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Moc09g19200 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g19200
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationchr9:14964656..14968281
RNA-Seq ExpressionMoc09g19200
SyntenyMoc09g19200
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141932.1 uncharacterized protein LOC111012188 [Momordica charantia]6.5e-0852.75Show/hide
Query:  SQQDVDESPVQEQEGVFGRVDEPNEAMEESSSSSSKLKSPSLSSLNVSDPNFVATANTLEEKVCLT-QVAKKIRKKKNVEEIAPGAISKPS
        SQ D +E+PVQ QEG     D PNEA +ESSSSSSK  + S SSLNV DPNFVA A   EE+ CLT Q  +K+R K  + +  P    +PS
Subjt:  SQQDVDESPVQEQEGVFGRVDEPNEAMEESSSSSSKLKSPSLSSLNVSDPNFVATANTLEEKVCLT-QVAKKIRKKKNVEEIAPGAISKPS

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]9.3e-0773.47Show/hide
Query:  SQYEVRVRTPVHESQQDVDESPVQEQEGVFGRVDEPNEAMEESSSSSSK
        SQYEV+VRTPVHESQQ  +E P +EQEG  G VD P+EAMEESSSSSS+
Subjt:  SQYEVRVRTPVHESQQDVDESPVQEQEGVFGRVDEPNEAMEESSSSSSK

XP_022156786.1 uncharacterized protein LOC111023620 [Momordica charantia]4.9e-2476.09Show/hide
Query:  VHESQQDVDESPVQEQEGVFGRVDEPNEAMEESSSSSSKLKSPSLSSLNVSDPNFVATANTLEEKVCLTQVAKKIRKKKNVEEIAPGAISKP
        +HESQQD +ES VQEQEG  G VD PNEA+EESSSSSSK KSPSLSSLNVSDPNFVA A T EEKVCLT+V KK R KKN++EI PGA S+P
Subjt:  VHESQQDVDESPVQEQEGVFGRVDEPNEAMEESSSSSSKLKSPSLSSLNVSDPNFVATANTLEEKVCLTQVAKKIRKKKNVEEIAPGAISKP

XP_022156935.1 uncharacterized protein LOC111023761 [Momordica charantia]3.2e-1558.14Show/hide
Query:  QLNRVSGDFEHDMEPLEHSDSAMVEIHCQIAFGAILEDTPPATIQGKDNIKFPEILVALNEARGENSLEDDRNSGQHKKYWMLREK
        Q   VSGD EHDMEPLEHSDSA V+I CQIA   I+ +TPPAT+Q        E+LVALNEARGE+ L+DD NSGQ  +  + +E+
Subjt:  QLNRVSGDFEHDMEPLEHSDSAMVEIHCQIAFGAILEDTPPATIQGKDNIKFPEILVALNEARGENSLEDDRNSGQHKKYWMLREK

XP_022156935.1 uncharacterized protein LOC111023761 [Momordica charantia]1.3e-1156.25Show/hide
Query:  EVRVRTPVHE---SQQDVDESPVQEQEGVFGRVDEPNEAMEESSSSSSKLKSPSLSSLNVSDPNFVATANTLEEKVCLTQVAKKIRKKKNVEEIAP
        E R   P+ +   S QD +E   QEQEG  G +D  +EAMEESSSS S+ K+ SLSSLNVSDPNFVATA   +E+V L +V KK +KKK V EI P
Subjt:  EVRVRTPVHE---SQQDVDESPVQEQEGVFGRVDEPNEAMEESSSSSSKLKSPSLSSLNVSDPNFVATANTLEEKVCLTQVAKKIRKKKNVEEIAP

XP_022156935.1 uncharacterized protein LOC111023761 [Momordica charantia]1.4e-1072.58Show/hide
Query:  MEESSSSSSKLKSPSLSSLNVSDPNFVATANTLEEKVCLTQVAKKIRKKKNVEEIAPGAISK
        MEESSS SS+ K+PSLSSLNVSDPNFVAT     ++VCLT+V KK RKKKNV EIAP AIS+
Subjt:  MEESSSSSSKLKSPSLSSLNVSDPNFVATANTLEEKVCLTQVAKKIRKKKNVEEIAPGAISK

TrEMBL top hitse value%identityAlignment
A0A6J1CL76 uncharacterized protein LOC1110121883.1e-0852.75Show/hide
Query:  SQQDVDESPVQEQEGVFGRVDEPNEAMEESSSSSSKLKSPSLSSLNVSDPNFVATANTLEEKVCLT-QVAKKIRKKKNVEEIAPGAISKPS
        SQ D +E+PVQ QEG     D PNEA +ESSSSSSK  + S SSLNV DPNFVA A   EE+ CLT Q  +K+R K  + +  P    +PS
Subjt:  SQQDVDESPVQEQEGVFGRVDEPNEAMEESSSSSSKLKSPSLSSLNVSDPNFVATANTLEEKVCLT-QVAKKIRKKKNVEEIAPGAISKPS

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220074.5e-0773.47Show/hide
Query:  SQYEVRVRTPVHESQQDVDESPVQEQEGVFGRVDEPNEAMEESSSSSSK
        SQYEV+VRTPVHESQQ  +E P +EQEG  G VD P+EAMEESSSSSS+
Subjt:  SQYEVRVRTPVHESQQDVDESPVQEQEGVFGRVDEPNEAMEESSSSSSK

A0A6J1DRR9 uncharacterized protein LOC1110237611.5e-1558.14Show/hide
Query:  QLNRVSGDFEHDMEPLEHSDSAMVEIHCQIAFGAILEDTPPATIQGKDNIKFPEILVALNEARGENSLEDDRNSGQHKKYWMLREK
        Q   VSGD EHDMEPLEHSDSA V+I CQIA   I+ +TPPAT+Q        E+LVALNEARGE+ L+DD NSGQ  +  + +E+
Subjt:  QLNRVSGDFEHDMEPLEHSDSAMVEIHCQIAFGAILEDTPPATIQGKDNIKFPEILVALNEARGENSLEDDRNSGQHKKYWMLREK

A0A6J1DRR9 uncharacterized protein LOC1110237616.1e-1256.25Show/hide
Query:  EVRVRTPVHE---SQQDVDESPVQEQEGVFGRVDEPNEAMEESSSSSSKLKSPSLSSLNVSDPNFVATANTLEEKVCLTQVAKKIRKKKNVEEIAP
        E R   P+ +   S QD +E   QEQEG  G +D  +EAMEESSSS S+ K+ SLSSLNVSDPNFVATA   +E+V L +V KK +KKK V EI P
Subjt:  EVRVRTPVHE---SQQDVDESPVQEQEGVFGRVDEPNEAMEESSSSSSKLKSPSLSSLNVSDPNFVATANTLEEKVCLTQVAKKIRKKKNVEEIAP

A0A6J1DRR9 uncharacterized protein LOC1110237616.7e-1172.58Show/hide
Query:  MEESSSSSSKLKSPSLSSLNVSDPNFVATANTLEEKVCLTQVAKKIRKKKNVEEIAPGAISK
        MEESSS SS+ K+PSLSSLNVSDPNFVAT     ++VCLT+V KK RKKKNV EIAP AIS+
Subjt:  MEESSSSSSKLKSPSLSSLNVSDPNFVATANTLEEKVCLTQVAKKIRKKKNVEEIAPGAISK

A0A6J1DW11 uncharacterized protein LOC1110236202.4e-2476.09Show/hide
Query:  VHESQQDVDESPVQEQEGVFGRVDEPNEAMEESSSSSSKLKSPSLSSLNVSDPNFVATANTLEEKVCLTQVAKKIRKKKNVEEIAPGAISKP
        +HESQQD +ES VQEQEG  G VD PNEA+EESSSSSSK KSPSLSSLNVSDPNFVA A T EEKVCLT+V KK R KKN++EI PGA S+P
Subjt:  VHESQQDVDESPVQEQEGVFGRVDEPNEAMEESSSSSSKLKSPSLSSLNVSDPNFVATANTLEEKVCLTQVAKKIRKKKNVEEIAPGAISKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGCTCTTCCTCCTCCAAGCCTTGCGACAAAGAGAAGGGGAAGAAAATGTGTTGTTGCCGCCACCAACTAAACCGGGTTAGTGGAGACTTTGAACACGACATGGA
ACCCTTGGAGCATTCAGATTCGGCCATGGTCGAAATACACTGCCAAATTGCGTTTGGCGCAATTTTGGAGGACACTCCACCAGCCACTATACAAGGAAAGGACAACATCA
AATTTCCCGAAATTTTGGTCGCTTTGAATGAAGCAAGAGGGGAAAATTCATTGGAGGATGATAGAAACAGTGGGCAGCATAAGAAATATTGGATGTTGAGGGAGAAAATG
AAGATCTTGGAGAATTACCCTATGAACGGCGGCCTCCTCCTCGCAGCGGCGCACGACGGACTGTTACAGTGGCGGACCGGCGGTGCGACTCCCCGACGTTCCGACGGTCT
GCAGCAGCGGCGGCACGTCCAGGCGGTCTGCAATGAACCAGCGCAGCATCCTCATCGCGGCGGCGCACGGCGAACGATCGGTACAGCAGCTAAACGACGGCGACTTGCTG
CTCGATCCGACGAACAACAACTCCAGCGGCGGGATTTGTACGTTACAGCAGTGTTTAGGACGTTGGCGGTGACCCACATTCGTTCGAAGCTCGATTTAGGCTACCCACAC
CTTGGCGAGCTAGATCTAGGTGACCCACATCTATACGAAGTCGGTTTTGGTGGTGTGAGGTTGACGCAAAACTTAAGGGCGCGATTGTGTGGCCTCGAGTATAAATGGTC
GGGGGCTGATATGTCACTAATGGAGTATCGAGGCCTCAGGTATAAATGGTCGAGGGTCGATACGAGGAGTCCTTTGGAAGGAAGTCTGTTGGGGCCTTGGTCTGGGTCGT
TACAATCTCAATATGAAGTGAGAGTACGTACTCCGGTGCATGAGTCACAGCAAGATGTTGATGAGTCCCCTGTACAAGAGCAAGAAGGAGTATTCGGTCGTGTGGATGAA
CCTAATGAGGCCATGGAGGAATCATCTTCGTCATCCTCAAAACTTAAGTCCCCTTCTTTATCGAGTTTGAATGTTTCTGACCCAAACTTCGTTGCTACTGCAAACACCTT
AGAGGAGAAGGTGTGCTTGACCCAAGTGGCGAAGAAAATACGAAAGAAGAAAAATGTTGAAGAAATTGCGCCTGGTGCAATTTCCAAGCCAAGTCGAGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGCTCTTCCTCCTCCAAGCCTTGCGACAAAGAGAAGGGGAAGAAAATGTGTTGTTGCCGCCACCAACTAAACCGGGTTAGTGGAGACTTTGAACACGACATGGA
ACCCTTGGAGCATTCAGATTCGGCCATGGTCGAAATACACTGCCAAATTGCGTTTGGCGCAATTTTGGAGGACACTCCACCAGCCACTATACAAGGAAAGGACAACATCA
AATTTCCCGAAATTTTGGTCGCTTTGAATGAAGCAAGAGGGGAAAATTCATTGGAGGATGATAGAAACAGTGGGCAGCATAAGAAATATTGGATGTTGAGGGAGAAAATG
AAGATCTTGGAGAATTACCCTATGAACGGCGGCCTCCTCCTCGCAGCGGCGCACGACGGACTGTTACAGTGGCGGACCGGCGGTGCGACTCCCCGACGTTCCGACGGTCT
GCAGCAGCGGCGGCACGTCCAGGCGGTCTGCAATGAACCAGCGCAGCATCCTCATCGCGGCGGCGCACGGCGAACGATCGGTACAGCAGCTAAACGACGGCGACTTGCTG
CTCGATCCGACGAACAACAACTCCAGCGGCGGGATTTGTACGTTACAGCAGTGTTTAGGACGTTGGCGGTGACCCACATTCGTTCGAAGCTCGATTTAGGCTACCCACAC
CTTGGCGAGCTAGATCTAGGTGACCCACATCTATACGAAGTCGGTTTTGGTGGTGTGAGGTTGACGCAAAACTTAAGGGCGCGATTGTGTGGCCTCGAGTATAAATGGTC
GGGGGCTGATATGTCACTAATGGAGTATCGAGGCCTCAGGTATAAATGGTCGAGGGTCGATACGAGGAGTCCTTTGGAAGGAAGTCTGTTGGGGCCTTGGTCTGGGTCGT
TACAATCTCAATATGAAGTGAGAGTACGTACTCCGGTGCATGAGTCACAGCAAGATGTTGATGAGTCCCCTGTACAAGAGCAAGAAGGAGTATTCGGTCGTGTGGATGAA
CCTAATGAGGCCATGGAGGAATCATCTTCGTCATCCTCAAAACTTAAGTCCCCTTCTTTATCGAGTTTGAATGTTTCTGACCCAAACTTCGTTGCTACTGCAAACACCTT
AGAGGAGAAGGTGTGCTTGACCCAAGTGGCGAAGAAAATACGAAAGAAGAAAAATGTTGAAGAAATTGCGCCTGGTGCAATTTCCAAGCCAAGTCGAGGCTAG
Protein sequenceShow/hide protein sequence
MEGSSSSKPCDKEKGKKMCCCRHQLNRVSGDFEHDMEPLEHSDSAMVEIHCQIAFGAILEDTPPATIQGKDNIKFPEILVALNEARGENSLEDDRNSGQHKKYWMLREKM
KILENYPMNGGLLLAAAHDGLLQWRTGGATPRRSDGLQQRRHVQAVCNEPAQHPHRGGARRTIGTAAKRRRLAARSDEQQLQRRDLYVTAVFRTLAVTHIRSKLDLGYPH
LGELDLGDPHLYEVGFGGVRLTQNLRARLCGLEYKWSGADMSLMEYRGLRYKWSRVDTRSPLEGSLLGPWSGSLQSQYEVRVRTPVHESQQDVDESPVQEQEGVFGRVDE
PNEAMEESSSSSSKLKSPSLSSLNVSDPNFVATANTLEEKVCLTQVAKKIRKKKNVEEIAPGAISKPSRG