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Moc09g18110 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g18110
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr9:14296567..14299401
RNA-Seq ExpressionMoc09g18110
SyntenyMoc09g18110
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040561.1 Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa]3.1e-0550Show/hide
Query:  LTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRALTTQEEVQE
        LTMTF   DK+ I++ DP+LT   + LK M R W+ SDQG+LVE RA+    E+ E
Subjt:  LTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRALTTQEEVQE

KAA0042076.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.7e-0650.7Show/hide
Query:  LTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRAL----TTQEEVQETGTSLVTGGVE
        LTMTF    K+II+K DP+LT   M LK M +AW  +DQGYLVE RAL       EE  ETG ++V   V+
Subjt:  LTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRAL----TTQEEVQETGTSLVTGGVE

KAA0061363.1 peroxidase 64 [Cucumis melo var. makuwa]8.2e-0644.59Show/hide
Query:  LTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRAL----TTQEEVQETGTSLVTGGVEALV
        LTMTF    K+II+K DP++T   + LK + +AW  SDQGYLVE RAL       EEV E   ++V   V+ ++
Subjt:  LTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRAL----TTQEEVQETGTSLVTGGVEALV

TYK18018.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.7e-0650.7Show/hide
Query:  LTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRAL----TTQEEVQETGTSLVTGGVE
        LTMTF    K+II+K DP+LT   M LK M +AW  +DQGYLVE RAL       EE  ETG ++V   V+
Subjt:  LTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRAL----TTQEEVQETGTSLVTGGVE

XP_022154744.1 uncharacterized protein LOC111021922 [Momordica charantia]3.6e-0955.56Show/hide
Query:  ALTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRALTTQEEVQETGTSLV
        ALTM+F  G  RIILK DPTL  +E+ LK++AR WE+ DQG+LVELRA + Q E QE   +++
Subjt:  ALTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRALTTQEEVQETGTSLV

TrEMBL top hitse value%identityAlignment
A0A5A7TJB8 Retrotransposable element Tf28.0e-0750.7Show/hide
Query:  LTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRAL----TTQEEVQETGTSLVTGGVE
        LTMTF    K+II+K DP+LT   M LK M +AW  +DQGYLVE RAL       EE  ETG ++V   V+
Subjt:  LTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRAL----TTQEEVQETGTSLVTGGVE

A0A5D3C2S8 Transposon Tf2-6 polyprotein1.5e-0550Show/hide
Query:  LTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRALTTQEEVQE
        LTMTF   DK+ I++ DP+LT   + LK M R W+ SDQG+LVE RA+    E+ E
Subjt:  LTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRALTTQEEVQE

A0A5D3CU29 Peroxidase 644.0e-0644.59Show/hide
Query:  LTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRAL----TTQEEVQETGTSLVTGGVEALV
        LTMTF    K+II+K DP++T   + LK + +AW  SDQGYLVE RAL       EEV E   ++V   V+ ++
Subjt:  LTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRAL----TTQEEVQETGTSLVTGGVEALV

A0A5D3D331 Retrotransposable element Tf28.0e-0750.7Show/hide
Query:  LTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRAL----TTQEEVQETGTSLVTGGVE
        LTMTF    K+II+K DP+LT   M LK M +AW  +DQGYLVE RAL       EE  ETG ++V   V+
Subjt:  LTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRAL----TTQEEVQETGTSLVTGGVE

A0A6J1DN22 Reverse transcriptase1.7e-0955.56Show/hide
Query:  ALTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRALTTQEEVQETGTSLV
        ALTM+F  G  RIILK DPTL  +E+ LK++AR WE+ DQG+LVELRA + Q E QE   +++
Subjt:  ALTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSDQGYLVELRALTTQEEVQETGTSLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGTCGTTTGGGGCCGTCGAGATCGTTGCCGTCTCTACTGTACGAGCCTCGCCCATCTGTTCCGCCACCGCTTGCTGCTGTTCCGTTCGTCGTTGATCGGCTGTG
CATCGCCGTTAGCTGCTATCGAAGCCGCCGCCATCCACTGCTACTTCACAGATCTGCTCGAGGCGTGGATCGCTATGGGGAAGTTGGAGACAGACTGGCCCCTGCTCTGA
CTATGACCTTTACGCGAGGAGACAAGCGAATTATCTTGAAGGAGGATCCGACTCTCACACCATTGGAGATGCCTCTAAAACGGATGGCTCGTGCCTGGGAGTCCTCTGAT
CAAGGCTATCTGGTGGAACTTCGAGCGCTGACAACACAGGAAGAAGTACAAGAGACTGGAACTTCGCTAGTCACTGGAGGAGTCGAAGCTCTTGTTAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTCGTCGTTTGGGGCCGTCGAGATCGTTGCCGTCTCTACTGTACGAGCCTCGCCCATCTGTTCCGCCACCGCTTGCTGCTGTTCCGTTCGTCGTTGATCGGCTGTG
CATCGCCGTTAGCTGCTATCGAAGCCGCCGCCATCCACTGCTACTTCACAGATCTGCTCGAGGCGTGGATCGCTATGGGGAAGTTGGAGACAGACTGGCCCCTGCTCTGA
CTATGACCTTTACGCGAGGAGACAAGCGAATTATCTTGAAGGAGGATCCGACTCTCACACCATTGGAGATGCCTCTAAAACGGATGGCTCGTGCCTGGGAGTCCTCTGAT
CAAGGCTATCTGGTGGAACTTCGAGCGCTGACAACACAGGAAGAAGTACAAGAGACTGGAACTTCGCTAGTCACTGGAGGAGTCGAAGCTCTTGTTAGTTAG
Protein sequenceShow/hide protein sequence
MGRRLGPSRSLPSLLYEPRPSVPPPLAAVPFVVDRLCIAVSCYRSRRHPLLLHRSARGVDRYGEVGDRLAPALTMTFTRGDKRIILKEDPTLTPLEMPLKRMARAWESSD
QGYLVELRALTTQEEVQETGTSLVTGGVEALVS