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Moc09g17430 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g17430
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr9:13826415..13827306
RNA-Seq ExpressionMoc09g17430
SyntenyMoc09g17430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_017227899.1 PREDICTED: uncharacterized protein LOC108203467 [Daucus carota subsp. sativus]4.0e-4139.53Show/hide
Query:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASIKLY---------------------------
        MPNYV+F+K+ILTKKR LGE+ETVA+TK CS+ L  K+P KMKDPGSFTIP +IG  + G+ALCDLGASI L                            
Subjt:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASIKLY---------------------------

Query:  -------------------------------KEVPIILGRPFLVTGRVLVDVHKRELTMSILDEAL-------------MEELEAEAMLEHL--EAVDTE
                                       +EVPIILGRPFL TGR L+DV   ELTM + DE +             +E+  A  + + L  + +D+ 
Subjt:  -------------------------------KEVPIILGRPFLVTGRVLVDVHKRELTMSILDEAL-------------MEELEAEAMLEHL--EAVDTE

Query:  SLTDAFEEELEDVQSE---------CINANEGFVKR--MYESLDLTNSQLRLLKPSIEEPPMLELKALPQHLKHAYLGSSETLAIIIAADLPLEKE
        S  D  E+ + +V  E          + AN    +    +ESLDL++ + +  K SI+EPP LELK LP HLK+AYLG S TL +II+A+L + +E
Subjt:  SLTDAFEEELEDVQSE---------CINANEGFVKR--MYESLDLTNSQLRLLKPSIEEPPMLELKALPQHLKHAYLGSSETLAIIIAADLPLEKE

XP_022144016.1 uncharacterized protein LOC111013805 [Momordica charantia]1.7e-5253.66Show/hide
Query:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASIKLY---------------------------
        MPNYVRFLKEILTKKR LGEYE VAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQ IGL LCD+GASI +                            
Subjt:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASIKLY---------------------------

Query:  -------------------------------KEVPIILGRPFLVTGRVLVDVHKRELTM---------------------------SILDEALMEELEAE
                                       KEVPIILGRPFL TGR LVDV+K ELTM                            ILDEALMEELE E
Subjt:  -------------------------------KEVPIILGRPFLVTGRVLVDVHKRELTM---------------------------SILDEALMEELEAE

Query:  AMLEHLEAVDTESLTDAFEEELEDVQSECINANEGFVKRMYESLDL
         MLE LEAV  +S+ +AFEEELEDV+SEC+N N+GFVK++YESLD+
Subjt:  AMLEHLEAVDTESLTDAFEEELEDVQSECINANEGFVKRMYESLDL

XP_022157452.1 uncharacterized protein LOC111024147 [Momordica charantia]1.3e-4452.16Show/hide
Query:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASIKL--------------------YKEVPIIL
        MP YV+F K++LTK+R LGE+ETV +TK C TILTSKIP KMKD GSFTIPVSIGG  IG ALCDLGASI L                    ++EVPIIL
Subjt:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASIKL--------------------YKEVPIIL

Query:  GRPFLVTGRVLVDVHKRELTMSILDEALMEELEAEAMLEHLEAVDTESLTDAFEEELEDVQSECINANEGFVKRMYESLDLTNSQLRLLKPSIEEPPMLE
        GRPFL  G  LVDVHK  +TM        + LE EAML+  E    E  +    +E+ +  S           R +E L L     + LKPS+EEPP LE
Subjt:  GRPFLVTGRVLVDVHKRELTMSILDEALMEELEAEAMLEHLEAVDTESLTDAFEEELEDVQSECINANEGFVKRMYESLDLTNSQLRLLKPSIEEPPMLE

Query:  LKALPQHLKHAYLGSSETLAIIIAADLPLEKE
        LKALPQHLK+AYLG + TL IIIAA+L   KE
Subjt:  LKALPQHLKHAYLGSSETLAIIIAADLPLEKE

XP_024022362.1 uncharacterized protein LOC112091881 [Morus notabilis]2.3e-4141.1Show/hide
Query:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASIKLY---------------------------
        MP+YV+F+K IL+KKR LGE+ETVA+T+ CS IL +++P K+KDPGSFTIP SIG Q+IG ALCDLGASI L                            
Subjt:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASIKLY---------------------------

Query:  -------------------------------KEVPIILGRPFLVTGRVLVDVHKRELTMSILDEAL-------------MEELEAEAMLEHLEAVDTESL
                                       KEVPIILGRPFL TGR L+DV K ELTM + D+ +             +EE  A  +L+ L A + E  
Subjt:  -------------------------------KEVPIILGRPFLVTGRVLVDVHKRELTMSILDEAL-------------MEELEAEAMLEHLEAVDTESL

Query:  --------TDAFEEEL-EDVQSECINANEG-----FVKRMYESLDLTNSQLRLLKPSIEEPPMLELKALPQHLKHAYLGSSETLAIIIAADL
                 D  + E+ ED   + ++  EG       +R +ESLDL+   LR  KPS+EEPP+LEL+ LP HL++AYLG S+TL +IIA+ L
Subjt:  --------TDAFEEEL-EDVQSECINANEG-----FVKRMYESLDLTNSQLRLLKPSIEEPPMLELKALPQHLKHAYLGSSETLAIIIAADL

XP_024028757.1 uncharacterized protein LOC112093792 [Morus notabilis]4.7e-4241.1Show/hide
Query:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASIKLY---------------------------
        MP+YV+F+K+ILTKKR LGE+ETVA+T+ CS IL +++P K+KDPGSFTIP SIG Q+IG ALCDLGASI L                            
Subjt:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASIKLY---------------------------

Query:  -------------------------------KEVPIILGRPFLVTGRVLVDVHKRELTMSILDEAL-------------MEELEAEAMLEHLEAVDTESL
                                       KEVPIILGRPFL TG+ L+DV K ELTM + D+ +             +EE  A  +L+ L A + E  
Subjt:  -------------------------------KEVPIILGRPFLVTGRVLVDVHKRELTMSILDEAL-------------MEELEAEAMLEHLEAVDTESL

Query:  --------TDAFEEEL-EDVQSECINANEG-----FVKRMYESLDLTNSQLRLLKPSIEEPPMLELKALPQHLKHAYLGSSETLAIIIAADL
                 D  + E+ ED   + ++  EG       +R +ESLDL+   LR  KPS+EEPP+LEL+ LP HL++AYLG S+TL +IIA+ L
Subjt:  --------TDAFEEEL-EDVQSECINANEG-----FVKRMYESLDLTNSQLRLLKPSIEEPPMLELKALPQHLKHAYLGSSETLAIIIAADL

TrEMBL top hitse value%identityAlignment
A0A2G9HYA0 Reverse transcriptase1.5e-3839.46Show/hide
Query:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASIKLY---------------------------
        MP+YV+F+K+IL+KKR LG+YETVA+T+ CS I+ +K+P K+KDPGSFTIP +IG    G ALCDLGASI L                            
Subjt:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASIKLY---------------------------

Query:  -------------------------------KEVPIILGRPFLVTGRVLVDVHKRELTM---------------------------SILDEALMEELEAE
                                        EVPIILGRPFL TGR L+DV K ELTM                           S+ D+    E  AE
Subjt:  -------------------------------KEVPIILGRPFLVTGRVLVDVHKRELTM---------------------------SILDEALMEELEAE

Query:  AMLEHLEAVDTESLTDAFEEELEDVQSECINANEGFVKRMYESLDLTNSQLRLLKPSIEEPPMLELKALPQHLKHAYLGSSETLAIIIA---ADLPLEK
          L+ LE    + L +  EE+LE V++  ++A++    R  ESL+ T    ++LKPSIE+PP LELK LP HL +AYLG S+TL +II+   +DL +EK
Subjt:  AMLEHLEAVDTESLTDAFEEELEDVQSECINANEGFVKRMYESLDLTNSQLRLLKPSIEEPPMLELKALPQHLKHAYLGSSETLAIIIA---ADLPLEK

A0A6J1CS22 uncharacterized protein LOC1110138058.4e-5353.66Show/hide
Query:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASIKLY---------------------------
        MPNYVRFLKEILTKKR LGEYE VAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQ IGL LCD+GASI +                            
Subjt:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASIKLY---------------------------

Query:  -------------------------------KEVPIILGRPFLVTGRVLVDVHKRELTM---------------------------SILDEALMEELEAE
                                       KEVPIILGRPFL TGR LVDV+K ELTM                            ILDEALMEELE E
Subjt:  -------------------------------KEVPIILGRPFLVTGRVLVDVHKRELTM---------------------------SILDEALMEELEAE

Query:  AMLEHLEAVDTESLTDAFEEELEDVQSECINANEGFVKRMYESLDL
         MLE LEAV  +S+ +AFEEELEDV+SEC+N N+GFVK++YESLD+
Subjt:  AMLEHLEAVDTESLTDAFEEELEDVQSECINANEGFVKRMYESLDL

A0A6J1DUI2 uncharacterized protein LOC1110241476.4e-4552.16Show/hide
Query:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASIKL--------------------YKEVPIIL
        MP YV+F K++LTK+R LGE+ETV +TK C TILTSKIP KMKD GSFTIPVSIGG  IG ALCDLGASI L                    ++EVPIIL
Subjt:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASIKL--------------------YKEVPIIL

Query:  GRPFLVTGRVLVDVHKRELTMSILDEALMEELEAEAMLEHLEAVDTESLTDAFEEELEDVQSECINANEGFVKRMYESLDLTNSQLRLLKPSIEEPPMLE
        GRPFL  G  LVDVHK  +TM        + LE EAML+  E    E  +    +E+ +  S           R +E L L     + LKPS+EEPP LE
Subjt:  GRPFLVTGRVLVDVHKRELTMSILDEALMEELEAEAMLEHLEAVDTESLTDAFEEELEDVQSECINANEGFVKRMYESLDLTNSQLRLLKPSIEEPPMLE

Query:  LKALPQHLKHAYLGSSETLAIIIAADLPLEKE
        LKALPQHLK+AYLG + TL IIIAA+L   KE
Subjt:  LKALPQHLKHAYLGSSETLAIIIAADLPLEKE

A0A6J1DVS9 uncharacterized protein LOC1110245275.3e-3976.67Show/hide
Query:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASIKLY--------------KEVPIILGRPFLV
        MPNY+RFLKEILTKKRTLGEYETVAMTKACSTIL SKIPAKMKDPGSFTIPVSIGGQ IGLALCDLGASI L               K+V IILGRPFL 
Subjt:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASIKLY--------------KEVPIILGRPFLV

Query:  TGRVLVDVHKRELTMSILDE
        T RVLVDVHK ELTM + D+
Subjt:  TGRVLVDVHKRELTMSILDE

A0A6J1DXL0 uncharacterized protein LOC1110254371.6e-4066.05Show/hide
Query:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASI---------KLYKEVPIILGRPFLVTGRVL
        M NYVRFLKEILTKKR LGEYETVAM KACS ILTSKIPAKMKDP SFTIPVSIGGQ IGLALCDLGASI         KL KEV IILGRPFL T RVL
Subjt:  MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASI---------KLYKEVPIILGRPFLVTGRVL

Query:  VDVHKRELTM---------------------------SILDEALMEELEAEAMLEHLEAVDT
        VDVHK  LTM                            ILDEALMEELE EAML+HL  V++
Subjt:  VDVHKRELTM---------------------------SILDEALMEELEAEAMLEHLEAVDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAATTATGTGAGGTTCCTGAAAGAGATACTCACAAAGAAGAGAACGCTGGGAGAGTATGAAACTGTAGCAATGACTAAAGCTTGCAGCACCATACTCACGAGCAA
GATTCCTGCAAAGATGAAAGATCCTGGGAGTTTTACCATACCAGTTTCAATTGGAGGACAACATATAGGACTTGCCTTATGTGATCTAGGCGCCAGCATCAAGCTCTATA
AGGAGGTTCCTATTATTCTTGGAAGACCATTCCTCGTAACTGGGAGAGTGTTGGTAGATGTCCACAAAAGAGAGCTGACAATGAGTATATTGGATGAAGCATTAATGGAG
GAGTTGGAAGCAGAAGCCATGTTGGAGCATCTAGAAGCAGTTGACACTGAAAGTCTTACCGATGCATTTGAAGAGGAACTAGAAGATGTCCAGTCAGAATGCATAAATGC
CAATGAAGGATTTGTGAAGAGAATGTATGAGTCCTTAGACCTCACAAACTCGCAGCTTAGATTACTAAAGCCATCTATTGAAGAGCCGCCAATGCTGGAGCTTAAAGCAT
TGCCGCAGCATCTGAAACATGCTTACCTGGGTTCATCAGAGACATTGGCAATTATCATAGCAGCAGACTTACCCTTGGAAAAGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAAATTATGTGAGGTTCCTGAAAGAGATACTCACAAAGAAGAGAACGCTGGGAGAGTATGAAACTGTAGCAATGACTAAAGCTTGCAGCACCATACTCACGAGCAA
GATTCCTGCAAAGATGAAAGATCCTGGGAGTTTTACCATACCAGTTTCAATTGGAGGACAACATATAGGACTTGCCTTATGTGATCTAGGCGCCAGCATCAAGCTCTATA
AGGAGGTTCCTATTATTCTTGGAAGACCATTCCTCGTAACTGGGAGAGTGTTGGTAGATGTCCACAAAAGAGAGCTGACAATGAGTATATTGGATGAAGCATTAATGGAG
GAGTTGGAAGCAGAAGCCATGTTGGAGCATCTAGAAGCAGTTGACACTGAAAGTCTTACCGATGCATTTGAAGAGGAACTAGAAGATGTCCAGTCAGAATGCATAAATGC
CAATGAAGGATTTGTGAAGAGAATGTATGAGTCCTTAGACCTCACAAACTCGCAGCTTAGATTACTAAAGCCATCTATTGAAGAGCCGCCAATGCTGGAGCTTAAAGCAT
TGCCGCAGCATCTGAAACATGCTTACCTGGGTTCATCAGAGACATTGGCAATTATCATAGCAGCAGACTTACCCTTGGAAAAGGAGTAG
Protein sequenceShow/hide protein sequence
MPNYVRFLKEILTKKRTLGEYETVAMTKACSTILTSKIPAKMKDPGSFTIPVSIGGQHIGLALCDLGASIKLYKEVPIILGRPFLVTGRVLVDVHKRELTMSILDEALME
ELEAEAMLEHLEAVDTESLTDAFEEELEDVQSECINANEGFVKRMYESLDLTNSQLRLLKPSIEEPPMLELKALPQHLKHAYLGSSETLAIIIAADLPLEKE