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Moc09g19250 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g19250
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr9:14996108..14996512
RNA-Seq ExpressionMoc09g19250
SyntenyMoc09g19250
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]1.1e-4471.64Show/hide
Query:  MVQAAGARSRSRDQVVQEDEHEQGDLYLDPVDEEYPRGDENAEYIRQKSDLRDHLNRKRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDP
        MVQAAGARSRS ++V + D HEQ   +L PV + +P G E+ EY  Q+ DLR+HLNRKRSSSLR+G++P+CSH+NSNQQAESSYNPI PEGVITREEFD 
Subjt:  MVQAAGARSRSRDQVVQEDEHEQGDLYLDPVDEEYPRGDENAEYIRQKSDLRDHLNRKRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDP

Query:  LKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT
        LKSKF+ +VEALKA+CEKKES+FDDGDLG+SPFT
Subjt:  LKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT

XP_022152033.1 uncharacterized protein LOC111019842 [Momordica charantia]4.6e-1964.94Show/hide
Query:  KRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDPLKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT
        +R SSLR+G++P+ SH++SNQQAESS+NP  P GVITREEFD L+ K + +VEALKA+CE+KE + +DGDLG+SPFT
Subjt:  KRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDPLKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT

XP_022155128.1 uncharacterized protein LOC111022267 [Momordica charantia]9.0e-3174.74Show/hide
Query:  ENAEYIRQKSDLRDHLNRKRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDPLKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT
        E+ EY  Q+ DLR+HLNRKRSSSLR+G++P+ SH+NSNQQAESSYNPI P+ VITREEFD LKSKF+ +VEALKA CEKKES+FDDGDLG+ PFT
Subjt:  ENAEYIRQKSDLRDHLNRKRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDPLKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]3.7e-4073.13Show/hide
Query:  MVQAAGARSRSRDQVVQEDEHEQGDLYLDPVDEEYPRGDENAEYIRQKSDLRDHLNRKRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDP
        MVQ AGARSRS DQVV ED HEQGDL+ DPVDEE+  G           DLRDHLNRKR+SS R  RT    HKNSNQQAESSYNPI PEGVITREEF+ 
Subjt:  MVQAAGARSRSRDQVVQEDEHEQGDLYLDPVDEEYPRGDENAEYIRQKSDLRDHLNRKRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDP

Query:  LKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT
        LKSKF+ +VEALK RCEKKESAFDDGDLG+SPFT
Subjt:  LKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]1.8e-3159.7Show/hide
Query:  MVQAAGARSRSRDQVVQEDEHEQGDLYLDPVDEEYPRGDENAEYIRQKSDLRDHLNRKRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDP
        MVQA GA SRS D+  ++                            ++ DLRDHL+RKRSSSLR+GR+P+CSHKNSNQQAESSYNP+ PEGVITREEFD 
Subjt:  MVQAAGARSRSRDQVVQEDEHEQGDLYLDPVDEEYPRGDENAEYIRQKSDLRDHLNRKRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDP

Query:  LKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT
        LKSKF+ +VE LKARCE K S FDDGDLG+SPFT
Subjt:  LKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT

TrEMBL top hitse value%identityAlignment
A0A6J1DDS5 uncharacterized protein LOC1110198422.2e-1964.94Show/hide
Query:  KRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDPLKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT
        +R SSLR+G++P+ SH++SNQQAESS+NP  P GVITREEFD L+ K + +VEALKA+CE+KE + +DGDLG+SPFT
Subjt:  KRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDPLKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT

A0A6J1DDW5 uncharacterized protein LOC1110196345.3e-4571.64Show/hide
Query:  MVQAAGARSRSRDQVVQEDEHEQGDLYLDPVDEEYPRGDENAEYIRQKSDLRDHLNRKRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDP
        MVQAAGARSRS ++V + D HEQ   +L PV + +P G E+ EY  Q+ DLR+HLNRKRSSSLR+G++P+CSH+NSNQQAESSYNPI PEGVITREEFD 
Subjt:  MVQAAGARSRSRDQVVQEDEHEQGDLYLDPVDEEYPRGDENAEYIRQKSDLRDHLNRKRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDP

Query:  LKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT
        LKSKF+ +VEALKA+CEKKES+FDDGDLG+SPFT
Subjt:  LKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT

A0A6J1DM55 uncharacterized protein LOC1110222674.4e-3174.74Show/hide
Query:  ENAEYIRQKSDLRDHLNRKRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDPLKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT
        E+ EY  Q+ DLR+HLNRKRSSSLR+G++P+ SH+NSNQQAESSYNPI P+ VITREEFD LKSKF+ +VEALKA CEKKES+FDDGDLG+ PFT
Subjt:  ENAEYIRQKSDLRDHLNRKRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDPLKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT

A0A6J1DPN4 uncharacterized protein LOC1110230601.8e-4073.13Show/hide
Query:  MVQAAGARSRSRDQVVQEDEHEQGDLYLDPVDEEYPRGDENAEYIRQKSDLRDHLNRKRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDP
        MVQ AGARSRS DQVV ED HEQGDL+ DPVDEE+  G           DLRDHLNRKR+SS R  RT    HKNSNQQAESSYNPI PEGVITREEF+ 
Subjt:  MVQAAGARSRSRDQVVQEDEHEQGDLYLDPVDEEYPRGDENAEYIRQKSDLRDHLNRKRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDP

Query:  LKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT
        LKSKF+ +VEALK RCEKKESAFDDGDLG+SPFT
Subjt:  LKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT

A0A6J1DZJ1 uncharacterized protein LOC1110257388.8e-3259.7Show/hide
Query:  MVQAAGARSRSRDQVVQEDEHEQGDLYLDPVDEEYPRGDENAEYIRQKSDLRDHLNRKRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDP
        MVQA GA SRS D+  ++                            ++ DLRDHL+RKRSSSLR+GR+P+CSHKNSNQQAESSYNP+ PEGVITREEFD 
Subjt:  MVQAAGARSRSRDQVVQEDEHEQGDLYLDPVDEEYPRGDENAEYIRQKSDLRDHLNRKRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDP

Query:  LKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT
        LKSKF+ +VE LKARCE K S FDDGDLG+SPFT
Subjt:  LKSKFEVEVEALKARCEKKESAFDDGDLGKSPFT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCAAGCTGCTGGTGCCAGGTCTCGATCTCGAGACCAGGTGGTGCAGGAGGACGAACATGAACAGGGGGATCTTTACCTCGACCCAGTTGACGAGGAGTAC
CCCAGAGGCGATGAAAATGCGGAGTATATTCGCCAGAAGAGCGATCTCCGCGATCATCTTAATAGAAAGAGAAGCTCGTCCCTCCGAAGAGGACGAACTCCAGCA
TGCTCGCACAAGAACTCCAACCAGCAGGCCGAATCCTCTTACAACCCAATAGATCCCGAAGGAGTGATCACGAGGGAGGAGTTCGACCCGCTCAAGAGCAAATTT
GAAGTTGAAGTTGAAGCCTTGAAAGCAAGGTGCGAGAAGAAAGAGAGTGCATTTGATGATGGCGACTTGGGAAAATCGCCATTCACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCAAGCTGCTGGTGCCAGGTCTCGATCTCGAGACCAGGTGGTGCAGGAGGACGAACATGAACAGGGGGATCTTTACCTCGACCCAGTTGACGAGGAGTAC
CCCAGAGGCGATGAAAATGCGGAGTATATTCGCCAGAAGAGCGATCTCCGCGATCATCTTAATAGAAAGAGAAGCTCGTCCCTCCGAAGAGGACGAACTCCAGCA
TGCTCGCACAAGAACTCCAACCAGCAGGCCGAATCCTCTTACAACCCAATAGATCCCGAAGGAGTGATCACGAGGGAGGAGTTCGACCCGCTCAAGAGCAAATTT
GAAGTTGAAGTTGAAGCCTTGAAAGCAAGGTGCGAGAAGAAAGAGAGTGCATTTGATGATGGCGACTTGGGAAAATCGCCATTCACCTGA
Protein sequenceShow/hide protein sequence
MVQAAGARSRSRDQVVQEDEHEQGDLYLDPVDEEYPRGDENAEYIRQKSDLRDHLNRKRSSSLRRGRTPACSHKNSNQQAESSYNPIDPEGVITREEFDPLKSKF
EVEVEALKARCEKKESAFDDGDLGKSPFT