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Moc09g19410 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g19410
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111019515
Genome locationchr9:15078408..15079705
RNA-Seq ExpressionMoc09g19410
SyntenyMoc09g19410
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151603.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111019515 [Momordica charantia]2.8e-10790Show/hide
Query:  MATLPGVRDAHTIPSNAVNPLGCDTGRSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKKRSKRRAVQTKKPTVPMNEPKTRAGKAKADEAKKKVVAP
        MATLPGVRDAH IPSNAVNPL C TGR KVGENSTQE   EEDPEDTQTIREMFQYKRRE K SKRRAVQ  KPTVPMNEPKTRA KAKA EAKKKVVAP
Subjt:  MATLPGVRDAHTIPSNAVNPLGCDTGRSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKKRSKRRAVQTKKPTVPMNEPKTRAGKAKADEAKKKVVAP

Query:  GPVDTIELDLSEGEEVETKWNAANLATRTSLMKSRKIMTELGFDLNLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIR
        GPVD IELDLSEGE+VET WNAANLATRTSLMK  KIMTELGFDL LGDVPDDWR+TAR KEWRPLIQPIQCEALELVREFYAA HPQSHIAIVRGKEIR
Subjt:  GPVDTIELDLSEGEEVETKWNAANLATRTSLMKSRKIMTELGFDLNLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIR

Query:  FDATQINYTFNIKNIRDAVGNKMLVTPTLE
        FDATQINYTFNIKNI+DAVGNKMLVTPTLE
Subjt:  FDATQINYTFNIKNIRDAVGNKMLVTPTLE

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]1.7e-2428.08Show/hide
Query:  RSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKKRSKRRAVQTKKPTVPMNEPKTRAGKAKADEAKKKVVAPGPVDTIELDLSEGEEVETKWNAANLA
        + + G +   +  SE   E + +  +    + R +    R A Q +    P  + KT   +  A+E  ++     P  T        E+  ++     L 
Subjt:  RSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKKRSKRRAVQTKKPTVPMNEPKTRAGKAKADEAKKKVVAPGPVDTIELDLSEGEEVETKWNAANLA

Query:  TRTSLMKSRKIMTELGFDLNLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIKNIRDAVGNKMLVT
         R     +R I+ E GFD     VP+  R+   +  W  L  PI   +  LV+EFY A++P       RG E+R                   GN++LV 
Subjt:  TRTSLMKSRKIMTELGFDLNLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIKNIRDAVGNKMLVT

Query:  PTLEQLDEALECVGKPSATWDLTTHGKVRLKPEDVSLAAAGWLYIVKNRILPTERDEHVTQDRALLVYAMLKGIDVNYGEFINTSMHECAHR
        P+ EQ++EA   + +P  TW ++T GK+ LKP D++  A  W+Y+VKNR++PT  D  + ++RA++VY ++KG++ N+GE I   +  C+ +
Subjt:  PTLEQLDEALECVGKPSATWDLTTHGKVRLKPEDVSLAAAGWLYIVKNRILPTERDEHVTQDRALLVYAMLKGIDVNYGEFINTSMHECAHR

XP_022158357.1 uncharacterized protein LOC111024860 [Momordica charantia]3.2e-2396.77Show/hide
Query:  MATLPGVRDAHTIPSNAVNPLGCDTGRSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKK
        MATLPGVRDAHTIPSN VNPLGCDTGRSKVGENSTQEPTSEEDPEDTQTIR+MFQYKRREKK
Subjt:  MATLPGVRDAHTIPSNAVNPLGCDTGRSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKK

XP_022158852.1 uncharacterized protein LOC111025316 [Momordica charantia]1.6e-2597.1Show/hide
Query:  MATLPGVRDAHTIPSNAVNPLGCDTGRSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKKRSKRRAV
        MATLPGVRDAHTIPSNAVNPLGCDTGRSKVGENSTQEPTSEED EDTQTIREMFQYKRREKK SKRRAV
Subjt:  MATLPGVRDAHTIPSNAVNPLGCDTGRSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKKRSKRRAV

XP_022158884.1 uncharacterized protein LOC111025345 [Momordica charantia]2.0e-2885.71Show/hide
Query:  MATLPGVRDAHTIPSNAVNPLGCDTGRSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKKRSKRRAVQTKKPTVPMNEPKTR
        MATLPGVRDAH IPSNAVN LGCDTGR KVGENSTQEPT ++DPEDTQT+REMFQYKRREKK SK RAVQTKKPTVPMN   TR
Subjt:  MATLPGVRDAHTIPSNAVNPLGCDTGRSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKKRSKRRAVQTKKPTVPMNEPKTR

TrEMBL top hitse value%identityAlignment
A0A6J1DCL7 LOW QUALITY PROTEIN: uncharacterized protein LOC1110195151.3e-10790Show/hide
Query:  MATLPGVRDAHTIPSNAVNPLGCDTGRSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKKRSKRRAVQTKKPTVPMNEPKTRAGKAKADEAKKKVVAP
        MATLPGVRDAH IPSNAVNPL C TGR KVGENSTQE   EEDPEDTQTIREMFQYKRRE K SKRRAVQ  KPTVPMNEPKTRA KAKA EAKKKVVAP
Subjt:  MATLPGVRDAHTIPSNAVNPLGCDTGRSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKKRSKRRAVQTKKPTVPMNEPKTRAGKAKADEAKKKVVAP

Query:  GPVDTIELDLSEGEEVETKWNAANLATRTSLMKSRKIMTELGFDLNLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIR
        GPVD IELDLSEGE+VET WNAANLATRTSLMK  KIMTELGFDL LGDVPDDWR+TAR KEWRPLIQPIQCEALELVREFYAA HPQSHIAIVRGKEIR
Subjt:  GPVDTIELDLSEGEEVETKWNAANLATRTSLMKSRKIMTELGFDLNLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIR

Query:  FDATQINYTFNIKNIRDAVGNKMLVTPTLE
        FDATQINYTFNIKNI+DAVGNKMLVTPTLE
Subjt:  FDATQINYTFNIKNIRDAVGNKMLVTPTLE

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220078.3e-2528.08Show/hide
Query:  RSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKKRSKRRAVQTKKPTVPMNEPKTRAGKAKADEAKKKVVAPGPVDTIELDLSEGEEVETKWNAANLA
        + + G +   +  SE   E + +  +    + R +    R A Q +    P  + KT   +  A+E  ++     P  T        E+  ++     L 
Subjt:  RSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKKRSKRRAVQTKKPTVPMNEPKTRAGKAKADEAKKKVVAPGPVDTIELDLSEGEEVETKWNAANLA

Query:  TRTSLMKSRKIMTELGFDLNLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIKNIRDAVGNKMLVT
         R     +R I+ E GFD     VP+  R+   +  W  L  PI   +  LV+EFY A++P       RG E+R                   GN++LV 
Subjt:  TRTSLMKSRKIMTELGFDLNLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIKNIRDAVGNKMLVT

Query:  PTLEQLDEALECVGKPSATWDLTTHGKVRLKPEDVSLAAAGWLYIVKNRILPTERDEHVTQDRALLVYAMLKGIDVNYGEFINTSMHECAHR
        P+ EQ++EA   + +P  TW ++T GK+ LKP D++  A  W+Y+VKNR++PT  D  + ++RA++VY ++KG++ N+GE I   +  C+ +
Subjt:  PTLEQLDEALECVGKPSATWDLTTHGKVRLKPEDVSLAAAGWLYIVKNRILPTERDEHVTQDRALLVYAMLKGIDVNYGEFINTSMHECAHR

A0A6J1DX11 uncharacterized protein LOC1110248601.6e-2396.77Show/hide
Query:  MATLPGVRDAHTIPSNAVNPLGCDTGRSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKK
        MATLPGVRDAHTIPSN VNPLGCDTGRSKVGENSTQEPTSEEDPEDTQTIR+MFQYKRREKK
Subjt:  MATLPGVRDAHTIPSNAVNPLGCDTGRSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKK

A0A6J1DY94 uncharacterized protein LOC1110253167.5e-2697.1Show/hide
Query:  MATLPGVRDAHTIPSNAVNPLGCDTGRSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKKRSKRRAV
        MATLPGVRDAHTIPSNAVNPLGCDTGRSKVGENSTQEPTSEED EDTQTIREMFQYKRREKK SKRRAV
Subjt:  MATLPGVRDAHTIPSNAVNPLGCDTGRSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKKRSKRRAV

A0A6J1E0Q9 uncharacterized protein LOC1110253459.5e-2985.71Show/hide
Query:  MATLPGVRDAHTIPSNAVNPLGCDTGRSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKKRSKRRAVQTKKPTVPMNEPKTR
        MATLPGVRDAH IPSNAVN LGCDTGR KVGENSTQEPT ++DPEDTQT+REMFQYKRREKK SK RAVQTKKPTVPMN   TR
Subjt:  MATLPGVRDAHTIPSNAVNPLGCDTGRSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKKRSKRRAVQTKKPTVPMNEPKTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTCTACCAGGGGTAAGGGATGCTCACACTATTCCTTCTAATGCAGTTAACCCGCTTGGGTGTGATACAGGTAGATCCAAGGTTGGGGAGAATAGTACT
CAAGAACCTACCAGCGAAGAAGATCCTGAGGACACGCAGACGATAAGGGAAATGTTCCAATACAAGAGGCGGGAGAAAAAGCGTTCAAAACGTCGTGCAGTTCAG
ACTAAGAAGCCGACAGTGCCCATGAATGAACCTAAAACGAGAGCTGGGAAAGCTAAAGCAGATGAAGCTAAGAAGAAGGTAGTGGCACCTGGGCCAGTTGATACA
ATTGAACTGGACTTGTCTGAGGGAGAGGAGGTCGAGACGAAATGGAACGCGGCAAATTTAGCCACTCGAACTTCATTAATGAAATCCCGTAAGATTATGACAGAA
TTGGGATTCGACCTCAATCTAGGAGATGTGCCTGATGATTGGAGGGAGACCGCTAGAGACAAAGAGTGGAGACCACTCATTCAGCCCATACAATGTGAGGCTCTG
GAGTTAGTCAGAGAGTTCTATGCTGCTGTCCATCCCCAATCCCATATAGCCATAGTGCGTGGGAAGGAAATAAGGTTTGATGCCACTCAGATCAACTACACCTTC
AACATTAAGAATATCAGAGATGCTGTGGGCAATAAGATGTTAGTGACTCCGACTCTAGAACAGCTTGATGAGGCTCTAGAATGTGTTGGGAAGCCCTCTGCCACT
TGGGATTTGACTACTCATGGCAAGGTACGACTAAAACCCGAGGATGTTTCACTAGCTGCTGCAGGATGGTTATACATAGTCAAAAACAGAATTCTGCCAACGGAA
CGTGATGAGCATGTCACTCAGGATAGGGCACTGCTGGTTTATGCCATGCTAAAGGGCATAGATGTGAATTATGGAGAATTTATCAATACCAGTATGCATGAGTGT
GCCCACCGGACACGTGAGAGATGCCCCAATTGTGGAAGAGAAGAATATTCGGAGAATTATCGCCCATACGCTACAAAGAAGGGAAGGTACTGGGATGTCTCCTAC
ATCGGAGATCCGTCGTCTTCGAGAGGAGAACCAGCAGCTGCGAGATCAAGTTTGAGAAGTCGTGCAACATATCTACAACTTGAGGGCTTCATTGGATTTTGCGGT
TTTACCTTCATAGCCTCCAGCGCTAGCTGCTATCCTTGGTCATCCATCTTCCAGTACCGATACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTCTACCAGGGGTAAGGGATGCTCACACTATTCCTTCTAATGCAGTTAACCCGCTTGGGTGTGATACAGGTAGATCCAAGGTTGGGGAGAATAGTACT
CAAGAACCTACCAGCGAAGAAGATCCTGAGGACACGCAGACGATAAGGGAAATGTTCCAATACAAGAGGCGGGAGAAAAAGCGTTCAAAACGTCGTGCAGTTCAG
ACTAAGAAGCCGACAGTGCCCATGAATGAACCTAAAACGAGAGCTGGGAAAGCTAAAGCAGATGAAGCTAAGAAGAAGGTAGTGGCACCTGGGCCAGTTGATACA
ATTGAACTGGACTTGTCTGAGGGAGAGGAGGTCGAGACGAAATGGAACGCGGCAAATTTAGCCACTCGAACTTCATTAATGAAATCCCGTAAGATTATGACAGAA
TTGGGATTCGACCTCAATCTAGGAGATGTGCCTGATGATTGGAGGGAGACCGCTAGAGACAAAGAGTGGAGACCACTCATTCAGCCCATACAATGTGAGGCTCTG
GAGTTAGTCAGAGAGTTCTATGCTGCTGTCCATCCCCAATCCCATATAGCCATAGTGCGTGGGAAGGAAATAAGGTTTGATGCCACTCAGATCAACTACACCTTC
AACATTAAGAATATCAGAGATGCTGTGGGCAATAAGATGTTAGTGACTCCGACTCTAGAACAGCTTGATGAGGCTCTAGAATGTGTTGGGAAGCCCTCTGCCACT
TGGGATTTGACTACTCATGGCAAGGTACGACTAAAACCCGAGGATGTTTCACTAGCTGCTGCAGGATGGTTATACATAGTCAAAAACAGAATTCTGCCAACGGAA
CGTGATGAGCATGTCACTCAGGATAGGGCACTGCTGGTTTATGCCATGCTAAAGGGCATAGATGTGAATTATGGAGAATTTATCAATACCAGTATGCATGAGTGT
GCCCACCGGACACGTGAGAGATGCCCCAATTGTGGAAGAGAAGAATATTCGGAGAATTATCGCCCATACGCTACAAAGAAGGGAAGGTACTGGGATGTCTCCTAC
ATCGGAGATCCGTCGTCTTCGAGAGGAGAACCAGCAGCTGCGAGATCAAGTTTGAGAAGTCGTGCAACATATCTACAACTTGAGGGCTTCATTGGATTTTGCGGT
TTTACCTTCATAGCCTCCAGCGCTAGCTGCTATCCTTGGTCATCCATCTTCCAGTACCGATACTGA
Protein sequenceShow/hide protein sequence
MATLPGVRDAHTIPSNAVNPLGCDTGRSKVGENSTQEPTSEEDPEDTQTIREMFQYKRREKKRSKRRAVQTKKPTVPMNEPKTRAGKAKADEAKKKVVAPGPVDT
IELDLSEGEEVETKWNAANLATRTSLMKSRKIMTELGFDLNLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTF
NIKNIRDAVGNKMLVTPTLEQLDEALECVGKPSATWDLTTHGKVRLKPEDVSLAAAGWLYIVKNRILPTERDEHVTQDRALLVYAMLKGIDVNYGEFINTSMHEC
AHRTRERCPNCGREEYSENYRPYATKKGRYWDVSYIGDPSSSRGEPAAARSSLRSRATYLQLEGFIGFCGFTFIASSASCYPWSSIFQYRY