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Moc09g15700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g15700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr9:13077030..13078884
RNA-Seq ExpressionMoc09g15700
SyntenyMoc09g15700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A2N9GHF6 Reverse transcriptase Ty1/copia-type domain-containing protein1.7e-1188.89Show/hide
Query:  SVARSGSLTETGTRHGKARSTSSSPEVRNVEIPLPSPVSSVRHGV
        SVARSGSLTETGTRHGKARS SSSPEVRNVE+P PSPVSSVRH +
Subjt:  SVARSGSLTETGTRHGKARSTSSSPEVRNVEIPLPSPVSSVRHGV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGCGAAGACCATTTCTGGTCGAGACGTGTTAATGAAATCCATCCCATCCGTAGCCCGCTCTGGGTCTTTAACCGAAACTGGGACTAGGCATGGAAAAGCTCGATC
AACGTCCTCCTCTCCCGAGGTTCGAAATGTGGAGATACCTTTACCGTCACCTGTTAGCTCTGTCCGCCACGGGGTGCGGAAGAAGAAAGAAAAAGCACGTCCGGCGGCTA
TTCAAATGGATCCAGTTCCTACCCGCCCGCAACCCTTCTTGGGAATGGAATCCTATCGACTGGATGAGGAGAACAACGTCGAAAGGGTTGGACCTGGCCTGCCTACAACC
AAAGCGTTAGAAGCCCTTACCTTAATTAAGGAGGCCTTTAGTAAATCTGGAGTGTTCCCTAGCTTGATTCTTTCTTTGCTTCCGTCGCTCAGTGCATCCCCACTACCGCC
CCTGACAAACTTTCTGTCTAACTGTCGAGATCTCTTGCTCGGTGTGCTCGTTACTCGTTTAGCTCGGCAAGCAAGTAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGCGAAGACCATTTCTGGTCGAGACGTGTTAATGAAATCCATCCCATCCGTAGCCCGCTCTGGGTCTTTAACCGAAACTGGGACTAGGCATGGAAAAGCTCGATC
AACGTCCTCCTCTCCCGAGGTTCGAAATGTGGAGATACCTTTACCGTCACCTGTTAGCTCTGTCCGCCACGGGGTGCGGAAGAAGAAAGAAAAAGCACGTCCGGCGGCTA
TTCAAATGGATCCAGTTCCTACCCGCCCGCAACCCTTCTTGGGAATGGAATCCTATCGACTGGATGAGGAGAACAACGTCGAAAGGGTTGGACCTGGCCTGCCTACAACC
AAAGCGTTAGAAGCCCTTACCTTAATTAAGGAGGCCTTTAGTAAATCTGGAGTGTTCCCTAGCTTGATTCTTTCTTTGCTTCCGTCGCTCAGTGCATCCCCACTACCGCC
CCTGACAAACTTTCTGTCTAACTGTCGAGATCTCTTGCTCGGTGTGCTCGTTACTCGTTTAGCTCGGCAAGCAAGTAAGTAA
Protein sequenceShow/hide protein sequence
MLAKTISGRDVLMKSIPSVARSGSLTETGTRHGKARSTSSSPEVRNVEIPLPSPVSSVRHGVRKKKEKARPAAIQMDPVPTRPQPFLGMESYRLDEENNVERVGPGLPTT
KALEALTLIKEAFSKSGVFPSLILSLLPSLSASPLPPLTNFLSNCRDLLLGVLVTRLARQASK