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Moc09g17440 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g17440
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionextensin-like
Genome locationchr9:13830683..13831515
RNA-Seq ExpressionMoc09g17440
SyntenyMoc09g17440
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154805.1 extensin-like [Momordica charantia]2.5e-1164.79Show/hide
Query:  MPRIKYKANRKSVLKLELAVSSGSSGNFKEATETIPSKASDEQSPAQQSPTSSEHTSADAEFPPPPSLVVS
        MPRIK++ANRK  LKLEL+ SSGS+G+FKEA ETIPS+A +E     QSPTSSEHT  +AE  PPP  V S
Subjt:  MPRIKYKANRKSVLKLELAVSSGSSGNFKEATETIPSKASDEQSPAQQSPTSSEHTSADAEFPPPPSLVVS
TrEMBL top hitse value%identityAlignment
A0A6J1DKP0 extensin-like1.2e-1164.79Show/hide
Query:  MPRIKYKANRKSVLKLELAVSSGSSGNFKEATETIPSKASDEQSPAQQSPTSSEHTSADAEFPPPPSLVVS
        MPRIK++ANRK  LKLEL+ SSGS+G+FKEA ETIPS+A +E     QSPTSSEHT  +AE  PPP  V S
Subjt:  MPRIKYKANRKSVLKLELAVSSGSSGNFKEATETIPSKASDEQSPAQQSPTSSEHTSADAEFPPPPSLVVS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTAGAATCAAATACAAGGCGAATAGGAAAAGTGTATTGAAGCTGGAACTCGCAGTAAGCTCTGGGTCGAGCGGCAACTTCAAGGAGGCCACTGAAACCATCCCATC
GAAGGCCTCTGATGAACAGAGCCCCGCCCAGCAAAGCCCCACCAGCTCGGAACATACTTCGGCTGACGCTGAGTTTCCGCCACCGCCTTCTCTTGTCGTCAGCCTTCGGC
GCATCACGGTGGTCCCTGCTGGCCAGGCGGCGATCCAGAAGTTCGTTGATCCAGAGGCGAGAGCGAGCTATAGAGTGATAAAGACAAGGGACTTGTACCCTGGAAAAAGG
GTTTTTGGAGGCGGAGATGCCCCAACTTGTGAAGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTAGAATCAAATACAAGGCGAATAGGAAAAGTGTATTGAAGCTGGAACTCGCAGTAAGCTCTGGGTCGAGCGGCAACTTCAAGGAGGCCACTGAAACCATCCCATC
GAAGGCCTCTGATGAACAGAGCCCCGCCCAGCAAAGCCCCACCAGCTCGGAACATACTTCGGCTGACGCTGAGTTTCCGCCACCGCCTTCTCTTGTCGTCAGCCTTCGGC
GCATCACGGTGGTCCCTGCTGGCCAGGCGGCGATCCAGAAGTTCGTTGATCCAGAGGCGAGAGCGAGCTATAGAGTGATAAAGACAAGGGACTTGTACCCTGGAAAAAGG
GTTTTTGGAGGCGGAGATGCCCCAACTTGTGAAGGATAG
Protein sequenceShow/hide protein sequence
MPRIKYKANRKSVLKLELAVSSGSSGNFKEATETIPSKASDEQSPAQQSPTSSEHTSADAEFPPPPSLVVSLRRITVVPAGQAAIQKFVDPEARASYRVIKTRDLYPGKR
VFGGGDAPTCEG