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Moc09g19050 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g19050
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr9:14845489..14847237
RNA-Seq ExpressionMoc09g19050
SyntenyMoc09g19050
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149799.1 uncharacterized protein LOC111018145 [Momordica charantia]3.2e-4265.97Show/hide
Query:  FDPTIGGENMADLPPPPA-GVQARVVALVPSAEAQQRALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAEEWVRELEALYA
        F PT   E    L PP    V  ++V LV   EA Q A+I+NA G GG QA PP+H H PQ EA FIKDFKRYGP TFD  SE ATAAEEW+RELEALY 
Subjt:  FDPTIGGENMADLPPPPA-GVQARVVALVPSAEAQQRALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAEEWVRELEALYA

Query:  YLGCGDQFKVKGVVFMLRGETLNWWDSVAAAEDHANVPISWVRF
        YLGC DQFKVKG V MLRGE LN WDS+A AEDHANVPI W RF
Subjt:  YLGCGDQFKVKGVVFMLRGETLNWWDSVAAAEDHANVPISWVRF

XP_022156326.1 uncharacterized protein LOC111023247 [Momordica charantia]7.5e-4745.78Show/hide
Query:  MPPRRSMRLRADFDPTIGGENMADLPPPPAGVQARVVALVPSAEAQQRALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAE
        MPPR SMRLRAD DP  G                                     G GG QAPPP+H H PQ EA FIKDFKRYGPPTFD  SE ATA E
Subjt:  MPPRRSMRLRADFDPTIGGENMADLPPPPAGVQARVVALVPSAEAQQRALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAE

Query:  EWVRELEALYAYLGCGDQFKVKGVVFMLRGETLNWWDSVAAAEDHANVPISWV-----------------------------------------------
        EW+RELEALYAYLGC DQFKVKG VFMLRGE LNWWDSVAAAED+ANVPI W                                                
Subjt:  EWVRELEALYAYLGCGDQFKVKGVVFMLRGETLNWWDSVAAAEDHANVPISWV-----------------------------------------------

Query:  ------------RFVKGLHKGIRVPVDLQRPAGLLQPLRIPIWKGDDVA
                    RFVKGL KGIR PVDLQRP    + +R  +    DV+
Subjt:  ------------RFVKGLHKGIRVPVDLQRPAGLLQPLRIPIWKGDDVA

XP_022156546.1 uncharacterized protein LOC111023424 [Momordica charantia]1.8e-6153.82Show/hide
Query:  MPPRRSMRLRADFDPTIGGENMADLPPPPAGVQARVVALVPSAEAQQRALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAE
        MPPRRSMRLRAD DP   GEN+AD PPPP G QA VV   P A AQ+ ALI+N  G GGAQ  PPRH H PQ EA+FIKDFKRYGPPTF   SE AT AE
Subjt:  MPPRRSMRLRADFDPTIGGENMADLPPPPAGVQARVVALVPSAEAQQRALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAE

Query:  EWVRELEALYAYLGCGDQFKVKGVVFMLRGETLNWWDSVAAAEDHANVPISWV-----------------------------------------------
        EWVRELEALYAYLGC DQFKVKG VFMLR E LNWWDSVAA EDHANVP+ W                                                
Subjt:  EWVRELEALYAYLGCGDQFKVKGVVFMLRGETLNWWDSVAAAEDHANVPISWV-----------------------------------------------

Query:  ------------RFVKGLHKGIRVPVDLQRPAGLLQPLRIPIWKGDDVA
                    RFVKGLHKGIR  VDLQRP    + +R  +    DV+
Subjt:  ------------RFVKGLHKGIRVPVDLQRPAGLLQPLRIPIWKGDDVA

XP_022158637.1 uncharacterized protein LOC111025088 [Momordica charantia]1.1e-4581.42Show/hide
Query:  AEAQQRALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAEEWVRELEALYAYLGCGDQFKVKGVVFMLRGETLNWWDSVAAA
        AEA Q ALI+N  G GGAQA PPRHFH PQ EA+FIKDFKRYGPPTFD  SE ATAAE WVRELEALYAYLGC DQFKVKGVVFMLRGE LNWWDS+A A
Subjt:  AEAQQRALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAEEWVRELEALYAYLGCGDQFKVKGVVFMLRGETLNWWDSVAAA

Query:  EDHANVPISWVRF
        EDHANVP+ W RF
Subjt:  EDHANVPISWVRF

XP_022159307.1 uncharacterized protein LOC111025716, partial [Momordica charantia]3.5e-4479.44Show/hide
Query:  ALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAEEWVRELEALYAYLGCGDQFKVKGVVFMLRGETLNWWDSVAAAEDHANV
        AL++N  G GGAQ  PPRHFH PQ EA+FIKDFKRYGPPTFD  SE+ATAAEEWVRELEALY YLGC DQFK KG VFMLRGE LNWWDSV AAEDHANV
Subjt:  ALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAEEWVRELEALYAYLGCGDQFKVKGVVFMLRGETLNWWDSVAAAEDHANV

Query:  PISWVRF
        P +W RF
Subjt:  PISWVRF

TrEMBL top hitse value%identityAlignment
A0A6J1D841 uncharacterized protein LOC1110181451.6e-4265.97Show/hide
Query:  FDPTIGGENMADLPPPPA-GVQARVVALVPSAEAQQRALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAEEWVRELEALYA
        F PT   E    L PP    V  ++V LV   EA Q A+I+NA G GG QA PP+H H PQ EA FIKDFKRYGP TFD  SE ATAAEEW+RELEALY 
Subjt:  FDPTIGGENMADLPPPPA-GVQARVVALVPSAEAQQRALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAEEWVRELEALYA

Query:  YLGCGDQFKVKGVVFMLRGETLNWWDSVAAAEDHANVPISWVRF
        YLGC DQFKVKG V MLRGE LN WDS+A AEDHANVPI W RF
Subjt:  YLGCGDQFKVKGVVFMLRGETLNWWDSVAAAEDHANVPISWVRF

A0A6J1DUM2 uncharacterized protein LOC1110232473.6e-4745.78Show/hide
Query:  MPPRRSMRLRADFDPTIGGENMADLPPPPAGVQARVVALVPSAEAQQRALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAE
        MPPR SMRLRAD DP  G                                     G GG QAPPP+H H PQ EA FIKDFKRYGPPTFD  SE ATA E
Subjt:  MPPRRSMRLRADFDPTIGGENMADLPPPPAGVQARVVALVPSAEAQQRALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAE

Query:  EWVRELEALYAYLGCGDQFKVKGVVFMLRGETLNWWDSVAAAEDHANVPISWV-----------------------------------------------
        EW+RELEALYAYLGC DQFKVKG VFMLRGE LNWWDSVAAAED+ANVPI W                                                
Subjt:  EWVRELEALYAYLGCGDQFKVKGVVFMLRGETLNWWDSVAAAEDHANVPISWV-----------------------------------------------

Query:  ------------RFVKGLHKGIRVPVDLQRPAGLLQPLRIPIWKGDDVA
                    RFVKGL KGIR PVDLQRP    + +R  +    DV+
Subjt:  ------------RFVKGLHKGIRVPVDLQRPAGLLQPLRIPIWKGDDVA

A0A6J1DVA0 uncharacterized protein LOC1110234248.9e-6253.82Show/hide
Query:  MPPRRSMRLRADFDPTIGGENMADLPPPPAGVQARVVALVPSAEAQQRALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAE
        MPPRRSMRLRAD DP   GEN+AD PPPP G QA VV   P A AQ+ ALI+N  G GGAQ  PPRH H PQ EA+FIKDFKRYGPPTF   SE AT AE
Subjt:  MPPRRSMRLRADFDPTIGGENMADLPPPPAGVQARVVALVPSAEAQQRALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAE

Query:  EWVRELEALYAYLGCGDQFKVKGVVFMLRGETLNWWDSVAAAEDHANVPISWV-----------------------------------------------
        EWVRELEALYAYLGC DQFKVKG VFMLR E LNWWDSVAA EDHANVP+ W                                                
Subjt:  EWVRELEALYAYLGCGDQFKVKGVVFMLRGETLNWWDSVAAAEDHANVPISWV-----------------------------------------------

Query:  ------------RFVKGLHKGIRVPVDLQRPAGLLQPLRIPIWKGDDVA
                    RFVKGLHKGIR  VDLQRP    + +R  +    DV+
Subjt:  ------------RFVKGLHKGIRVPVDLQRPAGLLQPLRIPIWKGDDVA

A0A6J1DXQ7 uncharacterized protein LOC1110250885.2e-4681.42Show/hide
Query:  AEAQQRALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAEEWVRELEALYAYLGCGDQFKVKGVVFMLRGETLNWWDSVAAA
        AEA Q ALI+N  G GGAQA PPRHFH PQ EA+FIKDFKRYGPPTFD  SE ATAAE WVRELEALYAYLGC DQFKVKGVVFMLRGE LNWWDS+A A
Subjt:  AEAQQRALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAEEWVRELEALYAYLGCGDQFKVKGVVFMLRGETLNWWDSVAAA

Query:  EDHANVPISWVRF
        EDHANVP+ W RF
Subjt:  EDHANVPISWVRF

A0A6J1DZH0 uncharacterized protein LOC1110257161.7e-4479.44Show/hide
Query:  ALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAEEWVRELEALYAYLGCGDQFKVKGVVFMLRGETLNWWDSVAAAEDHANV
        AL++N  G GGAQ  PPRHFH PQ EA+FIKDFKRYGPPTFD  SE+ATAAEEWVRELEALY YLGC DQFK KG VFMLRGE LNWWDSV AAEDHANV
Subjt:  ALIDNAVGAGGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAEEWVRELEALYAYLGCGDQFKVKGVVFMLRGETLNWWDSVAAAEDHANV

Query:  PISWVRF
        P +W RF
Subjt:  PISWVRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCACAACCGGCGACGACACGACGATCCAGTTCACGACTGACCTAGTACCTAGGGTGGTCAGGAGTAGTGGTCCGGTCGGCCTTCTTGTCGTCACCTGGTACGCTTT
GTGCTTATTGTTCATGAACTTGAATGCATCATTTGAAATTGCTTTTGCCATGCCGCCCCGTCGAAGTATGAGGTTGCGTGCAGATTTCGATCCAACCATCGGTGGTGAGA
ATATGGCTGACCTCCCGCCCCCTCCGGCTGGTGTTCAGGCAAGGGTAGTTGCCCTAGTACCTTCAGCAGAGGCTCAACAGCGGGCACTGATAGATAACGCAGTTGGGGCT
GGGGGTGCACAGGCTCCGCCACCCCGACATTTTCATGCCCCTCAAGGCGAGGCCGAATTCATCAAGGATTTCAAGCGTTACGGACCCCCCACCTTTGACAGAAGGAGTGA
GGAAGCGACGGCAGCAGAAGAGTGGGTCAGAGAGCTGGAAGCTCTTTACGCATACTTGGGTTGTGGGGACCAGTTCAAGGTTAAGGGTGTGGTCTTCATGTTAAGGGGCG
AGACCCTAAATTGGTGGGACTCAGTAGCAGCGGCGGAAGACCACGCTAATGTACCGATCTCGTGGGTAAGGTTTGTTAAGGGTTTACACAAGGGGATCAGAGTGCCAGTG
GATCTTCAGCGACCCGCCGGGTTGTTGCAACCTTTAAGAATACCTATTTGGAAGGGGGACGACGTGGCGATGGACACCGGATCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCACAACCGGCGACGACACGACGATCCAGTTCACGACTGACCTAGTACCTAGGGTGGTCAGGAGTAGTGGTCCGGTCGGCCTTCTTGTCGTCACCTGGTACGCTTT
GTGCTTATTGTTCATGAACTTGAATGCATCATTTGAAATTGCTTTTGCCATGCCGCCCCGTCGAAGTATGAGGTTGCGTGCAGATTTCGATCCAACCATCGGTGGTGAGA
ATATGGCTGACCTCCCGCCCCCTCCGGCTGGTGTTCAGGCAAGGGTAGTTGCCCTAGTACCTTCAGCAGAGGCTCAACAGCGGGCACTGATAGATAACGCAGTTGGGGCT
GGGGGTGCACAGGCTCCGCCACCCCGACATTTTCATGCCCCTCAAGGCGAGGCCGAATTCATCAAGGATTTCAAGCGTTACGGACCCCCCACCTTTGACAGAAGGAGTGA
GGAAGCGACGGCAGCAGAAGAGTGGGTCAGAGAGCTGGAAGCTCTTTACGCATACTTGGGTTGTGGGGACCAGTTCAAGGTTAAGGGTGTGGTCTTCATGTTAAGGGGCG
AGACCCTAAATTGGTGGGACTCAGTAGCAGCGGCGGAAGACCACGCTAATGTACCGATCTCGTGGGTAAGGTTTGTTAAGGGTTTACACAAGGGGATCAGAGTGCCAGTG
GATCTTCAGCGACCCGCCGGGTTGTTGCAACCTTTAAGAATACCTATTTGGAAGGGGGACGACGTGGCGATGGACACCGGATCCTAG
Protein sequenceShow/hide protein sequence
MTTTGDDTTIQFTTDLVPRVVRSSGPVGLLVVTWYALCLLFMNLNASFEIAFAMPPRRSMRLRADFDPTIGGENMADLPPPPAGVQARVVALVPSAEAQQRALIDNAVGA
GGAQAPPPRHFHAPQGEAEFIKDFKRYGPPTFDRRSEEATAAEEWVRELEALYAYLGCGDQFKVKGVVFMLRGETLNWWDSVAAAEDHANVPISWVRFVKGLHKGIRVPV
DLQRPAGLLQPLRIPIWKGDDVAMDTGS