; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g15550 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g15550
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibosomal protein L2
Genome locationchr9:13046817..13048070
RNA-Seq ExpressionMoc09g15550
SyntenyMoc09g15550
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9660770.1 hypothetical protein SADUNF_SadunfMtG0008600 [Salix dunnii]1.6e-3477.45Show/hide
Query:  GKGVGTESRQLWIYTRKSRTRQLTYGSGAEPQHRDLGQHLFNSQSSIGSGQDGDELRLVQTFDQRLIATRPEWPYILRPYSHSEERPNGRGQSAGCFLAT
        GKG      +     RKSRTRQLTYGSGAEP+HR LGQHL+NSQSSIGS Q+ D+LRLVQTFD RLIATRPE P ILRPYSHSEERP+GRGQSAGCFLAT
Subjt:  GKGVGTESRQLWIYTRKSRTRQLTYGSGAEPQHRDLGQHLFNSQSSIGSGQDGDELRLVQTFDQRLIATRPEWPYILRPYSHSEERPNGRGQSAGCFLAT

Query:  PP
        PP
Subjt:  PP

PHT78211.1 hypothetical protein T459_16263 [Capsicum annuum]6.4e-1542.96Show/hide
Query:  MPMGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVV------------------------------------------------------------
        MPMGAGFFEKARADSETWDLGL  NEG+LFELSPPVAY+V                                                            
Subjt:  MPMGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVV------------------------------------------------------------

Query:  --------------KLTLRVSLLAQGAKHSARRPGLGAPKAF
                      KLTLRVSL AQ AKHSARRPGLGAP AF
Subjt:  --------------KLTLRVSLLAQGAKHSARRPGLGAPKAF

PNT57229.1 hypothetical protein POPTR_001G288100, partial [Populus trichocarpa]6.8e-1785.45Show/hide
Query:  GSGQDGDELRLVQTFDQRLIATRPEWPYILRPYSHSEERPNGRGQSAGCFLATPP
        GS Q+ D+LRLVQTFD RLIATRPE P ILRPYSHSEERP+GRGQSAGCFLATPP
Subjt:  GSGQDGDELRLVQTFDQRLIATRPEWPYILRPYSHSEERPNGRGQSAGCFLATPP

RWR83733.1 Ribosomal protein L2 [Cinnamomum micranthum f. kanehirae]1.7e-2078.95Show/hide
Query:  MPMGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVV--------KLTLRVSLLAQGAKHSARRPGLGAPKAF
        MPMGAGFFEKARADSETWDLGLATNEG+L ELSPP AYVV        KLTLRVSL A  AKHSARRPGLGA  AF
Subjt:  MPMGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVV--------KLTLRVSLLAQGAKHSARRPGLGAPKAF

TXG46243.1 hypothetical protein EZV62_028274 [Acer yangbiense]2.9e-1559.34Show/hide
Query:  MPMGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVV------------------------------KLTLRVSLLAQGAKHSARRPG
        MPMGAGFFEKARADS TWDLGLATNEG+LF LSPP AYVV                              KLTLRVSL A  AKHSARRPG
Subjt:  MPMGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVV------------------------------KLTLRVSLLAQGAKHSARRPG

TrEMBL top hitse value%identityAlignment
A0A2G2Z8H8 Uncharacterized protein3.1e-1542.96Show/hide
Query:  MPMGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVV------------------------------------------------------------
        MPMGAGFFEKARADSETWDLGL  NEG+LFELSPPVAY+V                                                            
Subjt:  MPMGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVV------------------------------------------------------------

Query:  --------------KLTLRVSLLAQGAKHSARRPGLGAPKAF
                      KLTLRVSL AQ AKHSARRPGLGAP AF
Subjt:  --------------KLTLRVSLLAQGAKHSARRPGLGAPKAF

A0A3S3N1M2 Ribosomal protein L28.4e-2178.95Show/hide
Query:  MPMGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVV--------KLTLRVSLLAQGAKHSARRPGLGAPKAF
        MPMGAGFFEKARADSETWDLGLATNEG+L ELSPP AYVV        KLTLRVSL A  AKHSARRPGLGA  AF
Subjt:  MPMGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVV--------KLTLRVSLLAQGAKHSARRPGLGAPKAF

A0A494G918 Uncharacterized protein3.5e-2779.76Show/hide
Query:  RKSRTRQLTYGSGAEPQHRDLGQHLFNSQSSIGSGQDGDELRLVQTFDQRLIATRPEWPYILRPYSHSEERPNGRGQSAGCFLA
        RKSRTRQLTYGSGAEP  R LGQHL+NSQSSIG GQDGDELRL      RLIA  PE PY LRPYSHSEERP+GRGQSAGCF A
Subjt:  RKSRTRQLTYGSGAEPQHRDLGQHLFNSQSSIGSGQDGDELRLVQTFDQRLIATRPEWPYILRPYSHSEERPNGRGQSAGCFLA

A0A5C7GNV6 Uncharacterized protein1.4e-1559.34Show/hide
Query:  MPMGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVV------------------------------KLTLRVSLLAQGAKHSARRPG
        MPMGAGFFEKARADS TWDLGLATNEG+LF LSPP AYVV                              KLTLRVSL A  AKHSARRPG
Subjt:  MPMGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVV------------------------------KLTLRVSLLAQGAKHSARRPG

U5GWZ5 Uncharacterized protein (Fragment)3.3e-1785.45Show/hide
Query:  GSGQDGDELRLVQTFDQRLIATRPEWPYILRPYSHSEERPNGRGQSAGCFLATPP
        GS Q+ D+LRLVQTFD RLIATRPE P ILRPYSHSEERP+GRGQSAGCFLATPP
Subjt:  GSGQDGDELRLVQTFDQRLIATRPEWPYILRPYSHSEERPNGRGQSAGCFLATPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G07715.1 Nucleic acid-binding, OB-fold-like protein4.3e-09100Show/hide
Query:  MPMGAGFFEKARADSETWDLGLATNE
        MPMGAGFFEKARADSETWDLGLATNE
Subjt:  MPMGAGFFEKARADSETWDLGLATNE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCATGGGTGCAGGATTCTTCGAAAAAGCGCGGGCTGACTCGGAGACCTGGGACCTTGGCTTAGCAACGAATGAAGGGGAGCTCTTCGAGCTTTCTCCGCCAGTGGC
TTATGTAGTGAAGCTAACCCTTCGGGTCTCGCTTCTGGCGCAGGGAGCCAAGCATTCTGCCAGACGTCCCGGCCTGGGAGCCCCGAAAGCCTTTGTTTTAGTATTGAGTA
GTACTAAAATAGCTAAGTTGACAAAGGTGAACAGCCCCCTCTTCTTTATAGTCGTAAAGGGCCTCTCAGAAAAGTTACGAAGTAACTTAGCCGTCTACAAAGGGAAAGGC
GTCGGTACGGAGTCACGTCAACTGTGGATATATACTAGGAAGAGCCGTACGAGGCAGCTCACGTACGGTTCGGGAGCCGAGCCCCAGCACAGGGACTTAGGTCAACACTT
ATTTAATAGCCAGTCATCAATTGGAAGCGGGCAAGATGGTGATGAATTGCGATTGGTCCAAACCTTCGACCAGCGACTTATTGCGACCCGCCCAGAATGGCCATACATAC
TAAGACCTTATTCACACAGCGAAGAAAGGCCGAATGGAAGGGGGCAGTCAGCTGGCTGCTTCTTGGCCACGCCCCCCTGCAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCCATGGGTGCAGGATTCTTCGAAAAAGCGCGGGCTGACTCGGAGACCTGGGACCTTGGCTTAGCAACGAATGAAGGGGAGCTCTTCGAGCTTTCTCCGCCAGTGGC
TTATGTAGTGAAGCTAACCCTTCGGGTCTCGCTTCTGGCGCAGGGAGCCAAGCATTCTGCCAGACGTCCCGGCCTGGGAGCCCCGAAAGCCTTTGTTTTAGTATTGAGTA
GTACTAAAATAGCTAAGTTGACAAAGGTGAACAGCCCCCTCTTCTTTATAGTCGTAAAGGGCCTCTCAGAAAAGTTACGAAGTAACTTAGCCGTCTACAAAGGGAAAGGC
GTCGGTACGGAGTCACGTCAACTGTGGATATATACTAGGAAGAGCCGTACGAGGCAGCTCACGTACGGTTCGGGAGCCGAGCCCCAGCACAGGGACTTAGGTCAACACTT
ATTTAATAGCCAGTCATCAATTGGAAGCGGGCAAGATGGTGATGAATTGCGATTGGTCCAAACCTTCGACCAGCGACTTATTGCGACCCGCCCAGAATGGCCATACATAC
TAAGACCTTATTCACACAGCGAAGAAAGGCCGAATGGAAGGGGGCAGTCAGCTGGCTGCTTCTTGGCCACGCCCCCCTGCAACTAG
Protein sequenceShow/hide protein sequence
MPMGAGFFEKARADSETWDLGLATNEGELFELSPPVAYVVKLTLRVSLLAQGAKHSARRPGLGAPKAFVLVLSSTKIAKLTKVNSPLFFIVVKGLSEKLRSNLAVYKGKG
VGTESRQLWIYTRKSRTRQLTYGSGAEPQHRDLGQHLFNSQSSIGSGQDGDELRLVQTFDQRLIATRPEWPYILRPYSHSEERPNGRGQSAGCFLATPPCN