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Moc09g16480 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g16480
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibosomal protein S1
Genome locationchr9:13313400..13314649
RNA-Seq ExpressionMoc09g16480
SyntenyMoc09g16480
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QCB20452.1 ribosomal protein S1 [Actinidia chinensis]1.3e-9095.11Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV
        L SGNALQS VLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPL LLPRRFRQNRAWMELNKI +TNTKVKGFII+K KGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

XP_022974554.1 uncharacterized protein LOC111473236 [Cucurbita maxima]5.4e-9296.2Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV
        L SGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKE ILERFFIDLVAGESLI ERAAARFNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPLFLLPRRFRQNRAWMELNKI QTNTKVKGFII+KVKGGYSVAIAGFITFLPFRPLISQRISN+RFTIESINPKRTNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

YP_003587379.2 ribosomal protein S1 [Cucurbita pepo]2.3e-9094.57Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV
        LRSGNALQS VLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVG LDLVAGESLIKE ILERFFIDLVAGESLI ERAAA FNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPLF+LPRRFRQNRAWMELNKI QTNTKVKGFII+KVKGGYSVAIAGFITFLPFRPLISQRISN+RFTIESINPK TNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

YP_009706796.1 ribosomal protein S1 [Ilex pubescens]5.4e-9296.2Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV
        L SGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPL LLPRRFRQNRAWMELNKI +TNTKVKGFII+KVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

YP_009913648.1 ribosomal protein S1 [Luffa acutangula]7.7e-9196.74Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV
        L SGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPLFLLPRRFRQNRAWMELNKI QTNTKVKGFII+KVKGGYSVAIAGFITFLPFR  ISQRISNDRFTIESINPKRTNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

TrEMBL top hitse value%identityAlignment
A0A4D6FU87 Ribosomal protein S16.4e-9195.11Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV
        L SGNALQS VLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPL LLPRRFRQNRAWMELNKI +TNTKVKGFII+K KGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

A0A4D6J5C9 Ribosomal protein S16.4e-9195.11Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV
        L SGNALQS VLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPL LLPRRFRQNRAWMELNKI +TNTKVKGFII+K KGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

A0A5C2I386 Ribosomal protein S12.6e-9296.2Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV
        L SGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPL LLPRRFRQNRAWMELNKI +TNTKVKGFII+KVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

A0A6J1IHY3 uncharacterized protein LOC1114732362.6e-9296.2Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV
        L SGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKE ILERFFIDLVAGESLI ERAAARFNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPLFLLPRRFRQNRAWMELNKI QTNTKVKGFII+KVKGGYSVAIAGFITFLPFRPLISQRISN+RFTIESINPKRTNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

A0A7D5Y132 Ribosomal protein S13.7e-9196.74Show/hide
Query:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV
        L SGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVV
Subjt:  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        AGEPLFLLPRRFRQNRAWMELNKI QTNTKVKGFII+KVKGGYSVAIAGFITFLPFR  ISQRISNDRFTIESINPKRTNIVVF
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

SwissProt top hitse value%identityAlignment
P0AG69 30S ribosomal protein S11.5e-0425.13Show/hide
Query:  RSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVA
        R G+ ++  V+ + +++ LVDAG       ++ E + +P   A +F+N  G L++  G+ +          + L A E   GE   +R            
Subjt:  RSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVA

Query:  GEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISND---------RFTIESINPKRTNIVV
                 + +++ AW+ L K  +    V G I  KVKGG++V + G   FLP   L+  R   D          F +  ++ KR N+VV
Subjt:  GEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISND---------RFTIESINPKRTNIVV

P26863 Ribosomal protein S1, mitochondrial5.9e-1734.39Show/hide
Query:  GNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDV-VAG
        G+A+Q  V++L++   LVD G  TP IC Q E   VPI + ARF                                               G  DV V G
Subjt:  GNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDV-VAG

Query:  EPLFLLPR----RFRQNRAWMELNKIGQTNTK-VKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDR---FTIESINPKRTNIVV
        EP  LLP+    + ++   W+EL KI +++   VKGFI++ VKGGY+VAIAG+I FLP   L S+++   +   F+I ++ PK +NIVV
Subjt:  EPLFLLPR----RFRQNRAWMELNKIGQTNTK-VKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDR---FTIESINPKRTNIVV

P37985 30S ribosomal protein S18.8e-0524.08Show/hide
Query:  RSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVA
        R G+ ++  V+ + +++ LVDAG       ++ E + +P+    +F+N  G +++  G+ +          + L A E   GE   +R            
Subjt:  RSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVA

Query:  GEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISND---------RFTIESINPKRTNIVV
                 + +++ AW+ L K  + +  V G I  KVKGG++V + G   FLP   L+  R   D          F +  ++ KR N+VV
Subjt:  GEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISND---------RFTIESINPKRTNIVV

P57395 30S ribosomal protein S12.3e-0524.61Show/hide
Query:  RSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESL-IKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV
        R G+ ++  ++ + ++M LVDAG       ++ E + +P+    +F+N  G LD+  G+ + +    +E  F     GE+L+    A R           
Subjt:  RSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESL-IKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVV

Query:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFL--------PFRPLISQRISNDRFTIESINPKRTNIVV
                      + AW+ L K  + +  V G I  KVKGG++V +     FL        P R  I        F +  ++ KR N+VV
Subjt:  AGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFL--------PFRPLISQRISNDRFTIESINPKRTNIVV

Q6NDP1 30S ribosomal protein S11.2e-0436.71Show/hide
Query:  RQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLP-----FRPL--ISQRISNDR-FTIESINPKRTNIVV
        R+  +W +L K  Q N KV G I ++VKGG++V + G + FLP      RP+  ++  ++N + F I  ++ +R NIVV
Subjt:  RQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLP-----FRPL--ISQRISNDR-FTIESINPKRTNIVV

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGCCACTCCTTCTGAGGAGGCCCTATTTATTGGCCCATTACTTGTCCTACGAGGAGGACCCTGATGTAGTCAGGTTTGTCTACGAGGAACTTCAAAGAGCAGCCAC
ACTTGGAGCCTACGACGAAGCACTGCGTAGTGGAAACGCCTTACAATCTGAAGTTTTACGCTTAAGGGAAGAAATGTTCTTGGTGGATGCAGGACCTGGGACCCCCAGAA
TTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCGCCAGGTTTGAGAATAAGGTGGGATCCCTGGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCAA
ATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCGGCGAGCGAGCTGCCGCCAGGTTTAATGATTTGGTGGGATCCACAGATGTAGTGGCTGGTGA
ACCGCTTTTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAGATTGGGCAAACGAATACAAAGGTCAAAGGCTTTATTATTGATAAAGTAA
AAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCCGTCCTCTCATAAGTCAAAGGATATCGAATGATCGATTCACCATTGAGAGCATTAACCCC
AAAAGAACGAATATTGTGGTGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGGCCACTCCTTCTGAGGAGGCCCTATTTATTGGCCCATTACTTGTCCTACGAGGAGGACCCTGATGTAGTCAGGTTTGTCTACGAGGAACTTCAAAGAGCAGCCAC
ACTTGGAGCCTACGACGAAGCACTGCGTAGTGGAAACGCCTTACAATCTGAAGTTTTACGCTTAAGGGAAGAAATGTTCTTGGTGGATGCAGGACCTGGGACCCCCAGAA
TTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCGCCAGGTTTGAGAATAAGGTGGGATCCCTGGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCAA
ATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCGGCGAGCGAGCTGCCGCCAGGTTTAATGATTTGGTGGGATCCACAGATGTAGTGGCTGGTGA
ACCGCTTTTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAGATTGGGCAAACGAATACAAAGGTCAAAGGCTTTATTATTGATAAAGTAA
AAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCCGTCCTCTCATAAGTCAAAGGATATCGAATGATCGATTCACCATTGAGAGCATTAACCCC
AAAAGAACGAATATTGTGGTGTTCTAA
Protein sequenceShow/hide protein sequence
MRPLLLRRPYLLAHYLSYEEDPDVVRFVYEELQRAATLGAYDEALRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQ
ILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINP
KRTNIVVF