; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g15880 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g15880
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionNADH-ubiquinone oxidoreductase chain 5
Genome locationchr9:13143329..13144049
RNA-Seq ExpressionMoc09g15880
SyntenyMoc09g15880
Gene Ontology termsGO:0001172 - transcription, RNA-templated (biological process)
GO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003968 - RNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4096857.1 unnamed protein product [Lactuca saligna]2.7e-2665.22Show/hide
Query:  VELLIAPIFPVGSLLRQRDNCQNHLTLLLTEQPLDLHFRFGELRQGDLSLSGTFPFSSLSFPSSPGSSTEFAPFCSVGGAEVRSSGGWAVIFVVAGVELG
        VELLIAPIFPVGSLLRQRDNC NHLTLLLTEQPLD +FRFGELRQG+LSLS TFPF    FP                GAEV SSGGWAVIFVVAG +  
Subjt:  VELLIAPIFPVGSLLRQRDNCQNHLTLLLTEQPLDLHFRFGELRQGDLSLSGTFPFSSLSFPSSPGSSTEFAPFCSVGGAEVRSSGGWAVIFVVAGVELG

Query:  RLAGVVFFRADEVGS
        R AG+    A ++ S
Subjt:  RLAGVVFFRADEVGS
GER39048.1 RNA-dependent RNA polymerase [Striga asiatica]2.5e-0894.74Show/hide
Query:  SSGGWAVIFVVAGVELGRLAGVVFFRADEVGSVTEGLR
        SSGGWAVIFVVAGVE GRLAGVV FRADEVGSVTEGLR
Subjt:  SSGGWAVIFVVAGVELGRLAGVVFFRADEVGSVTEGLR
GFY99289.1 hypothetical protein Acr_13g0006900 [Actinidia rufa]2.0e-0583.33Show/hide
Query:  VDSVDESVGSEVGSAISVVDGVEGLQILVELLIAPIFPVGSL
        VDSVDES    VGSAI VVDGVEGLQILVELLIAPIFP G+L
Subjt:  VDSVDESVGSEVGSAISVVDGVEGLQILVELLIAPIFPVGSL
TrEMBL top hitse value%identityAlignment
A0A5A7Q2I0 RNA-dependent RNA polymerase1.2e-0894.74Show/hide
Query:  SSGGWAVIFVVAGVELGRLAGVVFFRADEVGSVTEGLR
        SSGGWAVIFVVAGVE GRLAGVV FRADEVGSVTEGLR
Subjt:  SSGGWAVIFVVAGVELGRLAGVVFFRADEVGSVTEGLR
A0A6S7N740 Uncharacterized protein1.3e-2665.22Show/hide
Query:  VELLIAPIFPVGSLLRQRDNCQNHLTLLLTEQPLDLHFRFGELRQGDLSLSGTFPFSSLSFPSSPGSSTEFAPFCSVGGAEVRSSGGWAVIFVVAGVELG
        VELLIAPIFPVGSLLRQRDNC NHLTLLLTEQPLD +FRFGELRQG+LSLS TFPF    FP                GAEV SSGGWAVIFVVAG +  
Subjt:  VELLIAPIFPVGSLLRQRDNCQNHLTLLLTEQPLDLHFRFGELRQGDLSLSGTFPFSSLSFPSSPGSSTEFAPFCSVGGAEVRSSGGWAVIFVVAGVELG

Query:  RLAGVVFFRADEVGS
        R AG+    A ++ S
Subjt:  RLAGVVFFRADEVGS
A0A7J0FM97 NADH-ubiquinone oxidoreductase chain 59.6e-0683.33Show/hide
Query:  VDSVDESVGSEVGSAISVVDGVEGLQILVELLIAPIFPVGSL
        VDSVDES    VGSAI VVDGVEGLQILVELLIAPIFP G+L
Subjt:  VDSVDESVGSEVGSAISVVDGVEGLQILVELLIAPIFPVGSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGTCGATACCCACTTGCTTGGAGTGCGGGCACCAGTTCATTCAGTCAATGAAGCTGCAGTCGGTTCTGATGATTATGCCGTTGATTCGGTAGATGAGTCAGTCGG
TTCGGAAGTTGGTTCAGCGATATCTGTCGTCGATGGGGTAGAGGGTCTGCAGATACTCGTCGAGCTCCTCATTGCCCCAATCTTCCCTGTAGGCTCCCTGCTCCGCCAGC
GCGACAACTGTCAAAATCATTTGACGCTTCTTCTCACTGAGCAGCCCCTCGACTTACACTTCAGGTTTGGGGAGCTCCGGCAGGGGGACTTGAGTCTCAGCGGAACCTTC
CCTTTTTCTTCTCTCTCCTTTCCCTCATCTCCCGGGTCCTCAACCGAATTTGCTCCATTTTGCTCAGTTGGGGGAGCGGAGGTACGCTCGAGCGGTGGCTGGGCAGTGAT
CTTTGTGGTAGCGGGGGTCGAACTCGGAAGGCTGGCCGGGGTTGTGTTCTTCCGAGCGGACGAGGTCGGCTCGGTGACCGAGGGCTTGCGTAGAGGCGGCATTGCGATCA
CGGGCTTGGACGTCACTTCTTCATTTCTCGGCTTTTTGGATGGGGGGCTCCTCCCCGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGTCGATACCCACTTGCTTGGAGTGCGGGCACCAGTTCATTCAGTCAATGAAGCTGCAGTCGGTTCTGATGATTATGCCGTTGATTCGGTAGATGAGTCAGTCGG
TTCGGAAGTTGGTTCAGCGATATCTGTCGTCGATGGGGTAGAGGGTCTGCAGATACTCGTCGAGCTCCTCATTGCCCCAATCTTCCCTGTAGGCTCCCTGCTCCGCCAGC
GCGACAACTGTCAAAATCATTTGACGCTTCTTCTCACTGAGCAGCCCCTCGACTTACACTTCAGGTTTGGGGAGCTCCGGCAGGGGGACTTGAGTCTCAGCGGAACCTTC
CCTTTTTCTTCTCTCTCCTTTCCCTCATCTCCCGGGTCCTCAACCGAATTTGCTCCATTTTGCTCAGTTGGGGGAGCGGAGGTACGCTCGAGCGGTGGCTGGGCAGTGAT
CTTTGTGGTAGCGGGGGTCGAACTCGGAAGGCTGGCCGGGGTTGTGTTCTTCCGAGCGGACGAGGTCGGCTCGGTGACCGAGGGCTTGCGTAGAGGCGGCATTGCGATCA
CGGGCTTGGACGTCACTTCTTCATTTCTCGGCTTTTTGGATGGGGGGCTCCTCCCCGAGTGA
Protein sequenceShow/hide protein sequence
MSVDTHLLGVRAPVHSVNEAAVGSDDYAVDSVDESVGSEVGSAISVVDGVEGLQILVELLIAPIFPVGSLLRQRDNCQNHLTLLLTEQPLDLHFRFGELRQGDLSLSGTF
PFSSLSFPSSPGSSTEFAPFCSVGGAEVRSSGGWAVIFVVAGVELGRLAGVVFFRADEVGSVTEGLRRGGIAITGLDVTSSFLGFLDGGLLPE