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Moc09g18950 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g18950
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:14777070..14777360
RNA-Seq ExpressionMoc09g18950
SyntenyMoc09g18950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]3.0e-0436.36Show/hide
Query:  ERMPPERSDQVIYDATSSSQTKVSDFLFRERVWRWHRVSCDLIKIFQDVGAIYPSVRKEDFIVCAPATSGFFSVSSA
        E+M     ++V+YDA S  + K+SDF+     W W RVS +LI +++ V  + P +   D  V  P   G FS++SA
Subjt:  ERMPPERSDQVIYDATSSSQTKVSDFLFRERVWRWHRVSCDLIKIFQDVGAIYPSVRKEDFIVCAPATSGFFSVSSA

XP_022158861.1 uncharacterized protein LOC111025324 [Momordica charantia]2.4e-0951.39Show/hide
Query:  PERSDQVIYDATSSSQTKVSDFLFRERVWRWHRVSCDLIKIFQDVGAIYPSVRKEDFIVCAPATSGFFSVSS
        P   D+VIYD  SSS  KV DFL  +  WRW RVS DL+++  +V ++   V KED  V  PA SG FSVSS
Subjt:  PERSDQVIYDATSSSQTKVSDFLFRERVWRWHRVSCDLIKIFQDVGAIYPSVRKEDFIVCAPATSGFFSVSS

XP_038895844.1 uncharacterized protein LOC120084011 [Benincasa hispida]6.1e-0543.28Show/hide
Query:  VIYDATSSSQTKVSDFLFRERVWRWHRVSCDLIKIFQDVGAIYPSVRKEDFIVCAPATSGFFSVSSA
        +I+DA SS + ++S+FL  E  WRW  VS DL++I+  + A+ P +R ED+ V  P  SG  S++SA
Subjt:  VIYDATSSSQTKVSDFLFRERVWRWHRVSCDLIKIFQDVGAIYPSVRKEDFIVCAPATSGFFSVSSA

XP_038895868.1 uncharacterized protein LOC120084038 [Benincasa hispida]4.7e-0538.81Show/hide
Query:  VIYDATSSSQTKVSDFLFRERVWRWHRVSCDLIKIFQDVGAIYPSVRKEDFIVCAPATSGFFSVSSA
        ++YDA S+ + ++S+F+  E  WRW   SC+L++I+  +  + P VR ED+ V     SG+FS++SA
Subjt:  VIYDATSSSQTKVSDFLFRERVWRWHRVSCDLIKIFQDVGAIYPSVRKEDFIVCAPATSGFFSVSSA

TrEMBL top hitse value%identityAlignment
A0A5A7TKU4 Non-LTR retroelement reverse transcriptase-like protein7.3e-0436.23Show/hide
Query:  DQVIYDATSSSQTKVSDFLFRERVWRWHRVSCDLIKIFQDVGAIYPSVRKEDFIVCAPATSGFFSVSSA
        ++V+YDA S  + ++S+F+  +  W+W RVS +LI ++  V A+ P +   D  V  P   G FS++SA
Subjt:  DQVIYDATSSSQTKVSDFLFRERVWRWHRVSCDLIKIFQDVGAIYPSVRKEDFIVCAPATSGFFSVSSA

A0A5A7TZS0 Reverse transcriptase domain-containing protein1.5e-0436.36Show/hide
Query:  ERMPPERSDQVIYDATSSSQTKVSDFLFRERVWRWHRVSCDLIKIFQDVGAIYPSVRKEDFIVCAPATSGFFSVSSA
        E+M     ++V+YDA S  + K+SDF+     W W RVS +LI +++ V  + P +   D  V  P   G FS++SA
Subjt:  ERMPPERSDQVIYDATSSSQTKVSDFLFRERVWRWHRVSCDLIKIFQDVGAIYPSVRKEDFIVCAPATSGFFSVSSA

A0A5A7V4C1 Reverse transcriptase domain-containing protein9.5e-0436.76Show/hide
Query:  DQVIYDATSSSQTKVSDFLFRERVWRWHRVSCDLIKIFQDVGAIYPSVRKEDFIVCAPATSGFFSVSS
        ++V YDA S  + ++SDF+  +  W+W RVS +LI ++  V A+ P +   D  V  P   G FS++S
Subjt:  DQVIYDATSSSQTKVSDFLFRERVWRWHRVSCDLIKIFQDVGAIYPSVRKEDFIVCAPATSGFFSVSS

A0A5D3BDZ6 Zf-RVT domain-containing protein9.5e-0436.23Show/hide
Query:  DQVIYDATSSSQTKVSDFLFRERVWRWHRVSCDLIKIFQDVGAIYPSVRKEDFIVCAPATSGFFSVSSA
        ++V+YDA S  + ++SDF+     W W RVS +LI +++ V  + P +   D  V  P   G FS++SA
Subjt:  DQVIYDATSSSQTKVSDFLFRERVWRWHRVSCDLIKIFQDVGAIYPSVRKEDFIVCAPATSGFFSVSSA

A0A6J1E271 uncharacterized protein LOC1110253241.2e-0951.39Show/hide
Query:  PERSDQVIYDATSSSQTKVSDFLFRERVWRWHRVSCDLIKIFQDVGAIYPSVRKEDFIVCAPATSGFFSVSS
        P   D+VIYD  SSS  KV DFL  +  WRW RVS DL+++  +V ++   V KED  V  PA SG FSVSS
Subjt:  PERSDQVIYDATSSSQTKVSDFLFRERVWRWHRVSCDLIKIFQDVGAIYPSVRKEDFIVCAPATSGFFSVSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACCACCCCAAACGGGATGGAAAGACTCGCTTGGAGCTCAAGAACTAACCTCAGAGCGGATGCCCCCGGAACGGAGTGATCAAGTGATTTATGATGCTACTAGTTC
TTCTCAGACTAAAGTTTCTGACTTCCTTTTCCGTGAGAGGGTTTGGAGGTGGCATCGGGTGTCGTGCGATCTTATTAAGATTTTCCAAGATGTTGGAGCGATTTATCCCT
CTGTTAGGAAGGAGGATTTTATTGTTTGTGCCCCAGCAACTTCTGGTTTCTTCTCGGTGTCTAGCGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCACCACCCCAAACGGGATGGAAAGACTCGCTTGGAGCTCAAGAACTAACCTCAGAGCGGATGCCCCCGGAACGGAGTGATCAAGTGATTTATGATGCTACTAGTTC
TTCTCAGACTAAAGTTTCTGACTTCCTTTTCCGTGAGAGGGTTTGGAGGTGGCATCGGGTGTCGTGCGATCTTATTAAGATTTTCCAAGATGTTGGAGCGATTTATCCCT
CTGTTAGGAAGGAGGATTTTATTGTTTGTGCCCCAGCAACTTCTGGTTTCTTCTCGGTGTCTAGCGCTTGA
Protein sequenceShow/hide protein sequence
MPPPQTGWKDSLGAQELTSERMPPERSDQVIYDATSSSQTKVSDFLFRERVWRWHRVSCDLIKIFQDVGAIYPSVRKEDFIVCAPATSGFFSVSSA