETEERGESEEETDVEIETTSETKGLNRNK
                                 R+PSPIVTKKLK ET+ETEERGESE ETDVEIET SETKG  + +
Subjt:  -------------------------RIPSPIVTKKLK-ETSETEERGESEEETDVEIETTSETKGLNRNK

TrEMBL top hitse value%identityAlignment
A0A2P5XHN3 Uncharacterized protein7.8e-5290.52Show/hide
Query:  MEGQRPLVSPPVKNWGLTIASQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFES
        MEG+RPLVSPPVKNWGL I SQYA  FL+ LSSFMVRYSGVLGVEE HQSIPNLVVKLYC DDTVGEGTPGNRSSGD VGPVAQRIRARGYEPRCRGFES
Subjt:  MEGQRPLVSPPVKNWGLTIASQYA--FLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFES

Query:  LLAHNRPKREGLFPLG
        LLAHNRPKREG FPLG
Subjt:  LLAHNRPKREGLFPLG

A0A4Y7KQA8 Uncharacterized protein3.5e-4449.26Show/hide
Query:  MEGQRPLVSPPVKNWGLTIASQ---YAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFE
        MEGQRPLVSPPVKNWGLTI SQ   YAF+SCL SFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGE           +G +   I           F+
Subjt:  MEGQRPLVSPPVKNWGLTIASQ---YAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFE

Query:  SLLAHNRPKREGLFPLGIINSVVV---VGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTG----------------------------------
        +LL         L  L +IN +VV     +    +     GPSYLFLLRARVMEEGTEK+VSATTG                                  
Subjt:  SLLAHNRPKREGLFPLGIINSVVV---VGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTG----------------------------------

Query:  -------------------------RIPSPIVTKKLK-ETSETEERGESEEETDVEIETTSETKGLNRNK
                                 R+PSPIVTKKLK ET+ETEERGESE ETDVEIET SETKG  + +
Subjt:  -------------------------RIPSPIVTKKLK-ETSETEERGESEEETDVEIETTSETKGLNRNK

A0A6D2HAQ3 Uncharacterized protein4.6e-5290.35Show/hide
Query:  MEGQRPLVSPPVKNWGLTIASQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL
        MEG+R LVS PVKNW LTI SQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDTVGEGTPGN SSGDGVG VAQRIRARGYEPRCRGFESLL
Subjt:  MEGQRPLVSPPVKNWGLTIASQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL

Query:  AHNRPKREGLFPLG
        AHNRPKREG FP G
Subjt:  AHNRPKREGLFPLG

A0A6D2K9K4 Uncharacterized protein4.2e-5391.23Show/hide
Query:  MEGQRPLVSPPVKNWGLTIASQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL
        MEG+RPLVS PVKNW LTI SQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDTVGEGTPGN SSGDGVG VAQRIRARGYEPRCRGFESLL
Subjt:  MEGQRPLVSPPVKNWGLTIASQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL

Query:  AHNRPKREGLFPLG
        AHNRPKREG FP G
Subjt:  AHNRPKREGLFPLG

A0A6N2NAY5 Uncharacterized protein1.5e-5593.04Show/hide
Query:  MEGQRPLVSPPVKNWGLTIASQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL
        MEGQRPLVSP VKNWGLTI SQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCG+DTVGEG PGNRSSGD VGPVAQRIRARGYEPRCRGFESLL
Subjt:  MEGQRPLVSPPVKNWGLTIASQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLL

Query:  AHNRPKREGLFPLGI
        AHNRPKREG FPL +
Subjt:  AHNRPKREGLFPLGI

SwissProt top hitse value%identityAlignment
A0A393 Protein TIC 2141.2e-1788.68Show/hide
Query:  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGRIPSPIV
        IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTG I   ++
Subjt:  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGRIPSPIV

A0A393 Protein TIC 2146.7e-0875.56Show/hide
Query:  GRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGLNRNK
        GRIPSPI+TKKLKETS+TEE  ESEEE DVEIETTSE KG  + +
Subjt:  GRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGLNRNK

A6MM95 Protein TIC 2141.2e-1788.68Show/hide
Query:  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGRIPSPIV
        IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTG I   ++
Subjt:  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGRIPSPIV

A6MM95 Protein TIC 2143.2e-1080Show/hide
Query:  GRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGLNRNK
        GR+P+PIVTKKLKETS+TEERGESEEE DVEIETTSETKG  + +
Subjt:  GRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGLNRNK

A6MMQ5 Protein TIC 2143.5e-1786.79Show/hide
Query:  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGRIPSPIV
        IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEK+VSATTG I   ++
Subjt:  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGRIPSPIV

A6MMQ5 Protein TIC 2145.3e-0576.92Show/hide
Query:  GRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETK
        GR+PSPIVTKKLKE SETEE GESEEE++V  ETT ET+
Subjt:  GRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETK

Q09FY8 Protein TIC 2143.5e-1786.79Show/hide
Query:  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGRIPSPIV
        IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEK+VSATTG I   ++
Subjt:  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGRIPSPIV

Q09FY8 Protein TIC 2141.3e-0674.36Show/hide
Query:  GRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETK
        GR+PS +VTKK+KETS+ ++ G+SEEETDVEIETTSETK
Subjt:  GRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETK

Q7YJS6 Protein TIC 2143.5e-1786.79Show/hide
Query:  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGRIPSPIV
        IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEK+VSATTG I   ++
Subjt:  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGRIPSPIV

Q7YJS6 Protein TIC 2148.2e-0665.22Show/hide
Query:  GRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGLNRNKR
        GRIPSPI+TKKLKETSETEE  E+E+ET+VEIE  SE K   + ++
Subjt:  GRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGLNRNKR

Arabidopsis top hitse value%identityAlignment
AT2G07739.1 Ycf1 protein1.8e-1682.14Show/hide
Query:  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGRIPSPIV
        IINSVVVVGLYYGFLTTFSIGP YLFLLRARVM   EEGTEKKVSATTG I   ++
Subjt:  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGRIPSPIV

ATCG01000.1 Ycf1 protein3.6e-1783.93Show/hide
Query:  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGRIPSPIV
        IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM   EEGTEKKVSATTG I   ++
Subjt:  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGRIPSPIV

ATCG01130.1 Ycf1 protein3.6e-1783.93Show/hide
Query:  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGRIPSPIV
        IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM   EEGTEKKVSATTG I   ++
Subjt:  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGRIPSPIV

ATMG00370.1 Ycf1 protein3.6e-1783.93Show/hide
Query:  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGRIPSPIV
        IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM   EEGTEKKVSATTG I   ++
Subjt:  IINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGRIPSPIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGGCAGAGGCCTTTGGTGTCCCCTCCAGTCAAGAATTGGGGCCTCACAATCGCTAGCCAATATGCTTTTCTCTCATGCCTTTCTTCGTTCATGGTTCGATATTC
TGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGGGTACCCCCGGGAACAGATCCAGTG
GAGACGGGGTGGGGCCTGTAGCTCAGAGGATTAGAGCACGTGGCTACGAACCACGGTGTCGGGGGTTCGAATCCCTCCTCGCCCACAACCGGCCAAAAAGGGAAGGACTT
TTCCCTCTGGGGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTAT
GGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTAGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGGAAAGGGGGGAAAGCG
AGGAAGAAACAGATGTAGAAATAGAAACCACTTCCGAAACGAAGGGACTAAACAGGAACAAGAGGGATCCACCGAAGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAA
AGGAGGATCCGGACAAAATCGATGAAACGGAAGAGATCCGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGGCAGAGGCCTTTGGTGTCCCCTCCAGTCAAGAATTGGGGCCTCACAATCGCTAGCCAATATGCTTTTCTCTCATGCCTTTCTTCGTTCATGGTTCGATATTC
TGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGGGTACCCCCGGGAACAGATCCAGTG
GAGACGGGGTGGGGCCTGTAGCTCAGAGGATTAGAGCACGTGGCTACGAACCACGGTGTCGGGGGTTCGAATCCCTCCTCGCCCACAACCGGCCAAAAAGGGAAGGACTT
TTCCCTCTGGGGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTAT
GGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTAGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGGAAAGGGGGGAAAGCG
AGGAAGAAACAGATGTAGAAATAGAAACCACTTCCGAAACGAAGGGACTAAACAGGAACAAGAGGGATCCACCGAAGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAA
AGGAGGATCCGGACAAAATCGATGAAACGGAAGAGATCCGAGTGA
Protein sequenceShow/hide protein sequence
MEGQRPLVSPPVKNWGLTIASQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGEGTPGNRSSGDGVGPVAQRIRARGYEPRCRGFESLLAHNRPKREGL
FPLGIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGLNRNKRDPPKKILLLPFFRKK
RRIRTKSMKRKRSE