; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g16230 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g16230
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:13233532..13234681
RNA-Seq ExpressionMoc09g16230
SyntenyMoc09g16230
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023904926.1 uncharacterized protein LOC112016628 [Quercus suber]7.3e-2443.22Show/hide
Query:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR
        +F+K +G GCP +H + YC ++C    +E  +I+ FQKSLTGPAL+WF  LD SK+ S+  L+  F+ QY +N ++ P R DL+ + ++ +ESF AY  R
Subjt:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR

Query:  WRAVAAQMRKKLFEEDSI
        WR +AAQ++  + E + I
Subjt:  WRAVAAQMRKKLFEEDSI

XP_024626776.2 uncharacterized protein LOC112416686 [Medicago truncatula]9.9e-2142.24Show/hide
Query:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR
        +FEK  G  CP  H + Y   +    +D+  +I  FQ+SLTGPA KW+T+LD +++ +F  L + F++QYSYN+D+ P RSDL+A++Q   E+F  Y  R
Subjt:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR

Query:  WRAVAAQMRKKLFEED
        WR  AAQ+  ++ E++
Subjt:  WRAVAAQMRKKLFEED

XP_039682864.1 uncharacterized protein LOC120575985 [Medicago truncatula]1.3e-2042.24Show/hide
Query:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR
        +FEK  G  CP  H + Y   +    +D+  +I  FQ+SLTGPA KW+T+LD +++ +F  L + F++QYSYN+D+ P RSDL+A++Q   E+F  Y  R
Subjt:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR

Query:  WRAVAAQMRKKLFEED
        WR  AAQ+  ++ E++
Subjt:  WRAVAAQMRKKLFEED

XP_039683822.1 LOW QUALITY PROTEIN: uncharacterized protein LOC112420119 [Medicago truncatula]5.8e-2141.38Show/hide
Query:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR
        +FEK  G  CP  H + Y   +    +D+  +I  FQ+SL  PA KW+T+LD +K+ +F  L + F++QYSYN+D+ P RSDL+A++Q+  E+F  Y  R
Subjt:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR

Query:  WRAVAAQMRKKLFEED
        WR  AAQ+  ++ E++
Subjt:  WRAVAAQMRKKLFEED

XP_039685668.1 uncharacterized protein LOC112421946 [Medicago truncatula]5.8e-2143.1Show/hide
Query:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR
        +FEK  G  CP  H + Y   +    +D+  +I  FQ+SLTGPA KW+T+LD +K+ +F  L + F++QYSYN+D+ P RSDL+A++Q   E+F  Y  R
Subjt:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR

Query:  WRAVAAQMRKKLFEED
        WR  AAQ+  ++ E++
Subjt:  WRAVAAQMRKKLFEED

TrEMBL top hitse value%identityAlignment
A0A1B5Z7G6 Retrotrans_gag domain-containing protein (Fragment)1.2e-1944.92Show/hide
Query:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR
        +FEK  G  CP SH   Y   +     ++  +I  FQ SLTG ALKW+ SLD  K+ +F  L + F+ QY YNLD+ P R  L+A+SQK  E+F  Y  R
Subjt:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR

Query:  WRAVAAQMRKKLFEEDSI
        WR VAAQ+   L +ED +
Subjt:  WRAVAAQMRKKLFEEDSI

A0A2Z6NQD6 Retrotrans_gag domain-containing protein5.3e-2045.76Show/hide
Query:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR
        +FEK  G  CP SH   Y   +     ++  +I  FQ SLTG ALKW+ SLD  K+ +F  L + F+ QY YNLD+ P R  L+A+SQK  E+F  Y  R
Subjt:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR

Query:  WRAVAAQMRKKLFEEDSI
        WR VAAQ+   L +ED I
Subjt:  WRAVAAQMRKKLFEEDSI

A0A2Z6PA57 Retrotrans_gag domain-containing protein (Fragment)1.2e-1944.92Show/hide
Query:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR
        +FEK  G  CP SH   Y   +     ++  +I  FQ SLTG ALKW+ SLD  K+ +F  L + F+ QY YNLD+ P R  L+A+SQK  E+F  Y  R
Subjt:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR

Query:  WRAVAAQMRKKLFEEDSI
        WR VAAQ+   L +ED +
Subjt:  WRAVAAQMRKKLFEEDSI

A0A2Z6PGB7 Retrotrans_gag domain-containing protein9.1e-2044.92Show/hide
Query:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR
        +FEK  G  CP SH   Y   +     ++  +I  FQ SLTG ALKW+ SLD  K+ +F  L + F+ QY YNLD+ P R  L+A+SQK  E+F  Y  R
Subjt:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR

Query:  WRAVAAQMRKKLFEEDSI
        WR VAAQ+   L +ED +
Subjt:  WRAVAAQMRKKLFEEDSI

A0A2Z6PHD8 Retrotrans_gag domain-containing protein1.2e-1944.92Show/hide
Query:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR
        +FEK  G  CP SH   Y   +     ++  +I  FQ SLTG ALKW+ SLD  K+ +F  L + F+ QY YNLD+ P R  L+A+SQK  E+F  Y  R
Subjt:  EFEKDNGKGCPISHQQAYCADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGR

Query:  WRAVAAQMRKKLFEEDSI
        WR VAAQ+   L +ED +
Subjt:  WRAVAAQMRKKLFEEDSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCGGTCAGAAGATTCGGAGGGTGAGCAGCCACCGGTTCTCACCCCCAACACTAGTACGGTCAGCACGACAACCTCGGAATCAGTCATACTTGATTTGACT
AGCCCACAGCTCGCCCCAAACCCTACCCAGCTTTCCAGGCCATCCAATCTCCGTCATTCCACTGACGCTCACCTCCAACCACCTCGCCCCTATAGCTTATGGGCA
AATCCCATTCCCCCAGCGGGGATGAACGAATATCAAAAGGGTGAAAAGGAATTCGAAAAAGACAACGGAAAAGGTTGTCCCATCTCTCATCAACAAGCCTATTGT
GCCGATGTCTGCCCTTTAGAGAAAGACGAAGGGGCTGTCATCCGATTGTTCCAGAAGAGTCTTACGGGCCCTGCACTGAAATGGTTTACGTCACTAGATCATTCT
AAGTTAGCCTCGTTTGAGCAATTATCTCAAATGTTCATCGATCAGTACTCCTACAACTTAGATGTCAAACCAAAAAGATCAGATCTCGAGGCTCTAAGTCAGAAA
GGTGATGAAAGTTTCAGTGCCTACGTAGGCAGGTGGAGGGCTGTCGCTGCCCAAATGCGAAAAAAACTCTTTGAAGAAGACTCCATCAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGCGGTCAGAAGATTCGGAGGGTGAGCAGCCACCGGTTCTCACCCCCAACACTAGTACGGTCAGCACGACAACCTCGGAATCAGTCATACTTGATTTGACT
AGCCCACAGCTCGCCCCAAACCCTACCCAGCTTTCCAGGCCATCCAATCTCCGTCATTCCACTGACGCTCACCTCCAACCACCTCGCCCCTATAGCTTATGGGCA
AATCCCATTCCCCCAGCGGGGATGAACGAATATCAAAAGGGTGAAAAGGAATTCGAAAAAGACAACGGAAAAGGTTGTCCCATCTCTCATCAACAAGCCTATTGT
GCCGATGTCTGCCCTTTAGAGAAAGACGAAGGGGCTGTCATCCGATTGTTCCAGAAGAGTCTTACGGGCCCTGCACTGAAATGGTTTACGTCACTAGATCATTCT
AAGTTAGCCTCGTTTGAGCAATTATCTCAAATGTTCATCGATCAGTACTCCTACAACTTAGATGTCAAACCAAAAAGATCAGATCTCGAGGCTCTAAGTCAGAAA
GGTGATGAAAGTTTCAGTGCCTACGTAGGCAGGTGGAGGGCTGTCGCTGCCCAAATGCGAAAAAAACTCTTTGAAGAAGACTCCATCAACTAG
Protein sequenceShow/hide protein sequence
MTRSEDSEGEQPPVLTPNTSTVSTTTSESVILDLTSPQLAPNPTQLSRPSNLRHSTDAHLQPPRPYSLWANPIPPAGMNEYQKGEKEFEKDNGKGCPISHQQAYC
ADVCPLEKDEGAVIRLFQKSLTGPALKWFTSLDHSKLASFEQLSQMFIDQYSYNLDVKPKRSDLEALSQKGDESFSAYVGRWRAVAAQMRKKLFEEDSIN