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Moc09g15960 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g15960
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPMD domain-containing protein
Genome locationchr9:13171387..13172549
RNA-Seq ExpressionMoc09g15960
SyntenyMoc09g15960
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2957479.1 Hypothetical predicted protein [Olea europaea subsp. europaea]1.6e-4175Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKAVTAAHVPAVWSDVAAVHVLHTSAPTTTNIGGS
        MSKPPAEQITEVG ESAGDPEKAAEQSVEG QPTECV +SAGKEVEET QSQPNR RSQGAIPTAAK               AVHVLHTSAPTT NIGGS
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKAVTAAHVPAVWSDVAAVHVLHTSAPTTTNIGGS

Query:  TAVLRVSAAATWSDTLQQHSSSDFQQPMLRHDQSTSQPILRLTASTIS
        TAVL VSAAA WSD            PMLRH QSTSQPILRLTASTIS
Subjt:  TAVLRVSAAATWSDTLQQHSSSDFQQPMLRHDQSTSQPILRLTASTIS

CAN64513.1 hypothetical protein VITISV_004352 [Vitis vinifera]2.0e-2394.03Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK
        MSKPPAEQITEVGSESAGDPEKAAE SVEGTQPTECVP+SAGKEVEET QSQPNRLRS+GAIPTAAK
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK

KAA0042452.1 hypothetical protein E6C27_scaffold46442G00020 [Cucumis melo var. makuwa]1.1e-1692.73Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNR
        MSKPPAEQITEVGSESAGDPEKAAEQSVEG QPTEC+PKSAGKEVEET +SQPNR
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNR

KAB1227959.1 hypothetical protein CJ030_MR1G013839 [Morella rubra]1.1e-2192.54Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK
        MSKPPAEQITEVG ESAGDPEKAAEQSVEGTQPTECV +SAGKEVEET QSQPNR RSQGAIPTAAK
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK

KAB1227962.1 hypothetical protein CJ030_MR1G013842 [Morella rubra]1.1e-2192.54Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK
        MSKPPAEQITEVG ESAGDPEKAAEQSVEGTQPTECV +SAGKEVEET QSQPNR RSQGAIPTAAK
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK

TrEMBL top hitse value%identityAlignment
A0A5A7TGB2 Uncharacterized protein5.2e-1792.73Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNR
        MSKPPAEQITEVGSESAGDPEKAAEQSVEG QPTEC+PKSAGKEVEET +SQPNR
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNR

A0A6A1WRP5 PMD domain-containing protein5.4e-2292.54Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK
        MSKPPAEQITEVG ESAGDPEKAAEQSVEGTQPTECV +SAGKEVEET QSQPNR RSQGAIPTAAK
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK

A0A6A1WRS3 Uncharacterized protein5.4e-2292.54Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK
        MSKPPAEQITEVG ESAGDPEKAAEQSVEGTQPTECV +SAGKEVEET QSQPNR RSQGAIPTAAK
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK

A5AFS6 Uncharacterized protein9.8e-2494.03Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK
        MSKPPAEQITEVGSESAGDPEKAAE SVEGTQPTECVP+SAGKEVEET QSQPNRLRS+GAIPTAAK
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK

F6H890 Uncharacterized protein2.4e-2291.04Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK
        MSKPPAEQITEVGSESAGDPEKAAE SVEGTQPTECVP+SAGKEVEE  QSQPNRLRS+GAIP AAK
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAGCCTCCTGCCGAGCAAATTACTGAAGTTGGTTCTGAGTCGGCTGGTGATCCAGAAAAGGCTGCTGAACAGAGTGTCGAAGGAACACAGCCTACCGAATGTGT
TCCGAAGTCCGCGGGTAAAGAAGTTGAAGAGACGGTTCAGTCGCAGCCGAACCGACTGAGATCACAGGGAGCGATCCCCACAGCCGCTAAAGCCGTTACAGCAGCCCACG
TTCCGGCAGTGTGGTCAGACGTTGCTGCAGTCCATGTCCTCCACACCTCAGCCCCAACCACAACCAACATAGGGGGCTCTACAGCGGTCCTCCGCGTCTCAGCAGCAGCA
ACCTGGAGTGACACGTTACAGCAGCATTCATCTTCGGATTTTCAGCAGCCCATGCTCAGGCATGACCAGTCCACGTCACAGCCCATTCTCAGACTGACAGCCTCTACGAT
AAGCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAGCCTCCTGCCGAGCAAATTACTGAAGTTGGTTCTGAGTCGGCTGGTGATCCAGAAAAGGCTGCTGAACAGAGTGTCGAAGGAACACAGCCTACCGAATGTGT
TCCGAAGTCCGCGGGTAAAGAAGTTGAAGAGACGGTTCAGTCGCAGCCGAACCGACTGAGATCACAGGGAGCGATCCCCACAGCCGCTAAAGCCGTTACAGCAGCCCACG
TTCCGGCAGTGTGGTCAGACGTTGCTGCAGTCCATGTCCTCCACACCTCAGCCCCAACCACAACCAACATAGGGGGCTCTACAGCGGTCCTCCGCGTCTCAGCAGCAGCA
ACCTGGAGTGACACGTTACAGCAGCATTCATCTTCGGATTTTCAGCAGCCCATGCTCAGGCATGACCAGTCCACGTCACAGCCCATTCTCAGACTGACAGCCTCTACGAT
AAGCAAGTGA
Protein sequenceShow/hide protein sequence
MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKAVTAAHVPAVWSDVAAVHVLHTSAPTTTNIGGSTAVLRVSAAA
TWSDTLQQHSSSDFQQPMLRHDQSTSQPILRLTASTISK