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Moc09g16220 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g16220
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionNADH-ubiquinone oxidoreductase chain 1
Genome locationchr9:13228827..13230498
RNA-Seq ExpressionMoc09g16220
SyntenyMoc09g16220
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA27743.1 URF-1 [Citrullus lanatus]8.6e-3163.5Show/hide
Query:  MSRPILTSLSEEPDDEASSSDKDVSDATLPARTTFSIVIFFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKGRPGARASWVGVKSR--------
        MSRPILTS       +     K +S   L  +  F    FFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKGR GARASWVGVKSR        
Subjt:  MSRPILTSLSEEPDDEASSSDKDVSDATLPARTTFSIVIFFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKGRPGARASWVGVKSR--------

Query:  -------------ALRSAAQMVPYEVSIGLILIVRLV
                     ALRSAAQMVPYEVSIGLILIVRL+
Subjt:  -------------ALRSAAQMVPYEVSIGLILIVRLV

EEF22868.1 conserved hypothetical protein, partial [Ricinus communis]1.4e-2881.18Show/hide
Query:  PNRATTWGGNGSAHMHHLMKALQSSRLLEVACQPRFPSLKTMLLTKSPSLDWGNTAMSSSLQDSTPSRAGCPAEMELEANLYFPG
        PNRATTW GNGSAHMHHLMKALQSSRLLEVACQPRFPSLK MLLTK PS  WGNTAMSSSLQDSTPSRAGC      E    F G
Subjt:  PNRATTWGGNGSAHMHHLMKALQSSRLLEVACQPRFPSLKTMLLTKSPSLDWGNTAMSSSLQDSTPSRAGCPAEMELEANLYFPG

KAB8477452.1 hypothetical protein FH972_025318 [Carpinus fangiana]1.4e-3642.04Show/hide
Query:  EEPDDEASSSDKDVSDATLPARTTFSIVIFFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKG--RPGARASWVGVKSRALRS-------AAQMV
        EEPDDEASSSDKDVSDATLPARTTFSIVIF+    +V     +   S+  +  PP  PP+      +G  R       VG+  RA+ +       A ++ 
Subjt:  EEPDDEASSSDKDVSDATLPARTTFSIVIFFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKG--RPGARASWVGVKSRALRS-------AAQMV

Query:  PYEVSIGL-------------------------ILIVRLVSAFGSAKAIARMAGAQGSWYYPGSFSKRRGAKPLGC--------LSRLGDRSAIAVLRDI
        P   S+G                           L+V   + FG A    +  G +G    PG+   RR  +              R   R+A  V+   
Subjt:  PYEVSIGL-------------------------ILIVRLVSAFGSAKAIARMAGAQGSWYYPGSFSKRRGAKPLGC--------LSRLGDRSAIAVLRDI

Query:  NQ-----GNKCRAYDDA----------ARFHFVEVPGRGKKGLPNRATTWGGNGSAHMHHLMKALQSSRLLEVACQPRFPSLKTMLLTKSPSLDWGNTAM
                 K  A + A          A + + ++  R + G PN+ATTW GNGSAHMHHLMKALQSSRLLEVACQPRFPSLKT+LLTK PSL WGNTAM
Subjt:  NQ-----GNKCRAYDDA----------ARFHFVEVPGRGKKGLPNRATTWGGNGSAHMHHLMKALQSSRLLEVACQPRFPSLKTMLLTKSPSLDWGNTAM

Query:  SSSLQDSTPSRAGC
        SSS QDSTPSRAGC
Subjt:  SSSLQDSTPSRAGC

KAF3949550.1 hypothetical protein CMV_024588 [Castanea mollissima]3.1e-2884.15Show/hide
Query:  VPGRGKKGL--PNRATTWGGNGSAHMHHLMKALQSSRLLEVACQPRFPSLKTMLLTKSPSLDWGNTAMSSSLQDSTPSRAGC
        + GRG + L  PN+ATTW GN SAHMHHLMKALQSSRLLEVACQPRFPSLKT+LLTK PSLDWGNTAMSSS QDSTPSRAGC
Subjt:  VPGRGKKGL--PNRATTWGGNGSAHMHHLMKALQSSRLLEVACQPRFPSLKTMLLTKSPSLDWGNTAMSSSLQDSTPSRAGC

P08834.1 RecName: Full=NADH-ubiquinone oxidoreductase chain 1; AltName: Full=NADH dehydrogenase subunit 1 [Citrullus lanatus]2.1e-2962.77Show/hide
Query:  MSRPILTSLSEEPDDEASSSDKDVSDATLPARTTFSIVIFFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKGRPGARASWVGVKSR--------
        MS PILTS       +     K +S   L  +  F    FFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKGR GARASWVGVKSR        
Subjt:  MSRPILTSLSEEPDDEASSSDKDVSDATLPARTTFSIVIFFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKGRPGARASWVGVKSR--------

Query:  -------------ALRSAAQMVPYEVSIGLILIVRLV
                     ALRSAAQMVPYEVSIGLILIVRL+
Subjt:  -------------ALRSAAQMVPYEVSIGLILIVRLV

TrEMBL top hitse value%identityAlignment
A0A5N6L392 Uncharacterized protein6.7e-3742.04Show/hide
Query:  EEPDDEASSSDKDVSDATLPARTTFSIVIFFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKG--RPGARASWVGVKSRALRS-------AAQMV
        EEPDDEASSSDKDVSDATLPARTTFSIVIF+    +V     +   S+  +  PP  PP+      +G  R       VG+  RA+ +       A ++ 
Subjt:  EEPDDEASSSDKDVSDATLPARTTFSIVIFFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKG--RPGARASWVGVKSRALRS-------AAQMV

Query:  PYEVSIGL-------------------------ILIVRLVSAFGSAKAIARMAGAQGSWYYPGSFSKRRGAKPLGC--------LSRLGDRSAIAVLRDI
        P   S+G                           L+V   + FG A    +  G +G    PG+   RR  +              R   R+A  V+   
Subjt:  PYEVSIGL-------------------------ILIVRLVSAFGSAKAIARMAGAQGSWYYPGSFSKRRGAKPLGC--------LSRLGDRSAIAVLRDI

Query:  NQ-----GNKCRAYDDA----------ARFHFVEVPGRGKKGLPNRATTWGGNGSAHMHHLMKALQSSRLLEVACQPRFPSLKTMLLTKSPSLDWGNTAM
                 K  A + A          A + + ++  R + G PN+ATTW GNGSAHMHHLMKALQSSRLLEVACQPRFPSLKT+LLTK PSL WGNTAM
Subjt:  NQ-----GNKCRAYDDA----------ARFHFVEVPGRGKKGLPNRATTWGGNGSAHMHHLMKALQSSRLLEVACQPRFPSLKTMLLTKSPSLDWGNTAM

Query:  SSSLQDSTPSRAGC
        SSS QDSTPSRAGC
Subjt:  SSSLQDSTPSRAGC

A0A6N2MYD6 Uncharacterized protein3.3e-3650.71Show/hide
Query:  ILTSLSEEPDDEAS-SSDKDVSDATLPARTTFSIVIFFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKGRPGARASWVGVKSRALRSAAQMVPY
        + +   +EP D    +SDKDVSDAT  ARTTFSIVIF        + +E  + S       PHAP VRLPR   GR  +++ W      ALRSAAQMV Y
Subjt:  ILTSLSEEPDDEAS-SSDKDVSDATLPARTTFSIVIFFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKGRPGARASWVGVKSRALRSAAQMVPY

Query:  EVSIGLILIVRLVSAFGSAKAIARMAGAQGSWYYPGSFS----------KRRGAKPLGCLSRLGDRSAIAVLRDINQGNKCRAYDDAARFHFVEVPGRGK
        EVSIGLILIVRL       +       AQGSWYYPG+ +            R  +     +RLGDRSAI VLR INQGNKCRAYDDAARFHF+EVP   +
Subjt:  EVSIGLILIVRLVSAFGSAKAIARMAGAQGSWYYPGSFS----------KRRGAKPLGCLSRLGDRSAIAVLRDINQGNKCRAYDDAARFHFVEVPGRGK

Query:  KGLPNRATTWG
           PNRATT G
Subjt:  KGLPNRATTWG

A0A7J0D6T1 Uncharacterized protein2.8e-2777.65Show/hide
Query:  PNRATTWGGNGSAHMHHLMKALQSSRLLEVACQPRFPSLKTMLLTKSPSLDWGNTAMSSSLQDSTPSRAGCPAEMELEANLYFPG
        PNRATTW GNGSAHMHHLMKALQ SRLLEV CQ RFPSLKTMLLTK PSL WGNTAMSSS QD TPSRAGC      E    F G
Subjt:  PNRATTWGGNGSAHMHHLMKALQSSRLLEVACQPRFPSLKTMLLTKSPSLDWGNTAMSSSLQDSTPSRAGCPAEMELEANLYFPG

B9TAM6 Uncharacterized protein2.6e-2561.15Show/hide
Query:  MSRPILTSLSEEPDDEASSSDKDVSDATLPARTTFSIVIFFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKGRPGARASWVGV-----------
        MSRPILTSLSEEP DEASSSDKDVSDATL ARTTFSIVIF    G V   K   F   K+   PP  P        +  PG     +G            
Subjt:  MSRPILTSLSEEPDDEASSSDKDVSDATLPARTTFSIVIFFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKGRPGARASWVGV-----------

Query:  KSRALRSAAQMVPYEVSIGLILIVRLVSAFGSAKAIARM
        ++RALRSAAQMV YEVSIGLILIVRLVSAFGSAKAIARM
Subjt:  KSRALRSAAQMVPYEVSIGLILIVRLVSAFGSAKAIARM

B9TMP5 Uncharacterized protein (Fragment)6.7e-2981.18Show/hide
Query:  PNRATTWGGNGSAHMHHLMKALQSSRLLEVACQPRFPSLKTMLLTKSPSLDWGNTAMSSSLQDSTPSRAGCPAEMELEANLYFPG
        PNRATTW GNGSAHMHHLMKALQSSRLLEVACQPRFPSLK MLLTK PS  WGNTAMSSSLQDSTPSRAGC      E    F G
Subjt:  PNRATTWGGNGSAHMHHLMKALQSSRLLEVACQPRFPSLKTMLLTKSPSLDWGNTAMSSSLQDSTPSRAGCPAEMELEANLYFPG

SwissProt top hitse value%identityAlignment
P08834 NADH-ubiquinone oxidoreductase chain 12.8e-3262.77Show/hide
Query:  MSRPILTSLSEEPDDEASSSDKDVSDATLPARTTFSIVIFFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKGRPGARASWVGVKSR--------
        MS PILTS       +     K +S   L  +  F    FFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKGR GARASWVGVKSR        
Subjt:  MSRPILTSLSEEPDDEASSSDKDVSDATLPARTTFSIVIFFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKGRPGARASWVGVKSR--------

Query:  -------------ALRSAAQMVPYEVSIGLILIVRLV
                     ALRSAAQMVPYEVSIGLILIVRL+
Subjt:  -------------ALRSAAQMVPYEVSIGLILIVRLV

P92544 Uncharacterized mitochondrial protein AtMg011308.2e-0874.36Show/hide
Query:  ILTSLSEEPDDEASSSDKDVSDATLPARTTFSIVIFFCG
        + +   +EPDDEASSSDKDVSDATLPARTT+SIVIF  G
Subjt:  ILTSLSEEPDDEASSSDKDVSDATLPARTTFSIVIFFCG

Arabidopsis top hitse value%identityAlignment
ATMG01130.1 hypothetical protein5.8e-0974.36Show/hide
Query:  ILTSLSEEPDDEASSSDKDVSDATLPARTTFSIVIFFCG
        + +   +EPDDEASSSDKDVSDATLPARTT+SIVIF  G
Subjt:  ILTSLSEEPDDEASSSDKDVSDATLPARTTFSIVIFFCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCGGCCGATCCTAACATCTTTATCTGAGGAGCCGGACGACGAAGCCTCCTCCTCAGATAAAGATGTCTCCGATGCGACTCTCCCGGCAAGAACCACTTTTTCTAT
TGTGATTTTTTTTTGCGGGTTCGGTCAGGTAATAGAAGCTAAGGAGAGATGCTTCCCATCAGTCAAAAGCAGATATCGCCCCCCCCATGCTCCCCCGGTCCGCTTACCGA
GGAATAGAAAGGGAAGACCAGGAGCCAGAGCTAGTTGGGTTGGGGTAAAGAGCCGAGCATTACGATCTGCAGCTCAAATGGTCCCTTATGAAGTCTCTATCGGTCTTATT
CTTATTGTGCGCCTTGTGAGCGCGTTTGGATCCGCGAAGGCAATCGCTCGGATGGCCGGGGCACAAGGGTCCTGGTACTATCCAGGCTCATTCTCCAAACGGCGCGGGGC
CAAGCCTTTAGGTTGTTTAAGTAGATTGGGTGACAGATCGGCCATAGCAGTACTCCGGGATATAAACCAGGGCAACAAATGTCGAGCATACGACGATGCCGCCCGTTTTC
ATTTCGTGGAAGTCCCCGGCAGAGGAAAGAAAGGGCTGCCGAATCGGGCCACCACTTGGGGTGGGAATGGCTCAGCCCACATGCATCATTTGATGAAAGCACTCCAGTCC
AGTCGCCTCCTCGAAGTGGCTTGTCAACCACGCTTTCCCTCCCTCAAAACAATGCTCCTCACCAAAAGCCCTTCCTTGGATTGGGGCAACACAGCAATGAGTAGTTCGCT
CCAGGACTCCACCCCCTCGAGAGCAGGATGCCCGGCCGAGATGGAGCTGGAAGCCAACCTATACTTTCCTGGGGCTTGCCCCAACATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCGGCCGATCCTAACATCTTTATCTGAGGAGCCGGACGACGAAGCCTCCTCCTCAGATAAAGATGTCTCCGATGCGACTCTCCCGGCAAGAACCACTTTTTCTAT
TGTGATTTTTTTTTGCGGGTTCGGTCAGGTAATAGAAGCTAAGGAGAGATGCTTCCCATCAGTCAAAAGCAGATATCGCCCCCCCCATGCTCCCCCGGTCCGCTTACCGA
GGAATAGAAAGGGAAGACCAGGAGCCAGAGCTAGTTGGGTTGGGGTAAAGAGCCGAGCATTACGATCTGCAGCTCAAATGGTCCCTTATGAAGTCTCTATCGGTCTTATT
CTTATTGTGCGCCTTGTGAGCGCGTTTGGATCCGCGAAGGCAATCGCTCGGATGGCCGGGGCACAAGGGTCCTGGTACTATCCAGGCTCATTCTCCAAACGGCGCGGGGC
CAAGCCTTTAGGTTGTTTAAGTAGATTGGGTGACAGATCGGCCATAGCAGTACTCCGGGATATAAACCAGGGCAACAAATGTCGAGCATACGACGATGCCGCCCGTTTTC
ATTTCGTGGAAGTCCCCGGCAGAGGAAAGAAAGGGCTGCCGAATCGGGCCACCACTTGGGGTGGGAATGGCTCAGCCCACATGCATCATTTGATGAAAGCACTCCAGTCC
AGTCGCCTCCTCGAAGTGGCTTGTCAACCACGCTTTCCCTCCCTCAAAACAATGCTCCTCACCAAAAGCCCTTCCTTGGATTGGGGCAACACAGCAATGAGTAGTTCGCT
CCAGGACTCCACCCCCTCGAGAGCAGGATGCCCGGCCGAGATGGAGCTGGAAGCCAACCTATACTTTCCTGGGGCTTGCCCCAACATCTAA
Protein sequenceShow/hide protein sequence
MSRPILTSLSEEPDDEASSSDKDVSDATLPARTTFSIVIFFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKGRPGARASWVGVKSRALRSAAQMVPYEVSIGLI
LIVRLVSAFGSAKAIARMAGAQGSWYYPGSFSKRRGAKPLGCLSRLGDRSAIAVLRDINQGNKCRAYDDAARFHFVEVPGRGKKGLPNRATTWGGNGSAHMHHLMKALQS
SRLLEVACQPRFPSLKTMLLTKSPSLDWGNTAMSSSLQDSTPSRAGCPAEMELEANLYFPGACPNI