; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g17700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g17700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr9:14036816..14038231
RNA-Seq ExpressionMoc09g17700
SyntenyMoc09g17700
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]4.7e-6562.29Show/hide
Query:  MHHRLRTMEEMYAE-------ATRANRTVSPSRIPGAPGEREGRVPSFHREPVPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDLKA
        M  ++ TME+MY+E        +R+   V+ + +    G   G V   H E     E  +Y+ +  DLR+HL ++K+ +S     SPS S    NS+ +A
Subjt:  MHHRLRTMEEMYAE-------ATRANRTVSPSRIPGAPGEREGRVPSFHREPVPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDLKA

Query:  QSKYKPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECSFDDGDLGESPFTSDIVEAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAI
        +S Y P+TPE VITREEFD +K +FD QVEALKA+CEKKE SFDDGDLGESPFTSDI+EA IP KFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAI
Subjt:  QSKYKPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECSFDDGDLGESPFTSDIVEAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAI

Query:  KCRAFQIALTGSARLWYQRLPTSSISTYSQLRKEFI
        KCR FQIALTGSARLWY+RLP  SISTYSQLRKEFI
Subjt:  KCRAFQIALTGSARLWYQRLPTSSISTYSQLRKEFI

XP_022154406.1 uncharacterized protein LOC111021683 [Momordica charantia]1.1e-6681.6Show/hide
Query:  MEEMYAEATRANRTVSPSRIPGAPGEREG-RVPSFHREPVPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDLKAQSKYKPLTPEAVI
        ME+MYAEATRANRT SPS  PGAPGE+    +    REP+PN+ G+DYSLRDND+RKHLT+KKKRASREPEDS SYSR+FSNS+LKAQSKYKPL PEA+I
Subjt:  MEEMYAEATRANRTVSPSRIPGAPGEREG-RVPSFHREPVPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDLKAQSKYKPLTPEAVI

Query:  TREEFDLMKHRFDEQVEALKARCEKKECSFDDGDLGESPFTSDIVEAPIPPKFKTPTMKPYDG
        TREEFDLMKH+F EQVEALKARCEKKECSFD+GDLGESPFT DI+EAPIPPKFKTPTMKPYDG
Subjt:  TREEFDLMKHRFDEQVEALKARCEKKECSFDDGDLGESPFTSDIVEAPIPPKFKTPTMKPYDG

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]3.8e-9186.76Show/hide
Query:  IPGAPGEREG-RVPSFHREPVPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDLKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEAL
        IPGAPGE+    +   +REP+PN+EGVDYSLRDNDLRKHLTDKKK+AS EPEDS SYSREFSNS+LKAQSKYKPL PEAVI REEFDLMKHRFDEQVEAL
Subjt:  IPGAPGEREG-RVPSFHREPVPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDLKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEAL

Query:  KARCEKKECSFDDGDLGESPFTSDIVEAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLWYQRLPTSSISTYSQLR
        KARCEKKE  FDD DLGESPFTSDI+EAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAIKC AFQIALTGSARLW +RLP  SISTYSQLR
Subjt:  KARCEKKECSFDDGDLGESPFTSDIVEAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLWYQRLPTSSISTYSQLR

Query:  KEFI
        KEFI
Subjt:  KEFI

XP_022157897.1 uncharacterized protein LOC111024503 [Momordica charantia]1.6e-7693.12Show/hide
Query:  RASREPEDSPSYSREFSNSDLKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECSFDDGDLGESPFTSDIVEAPIPPKFKTPTMKPYDGS
        RASRE EDSPSYSREFSNSD KAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKA+CEKKECSFDDGDLGESPFTSDI+E PIPPKFKTPTMK YD S
Subjt:  RASREPEDSPSYSREFSNSDLKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECSFDDGDLGESPFTSDIVEAPIPPKFKTPTMKPYDGS

Query:  KDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLWYQRLPTSSISTYSQLRKEFIS
        KDPKDYVEVFEGLMDFQAATDAIKC AFQIALTGSARLWY+RLP  SISTYSQLRKEFIS
Subjt:  KDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLWYQRLPTSSISTYSQLRKEFIS

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]1.4e-6958.3Show/hide
Query:  RSAHHANQELPSAHPKPSKANRGRGGTSRKTSRRANQAADPEALSTLQRELDDMHHRLRTMEEMYAEATRANRTVSPSRIPGAPGEREGRVPSFHREPVP
        RSA     +L  AHPKP KANRGRGG SR+T+  A  A   E    LQ+E++ M  ++ TMEEMY E  +A    S S    A  ER             
Subjt:  RSAHHANQELPSAHPKPSKANRGRGGTSRKTSRRANQAADPEALSTLQRELDDMHHRLRTMEEMYAEATRANRTVSPSRIPGAPGEREGRVPSFHREPVP

Query:  NNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDLKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECSFDDGDLGESPFT
                    DLR HL+ K+  + R+   SPS S +  NS+ +A+S Y P+ PE VITREEFD +K +FD QVE LKARCE K  +FDDGDLGESPFT
Subjt:  NNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDLKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECSFDDGDLGESPFT

Query:  SDIVEAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLWYQRLPTSSISTYSQLRKEFIS
        SDI+EA IP KFKTPTMKPYDGSKDPKDYVEVFEGLM FQAATDAIK RAFQIALT SARLWY+RLP  SISTYSQLRKEF S
Subjt:  SDIVEAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLWYQRLPTSSISTYSQLRKEFIS

TrEMBL top hitse value%identityAlignment
A0A6J1DDW5 uncharacterized protein LOC1110196342.3e-6562.29Show/hide
Query:  MHHRLRTMEEMYAE-------ATRANRTVSPSRIPGAPGEREGRVPSFHREPVPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDLKA
        M  ++ TME+MY+E        +R+   V+ + +    G   G V   H E     E  +Y+ +  DLR+HL ++K+ +S     SPS S    NS+ +A
Subjt:  MHHRLRTMEEMYAE-------ATRANRTVSPSRIPGAPGEREGRVPSFHREPVPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDLKA

Query:  QSKYKPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECSFDDGDLGESPFTSDIVEAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAI
        +S Y P+TPE VITREEFD +K +FD QVEALKA+CEKKE SFDDGDLGESPFTSDI+EA IP KFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAI
Subjt:  QSKYKPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECSFDDGDLGESPFTSDIVEAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAI

Query:  KCRAFQIALTGSARLWYQRLPTSSISTYSQLRKEFI
        KCR FQIALTGSARLWY+RLP  SISTYSQLRKEFI
Subjt:  KCRAFQIALTGSARLWYQRLPTSSISTYSQLRKEFI

A0A6J1DNM4 Ribonuclease H5.4e-6781.6Show/hide
Query:  MEEMYAEATRANRTVSPSRIPGAPGEREG-RVPSFHREPVPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDLKAQSKYKPLTPEAVI
        ME+MYAEATRANRT SPS  PGAPGE+    +    REP+PN+ G+DYSLRDND+RKHLT+KKKRASREPEDS SYSR+FSNS+LKAQSKYKPL PEA+I
Subjt:  MEEMYAEATRANRTVSPSRIPGAPGEREG-RVPSFHREPVPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDLKAQSKYKPLTPEAVI

Query:  TREEFDLMKHRFDEQVEALKARCEKKECSFDDGDLGESPFTSDIVEAPIPPKFKTPTMKPYDG
        TREEFDLMKH+F EQVEALKARCEKKECSFD+GDLGESPFT DI+EAPIPPKFKTPTMKPYDG
Subjt:  TREEFDLMKHRFDEQVEALKARCEKKECSFDDGDLGESPFTSDIVEAPIPPKFKTPTMKPYDG

A0A6J1DPC9 uncharacterized protein LOC1110222801.9e-9186.76Show/hide
Query:  IPGAPGEREG-RVPSFHREPVPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDLKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEAL
        IPGAPGE+    +   +REP+PN+EGVDYSLRDNDLRKHLTDKKK+AS EPEDS SYSREFSNS+LKAQSKYKPL PEAVI REEFDLMKHRFDEQVEAL
Subjt:  IPGAPGEREG-RVPSFHREPVPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDLKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEAL

Query:  KARCEKKECSFDDGDLGESPFTSDIVEAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLWYQRLPTSSISTYSQLR
        KARCEKKE  FDD DLGESPFTSDI+EAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAIKC AFQIALTGSARLW +RLP  SISTYSQLR
Subjt:  KARCEKKECSFDDGDLGESPFTSDIVEAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLWYQRLPTSSISTYSQLR

Query:  KEFI
        KEFI
Subjt:  KEFI

A0A6J1DVR0 uncharacterized protein LOC1110245037.6e-7793.12Show/hide
Query:  RASREPEDSPSYSREFSNSDLKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECSFDDGDLGESPFTSDIVEAPIPPKFKTPTMKPYDGS
        RASRE EDSPSYSREFSNSD KAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKA+CEKKECSFDDGDLGESPFTSDI+E PIPPKFKTPTMK YD S
Subjt:  RASREPEDSPSYSREFSNSDLKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECSFDDGDLGESPFTSDIVEAPIPPKFKTPTMKPYDGS

Query:  KDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLWYQRLPTSSISTYSQLRKEFIS
        KDPKDYVEVFEGLMDFQAATDAIKC AFQIALTGSARLWY+RLP  SISTYSQLRKEFIS
Subjt:  KDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLWYQRLPTSSISTYSQLRKEFIS

A0A6J1DZJ1 uncharacterized protein LOC1110257386.9e-7058.3Show/hide
Query:  RSAHHANQELPSAHPKPSKANRGRGGTSRKTSRRANQAADPEALSTLQRELDDMHHRLRTMEEMYAEATRANRTVSPSRIPGAPGEREGRVPSFHREPVP
        RSA     +L  AHPKP KANRGRGG SR+T+  A  A   E    LQ+E++ M  ++ TMEEMY E  +A    S S    A  ER             
Subjt:  RSAHHANQELPSAHPKPSKANRGRGGTSRKTSRRANQAADPEALSTLQRELDDMHHRLRTMEEMYAEATRANRTVSPSRIPGAPGEREGRVPSFHREPVP

Query:  NNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDLKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECSFDDGDLGESPFT
                    DLR HL+ K+  + R+   SPS S +  NS+ +A+S Y P+ PE VITREEFD +K +FD QVE LKARCE K  +FDDGDLGESPFT
Subjt:  NNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDLKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKARCEKKECSFDDGDLGESPFT

Query:  SDIVEAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLWYQRLPTSSISTYSQLRKEFIS
        SDI+EA IP KFKTPTMKPYDGSKDPKDYVEVFEGLM FQAATDAIK RAFQIALT SARLWY+RLP  SISTYSQLRKEF S
Subjt:  SDIVEAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLWYQRLPTSSISTYSQLRKEFIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACCTCGGCCCTGCCGAGGAGACCGGGTTCGCCCATTATAAAAAGGCTAAGTATGGGCGTCAAGGTCTGCCCTAGTGTTCAGGTCGGATCCGGAGACCGGGTTCG
AGCAGGGCAAGAGGGAGATCTTCCACGGAGATCGGCCCACCACGCGAACCAAGAGTTACCCTCTGCTCACCCGAAACCCTCAAAGGCCAACCGAGGCCGAGGTGGGACCT
CGAGAAAGACCTCCCGAAGGGCCAACCAGGCAGCAGACCCCGAGGCTTTGTCTACTCTCCAGCGGGAGTTGGATGATATGCACCATCGGTTGCGCACAATGGAAGAAATG
TACGCCGAGGCGACGCGGGCTAACCGAACAGTGTCTCCCTCCAGGATCCCAGGCGCACCCGGAGAGAGGGAAGGCCGGGTTCCATCTTTCCACCGCGAGCCTGTTCCTAA
CAATGAGGGGGTGGATTACAGCTTGCGGGATAACGATCTGAGAAAGCACCTCACTGATAAGAAAAAGAGAGCATCTCGGGAGCCGGAAGACTCTCCGTCCTACTCCCGAG
AGTTCTCCAATTCTGACCTCAAGGCTCAATCAAAGTATAAGCCTCTAACACCAGAAGCTGTGATCACCAGGGAAGAGTTCGACCTGATGAAGCACAGATTCGACGAGCAG
GTTGAGGCGCTCAAGGCCAGGTGCGAGAAGAAAGAGTGCTCGTTTGACGATGGCGACTTGGGAGAATCGCCATTCACCTCGGACATCGTGGAGGCCCCAATTCCTCCAAA
GTTCAAAACTCCCACTATGAAACCTTATGATGGGTCTAAAGACCCGAAGGATTATGTTGAGGTCTTCGAGGGCCTCATGGACTTTCAAGCGGCAACAGATGCGATAAAAT
GCCGCGCCTTCCAGATCGCTCTCACCGGCAGCGCGCGCCTGTGGTACCAGAGACTGCCGACCAGTTCGATCTCAACCTACTCCCAGCTGAGGAAAGAATTCATTAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCACCTCGGCCCTGCCGAGGAGACCGGGTTCGCCCATTATAAAAAGGCTAAGTATGGGCGTCAAGGTCTGCCCTAGTGTTCAGGTCGGATCCGGAGACCGGGTTCG
AGCAGGGCAAGAGGGAGATCTTCCACGGAGATCGGCCCACCACGCGAACCAAGAGTTACCCTCTGCTCACCCGAAACCCTCAAAGGCCAACCGAGGCCGAGGTGGGACCT
CGAGAAAGACCTCCCGAAGGGCCAACCAGGCAGCAGACCCCGAGGCTTTGTCTACTCTCCAGCGGGAGTTGGATGATATGCACCATCGGTTGCGCACAATGGAAGAAATG
TACGCCGAGGCGACGCGGGCTAACCGAACAGTGTCTCCCTCCAGGATCCCAGGCGCACCCGGAGAGAGGGAAGGCCGGGTTCCATCTTTCCACCGCGAGCCTGTTCCTAA
CAATGAGGGGGTGGATTACAGCTTGCGGGATAACGATCTGAGAAAGCACCTCACTGATAAGAAAAAGAGAGCATCTCGGGAGCCGGAAGACTCTCCGTCCTACTCCCGAG
AGTTCTCCAATTCTGACCTCAAGGCTCAATCAAAGTATAAGCCTCTAACACCAGAAGCTGTGATCACCAGGGAAGAGTTCGACCTGATGAAGCACAGATTCGACGAGCAG
GTTGAGGCGCTCAAGGCCAGGTGCGAGAAGAAAGAGTGCTCGTTTGACGATGGCGACTTGGGAGAATCGCCATTCACCTCGGACATCGTGGAGGCCCCAATTCCTCCAAA
GTTCAAAACTCCCACTATGAAACCTTATGATGGGTCTAAAGACCCGAAGGATTATGTTGAGGTCTTCGAGGGCCTCATGGACTTTCAAGCGGCAACAGATGCGATAAAAT
GCCGCGCCTTCCAGATCGCTCTCACCGGCAGCGCGCGCCTGTGGTACCAGAGACTGCCGACCAGTTCGATCTCAACCTACTCCCAGCTGAGGAAAGAATTCATTAGCTAA
Protein sequenceShow/hide protein sequence
MSTSALPRRPGSPIIKRLSMGVKVCPSVQVGSGDRVRAGQEGDLPRRSAHHANQELPSAHPKPSKANRGRGGTSRKTSRRANQAADPEALSTLQRELDDMHHRLRTMEEM
YAEATRANRTVSPSRIPGAPGEREGRVPSFHREPVPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDLKAQSKYKPLTPEAVITREEFDLMKHRFDEQ
VEALKARCEKKECSFDDGDLGESPFTSDIVEAPIPPKFKTPTMKPYDGSKDPKDYVEVFEGLMDFQAATDAIKCRAFQIALTGSARLWYQRLPTSSISTYSQLRKEFIS