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Moc09g19310 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g19310
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr9:15024449..15027784
RNA-Seq ExpressionMoc09g19310
SyntenyMoc09g19310
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156328.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia]8.2e-2085.07Show/hide
Query:  NVLHASSPMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFSMVGHGDLTLS
        +++ A S MHSELE SEVELTVDDVSALL RLSVEPSLRQRIIVAQKEDPSLA+GFSMVGHGD TLS
Subjt:  NVLHASSPMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFSMVGHGDLTLS

XP_022156880.1 uncharacterized protein LOC111023714 [Momordica charantia]1.7e-1269.49Show/hide
Query:  PMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFSMVGHGDLTL
        P+  EL+RSEVEL V+DVSA+L RLSVEP+LRQR+I AQ+ DPSL++GFSMVG GD +L
Subjt:  PMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFSMVGHGDLTL

XP_022157022.1 uncharacterized protein LOC111023849 [Momordica charantia]4.4e-1388.24Show/hide
Query:  SPMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFS
        SPMHSELE  EVELTVDDVSA L RLS+EPSLRQRIIVAQKEDPSLA+GFS
Subjt:  SPMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFS

XP_022157823.1 uncharacterized protein LOC111024441 [Momordica charantia]5.3e-1962.5Show/hide
Query:  SPMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFSMVGHGDLTLSASVRKSGGTWRQRLLRGTAATVK---LGAAVRNPGSVRG
        SP+HSELER EVELT+DDV ALL RLSVEPSLRQRIIVAQKEDPSLA+GFSMVGHGD TLS    ++   +R RL      +++   LG A   P SV+ 
Subjt:  SPMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFSMVGHGDLTLSASVRKSGGTWRQRLLRGTAATVK---LGAAVRNPGSVRG

Query:  VRLR
         R R
Subjt:  VRLR

XP_022159308.1 uncharacterized protein LOC111025717 [Momordica charantia]7.7e-1051.95Show/hide
Query:  LALIPTVTPQNVLHASSPMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFSMVGHGDLTLS
        +++ P   P+       P+  EL+RSEVEL V DVSA+L RLSVE +LRQ++I A+K DPSL++GF +VG GD +LS
Subjt:  LALIPTVTPQNVLHASSPMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFSMVGHGDLTLS

TrEMBL top hitse value%identityAlignment
A0A6J1DQB9 Reverse transcriptase4.0e-2085.07Show/hide
Query:  NVLHASSPMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFSMVGHGDLTLS
        +++ A S MHSELE SEVELTVDDVSALL RLSVEPSLRQRIIVAQKEDPSLA+GFSMVGHGD TLS
Subjt:  NVLHASSPMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFSMVGHGDLTLS

A0A6J1DRK1 uncharacterized protein LOC1110237148.0e-1369.49Show/hide
Query:  PMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFSMVGHGDLTL
        P+  EL+RSEVEL V+DVSA+L RLSVEP+LRQR+I AQ+ DPSL++GFSMVG GD +L
Subjt:  PMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFSMVGHGDLTL

A0A6J1DTG8 Reverse transcriptase2.1e-1388.24Show/hide
Query:  SPMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFS
        SPMHSELE  EVELTVDDVSA L RLS+EPSLRQRIIVAQKEDPSLA+GFS
Subjt:  SPMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFS

A0A6J1DUE8 uncharacterized protein LOC1110244412.6e-1962.5Show/hide
Query:  SPMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFSMVGHGDLTLSASVRKSGGTWRQRLLRGTAATVK---LGAAVRNPGSVRG
        SP+HSELER EVELT+DDV ALL RLSVEPSLRQRIIVAQKEDPSLA+GFSMVGHGD TLS    ++   +R RL      +++   LG A   P SV+ 
Subjt:  SPMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFSMVGHGDLTLSASVRKSGGTWRQRLLRGTAATVK---LGAAVRNPGSVRG

Query:  VRLR
         R R
Subjt:  VRLR

A0A6J1DYG1 uncharacterized protein LOC1110257173.7e-1051.95Show/hide
Query:  LALIPTVTPQNVLHASSPMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFSMVGHGDLTLS
        +++ P   P+       P+  EL+RSEVEL V DVSA+L RLSVE +LRQ++I A+K DPSL++GF +VG GD +LS
Subjt:  LALIPTVTPQNVLHASSPMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFSMVGHGDLTLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACCCCTCCTCTCGGGCGTCACATGCCCACCAGCTTCCACCTTGGTTCGTCCCCGAACCACATCTTGCTCTGATACCAACTGTAACGCCCCAGAACGTTCTACACGC
TTCTAGTCCAATGCACAGCGAGTTGGAACGATCGGAGGTGGAGCTGACAGTGGATGATGTTTCAGCGTTGTTGGTCCGACTCTCAGTGGAACCTAGCCTGAGACAGAGGA
TCATTGTTGCTCAAAAGGAAGATCCTAGTTTGGCCGAAGGCTTTAGTATGGTGGGCCACGGTGATCTCACTCTTTCAGCTTCTGTTCGTAAGAGCGGCGGCACATGGCGG
CAGCGTCTCCTCCGCGGAACAGCAGCGACGGTGAAGCTCGGTGCAGCGGTGCGAAACCCAGGCAGTGTTCGCGGCGTTCGGCTTCGACGAATTTCGAGTATTACCGGCGG
TTTATTCGATTCCGGCTGCATGAAGCGCGTCTCTAGTGGCCGGCCAGCAGCAGGAAACTTTGGTGGTGGCTATTGTTCGAGTCTGGGCGCGATTTTCTTGTCGAAAGTAG
CGTTCGGGCACTTTTGGCATCAACCCACATCTAATCTAACCCGTTATGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACCCCTCCTCTCGGGCGTCACATGCCCACCAGCTTCCACCTTGGTTCGTCCCCGAACCACATCTTGCTCTGATACCAACTGTAACGCCCCAGAACGTTCTACACGC
TTCTAGTCCAATGCACAGCGAGTTGGAACGATCGGAGGTGGAGCTGACAGTGGATGATGTTTCAGCGTTGTTGGTCCGACTCTCAGTGGAACCTAGCCTGAGACAGAGGA
TCATTGTTGCTCAAAAGGAAGATCCTAGTTTGGCCGAAGGCTTTAGTATGGTGGGCCACGGTGATCTCACTCTTTCAGCTTCTGTTCGTAAGAGCGGCGGCACATGGCGG
CAGCGTCTCCTCCGCGGAACAGCAGCGACGGTGAAGCTCGGTGCAGCGGTGCGAAACCCAGGCAGTGTTCGCGGCGTTCGGCTTCGACGAATTTCGAGTATTACCGGCGG
TTTATTCGATTCCGGCTGCATGAAGCGCGTCTCTAGTGGCCGGCCAGCAGCAGGAAACTTTGGTGGTGGCTATTGTTCGAGTCTGGGCGCGATTTTCTTGTCGAAAGTAG
CGTTCGGGCACTTTTGGCATCAACCCACATCTAATCTAACCCGTTATGCGTAA
Protein sequenceShow/hide protein sequence
MYPSSRASHAHQLPPWFVPEPHLALIPTVTPQNVLHASSPMHSELERSEVELTVDDVSALLVRLSVEPSLRQRIIVAQKEDPSLAEGFSMVGHGDLTLSASVRKSGGTWR
QRLLRGTAATVKLGAAVRNPGSVRGVRLRRISSITGGLFDSGCMKRVSSGRPAAGNFGGGYCSSLGAIFLSKVAFGHFWHQPTSNLTRYA