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Moc09g19500 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g19500
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationchr9:15113661..15114575
RNA-Seq ExpressionMoc09g19500
SyntenyMoc09g19500
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PIN01433.1 hypothetical protein CDL12_26059 [Handroanthus impetiginosus]3.0e-2136.32Show/hide
Query:  TARDKEWRPLIQPIQCEALELVREFYA-AVHPQSHIAIVRGKEIRFDATQINYTFNIENIR-DAVGNKMLVTPTLAQLDETLACVGKPSATWDLTTHGKV
        T R+++W+  I   +   L LVREFYA A   ++   +VRG+E+ FD+  IN  +NI  I  DA  N         +L  TL   G   A W +T    V
Subjt:  TARDKEWRPLIQPIQCEALELVREFYA-AVHPQSHIAIVRGKEIRFDATQINYTFNIENIR-DAVGNKMLVTPTLAQLDETLACVGKPSATWDLTTHGKV

Query:  RLKPEDVSLAAARWLYIVKDRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRGKFYHPRLVTSLCLRQGVQLPEDQ
          K   +  AA  WL+ +  R+LPT H   VT DRALL+Y ++ G   + G++I+ SI + A+ +R   + P L+T LC R GV+  E +
Subjt:  RLKPEDVSLAAARWLYIVKDRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRGKFYHPRLVTSLCLRQGVQLPEDQ

PIN07564.1 hypothetical protein CDL12_19862 [Handroanthus impetiginosus]3.1e-1833.16Show/hide
Query:  TARDKEWRPLIQPIQCEALELVREFYA-AVHPQSHIAIVRGKEIRFDATQINYTFNIENIR-DAVGNKMLVTPTLAQLDETLACVGKPSATWDLTTHGKV
        T  +++W+  I   +   L L REFYA A   ++   +VRG+E+ FD   IN  +NI  I  D   N         +L  TL   G   A W +T    +
Subjt:  TARDKEWRPLIQPIQCEALELVREFYA-AVHPQSHIAIVRGKEIRFDATQINYTFNIENIR-DAVGNKMLVTPTLAQLDETLACVGKPSATWDLTTHGKV

Query:  RLKPEDVSLAAARWLYIVKDRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRGKFYHPRLVTSLCLRQGVQLPEDQ
          K   +  AA  WL+ +  ++LPT H   VT D+ALL+Y ++ G   + G++I+ SI + A+ +R   + P L+T LC R GV+  E +
Subjt:  RLKPEDVSLAAARWLYIVKDRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRGKFYHPRLVTSLCLRQGVQLPEDQ

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]3.1e-1830.58Show/hide
Query:  MTELGFDLNLGDV---PGDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHI-AIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVTPTLAQLD
        M E GFDL   D+   P   R+     +W            ELVREFYA++  Q     IVR K++   +  IN  FN+ ++ +     M+       L 
Subjt:  MTELGFDLNLGDV---PGDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHI-AIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVTPTLAQLD

Query:  ETLACVGKPSATWDLTTHGKVRLKPEDVSLAAARWLYIVKDRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRGKFYHPRLVTSLC
        + L  V    + W +  +G    + E +   A  W Y V+   +P  H   ++ +R LL+YA+L    +N G++I   IH CA +  G  Y P L+TSLC
Subjt:  ETLACVGKPSATWDLTTHGKVRLKPEDVSLAAARWLYIVKDRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRGKFYHPRLVTSLC

Query:  LRQGVQ
        L+  V+
Subjt:  LRQGVQ

XP_022151603.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111019515 [Momordica charantia]5.7e-4192.39Show/hide
Query:  MTELGFDLNLGDVPGDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVTPTL
        MTELGFDL LGDVP DWR+TAR KEWRPLIQPIQCEALELVREFYAA HPQSHIAIVRGKEIRFDATQINYTFNI+NI+DAVGNKMLVTPTL
Subjt:  MTELGFDLNLGDVPGDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVTPTL

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]8.3e-2429.24Show/hide
Query:  MTELGFDLNLGDVPGDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVTPTLAQLDETLA
        + E GFD     VP   R+   +  W  L  PI   +  LV+EFY A++P       RG E+R                   GN++LV P+  Q++E   
Subjt:  MTELGFDLNLGDVPGDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVTPTLAQLDETLA

Query:  CVGKPSATWDLTTHGKVRLKPEDVSLAAARWLYIVKDRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRGKFYHPRLVTSLCLRQG
         + +P  TW ++T GK+ LKP D++  A  W+Y+VK+R++PT +D  + ++RA++VY ++KG++ N+GELI   I  C+ +                  G
Subjt:  CVGKPSATWDLTTHGKVRLKPEDVSLAAARWLYIVKDRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRGKFYHPRLVTSLCLRQG

Query:  VQLPEDQVKRDAPIVEEKNIRRIIAHALQRREG---TGMSPTSEIRRLREENQQLRDQVREVVQHIYNLRASLDFA------VLPSWPPALAAILGHPSS
        V+  +  V    P    +++R++  +++ R E    T   P +     RE+  +LR +   +   +   RA+  F         PS+P  LAA L  PSS
Subjt:  VQLPEDQVKRDAPIVEEKNIRRIIAHALQRREG---TGMSPTSEIRRLREENQQLRDQVREVVQHIYNLRASLDFA------VLPSWPPALAAILGHPSS

Query:  S
        S
Subjt:  S

TrEMBL top hitse value%identityAlignment
A0A2G9G807 Uncharacterized protein1.4e-2136.32Show/hide
Query:  TARDKEWRPLIQPIQCEALELVREFYA-AVHPQSHIAIVRGKEIRFDATQINYTFNIENIR-DAVGNKMLVTPTLAQLDETLACVGKPSATWDLTTHGKV
        T R+++W+  I   +   L LVREFYA A   ++   +VRG+E+ FD+  IN  +NI  I  DA  N         +L  TL   G   A W +T    V
Subjt:  TARDKEWRPLIQPIQCEALELVREFYA-AVHPQSHIAIVRGKEIRFDATQINYTFNIENIR-DAVGNKMLVTPTLAQLDETLACVGKPSATWDLTTHGKV

Query:  RLKPEDVSLAAARWLYIVKDRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRGKFYHPRLVTSLCLRQGVQLPEDQ
          K   +  AA  WL+ +  R+LPT H   VT DRALL+Y ++ G   + G++I+ SI + A+ +R   + P L+T LC R GV+  E +
Subjt:  RLKPEDVSLAAARWLYIVKDRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRGKFYHPRLVTSLCLRQGVQLPEDQ

A0A2G9GQI5 Uncharacterized protein1.5e-1833.16Show/hide
Query:  TARDKEWRPLIQPIQCEALELVREFYA-AVHPQSHIAIVRGKEIRFDATQINYTFNIENIR-DAVGNKMLVTPTLAQLDETLACVGKPSATWDLTTHGKV
        T  +++W+  I   +   L L REFYA A   ++   +VRG+E+ FD   IN  +NI  I  D   N         +L  TL   G   A W +T    +
Subjt:  TARDKEWRPLIQPIQCEALELVREFYA-AVHPQSHIAIVRGKEIRFDATQINYTFNIENIR-DAVGNKMLVTPTLAQLDETLACVGKPSATWDLTTHGKV

Query:  RLKPEDVSLAAARWLYIVKDRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRGKFYHPRLVTSLCLRQGVQLPEDQ
          K   +  AA  WL+ +  ++LPT H   VT D+ALL+Y ++ G   + G++I+ SI + A+ +R   + P L+T LC R GV+  E +
Subjt:  RLKPEDVSLAAARWLYIVKDRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRGKFYHPRLVTSLCLRQGVQLPEDQ

A0A5D2MA47 Uncharacterized protein1.5e-1830.58Show/hide
Query:  MTELGFDLNLGDV---PGDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHI-AIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVTPTLAQLD
        M E GFDL   D+   P   R+     +W            ELVREFYA++  Q     IVR K++   +  IN  FN+ ++ +     M+       L 
Subjt:  MTELGFDLNLGDV---PGDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHI-AIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVTPTLAQLD

Query:  ETLACVGKPSATWDLTTHGKVRLKPEDVSLAAARWLYIVKDRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRGKFYHPRLVTSLC
        + L  V    + W +  +G    + E +   A  W Y V+   +P  H   ++ +R LL+YA+L    +N G++I   IH CA +  G  Y P L+TSLC
Subjt:  ETLACVGKPSATWDLTTHGKVRLKPEDVSLAAARWLYIVKDRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRGKFYHPRLVTSLC

Query:  LRQGVQ
        L+  V+
Subjt:  LRQGVQ

A0A6J1DCL7 LOW QUALITY PROTEIN: uncharacterized protein LOC1110195152.8e-4192.39Show/hide
Query:  MTELGFDLNLGDVPGDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVTPTL
        MTELGFDL LGDVP DWR+TAR KEWRPLIQPIQCEALELVREFYAA HPQSHIAIVRGKEIRFDATQINYTFNI+NI+DAVGNKMLVTPTL
Subjt:  MTELGFDLNLGDVPGDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVTPTL

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220074.0e-2429.24Show/hide
Query:  MTELGFDLNLGDVPGDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVTPTLAQLDETLA
        + E GFD     VP   R+   +  W  L  PI   +  LV+EFY A++P       RG E+R                   GN++LV P+  Q++E   
Subjt:  MTELGFDLNLGDVPGDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVTPTLAQLDETLA

Query:  CVGKPSATWDLTTHGKVRLKPEDVSLAAARWLYIVKDRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRGKFYHPRLVTSLCLRQG
         + +P  TW ++T GK+ LKP D++  A  W+Y+VK+R++PT +D  + ++RA++VY ++KG++ N+GELI   I  C+ +                  G
Subjt:  CVGKPSATWDLTTHGKVRLKPEDVSLAAARWLYIVKDRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRGKFYHPRLVTSLCLRQG

Query:  VQLPEDQVKRDAPIVEEKNIRRIIAHALQRREG---TGMSPTSEIRRLREENQQLRDQVREVVQHIYNLRASLDFA------VLPSWPPALAAILGHPSS
        V+  +  V    P    +++R++  +++ R E    T   P +     RE+  +LR +   +   +   RA+  F         PS+P  LAA L  PSS
Subjt:  VQLPEDQVKRDAPIVEEKNIRRIIAHALQRREG---TGMSPTSEIRRLREENQQLRDQVREVVQHIYNLRASLDFA------VLPSWPPALAAILGHPSS

Query:  S
        S
Subjt:  S

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGAATTGGGATTCGACCTCAATCTAGGAGATGTGCCTGGTGATTGGAGGGAGACCGCTAGAGACAAAGAGTGGAGACCACTCATTCAGCCCATACAATGT
GAGGCTTTGGAGTTAGTTAGAGAGTTCTATGCTGCTGTCCATCCCCAGTCACATATAGCCATAGTGCGCGGGAAGGAAATACGGTTTGATGCCACTCAGATCAAC
TACACCTTCAACATTGAGAATATCAGAGATGCTGTGGGCAATAAGATGTTAGTGACTCCGACTCTAGCACAGCTTGATGAGACTCTAGCATGTGTTGGGAAGCCC
TCTGCCACTTGGGATTTGACTACTCATGGCAAGGTACGACTAAAACCCGAGGATGTTTCCCTAGCTGCTGCACGATGGTTATACATAGTCAAAGACAGAATTCTG
CCAACGGAGCATGATGAGCATGTCACTCAGGATAGGGCACTGCTGGTTTATGCCATGCTAAAGGGCATAGATGTGAATTATGGAGAATTGATCAATACCAGTATC
CATGAGTGTGCCCACCGAACACGTGGTAAGTTTTATCACCCACGATTGGTCACTTCTTTATGCTTGCGACAAGGTGTACAGCTCCCTGAGGATCAAGTTAAGAGA
GATGCCCCAATTGTGGAAGAGAAGAATATTCGGCGTATTATCGCCCATGCGTTACAAAGAAGGGAAGGTACTGGGATGTCTCCTACATCGGAGATCCGTCGTCTT
CGAGAGGAGAACCAACAGCTGCGAGATCAGGTTCGAGAAGTCGTGCAACATATCTACAACTTGAGGGCTTCATTGGATTTTGCGGTTTTACCTTCATGGCCTCCA
GCTCTAGCTGCTATCCTTGGTCATCCATCTTCCAGTACTGACACTGATCCTAGTCCACAACCTCTGACTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGAATTGGGATTCGACCTCAATCTAGGAGATGTGCCTGGTGATTGGAGGGAGACCGCTAGAGACAAAGAGTGGAGACCACTCATTCAGCCCATACAATGT
GAGGCTTTGGAGTTAGTTAGAGAGTTCTATGCTGCTGTCCATCCCCAGTCACATATAGCCATAGTGCGCGGGAAGGAAATACGGTTTGATGCCACTCAGATCAAC
TACACCTTCAACATTGAGAATATCAGAGATGCTGTGGGCAATAAGATGTTAGTGACTCCGACTCTAGCACAGCTTGATGAGACTCTAGCATGTGTTGGGAAGCCC
TCTGCCACTTGGGATTTGACTACTCATGGCAAGGTACGACTAAAACCCGAGGATGTTTCCCTAGCTGCTGCACGATGGTTATACATAGTCAAAGACAGAATTCTG
CCAACGGAGCATGATGAGCATGTCACTCAGGATAGGGCACTGCTGGTTTATGCCATGCTAAAGGGCATAGATGTGAATTATGGAGAATTGATCAATACCAGTATC
CATGAGTGTGCCCACCGAACACGTGGTAAGTTTTATCACCCACGATTGGTCACTTCTTTATGCTTGCGACAAGGTGTACAGCTCCCTGAGGATCAAGTTAAGAGA
GATGCCCCAATTGTGGAAGAGAAGAATATTCGGCGTATTATCGCCCATGCGTTACAAAGAAGGGAAGGTACTGGGATGTCTCCTACATCGGAGATCCGTCGTCTT
CGAGAGGAGAACCAACAGCTGCGAGATCAGGTTCGAGAAGTCGTGCAACATATCTACAACTTGAGGGCTTCATTGGATTTTGCGGTTTTACCTTCATGGCCTCCA
GCTCTAGCTGCTATCCTTGGTCATCCATCTTCCAGTACTGACACTGATCCTAGTCCACAACCTCTGACTTCATGA
Protein sequenceShow/hide protein sequence
MTELGFDLNLGDVPGDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIENIRDAVGNKMLVTPTLAQLDETLACVGKP
SATWDLTTHGKVRLKPEDVSLAAARWLYIVKDRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTRGKFYHPRLVTSLCLRQGVQLPEDQVKR
DAPIVEEKNIRRIIAHALQRREGTGMSPTSEIRRLREENQQLRDQVREVVQHIYNLRASLDFAVLPSWPPALAAILGHPSSSTDTDPSPQPLTS