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Moc09g19530 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g19530
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr9:15128731..15129096
RNA-Seq ExpressionMoc09g19530
SyntenyMoc09g19530
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025994.1 retrotransposon protein putative ty3-gypsy sub-class [Cucumis melo var. makuwa]3.0e-0569.7Show/hide
Query:  LPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
        LPT+Y+YHFGD+TEWG GN  ++DGIHS P LG
Subjt:  LPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
KAA0046251.1 uncharacterized protein E6C27_scaffold284G00510 [Cucumis melo var. makuwa]3.9e-0567.65Show/hide
Query:  ELPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
        +LPT+Y+YHFGD+T WG GNI ++DGIHS P LG
Subjt:  ELPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]3.9e-0572.73Show/hide
Query:  LPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
        LPT+YSYHFGD TEW  GNI ++DGIHS P LG
Subjt:  LPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
KAA0065950.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]7.8e-0672.73Show/hide
Query:  LPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
        LPT+Y+YHFGD+TEWG GNI ++DGIHS P LG
Subjt:  LPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
TYK19425.1 gag/pol protein [Cucumis melo var. makuwa]7.8e-0672.73Show/hide
Query:  LPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
        LPT+Y+YHFGD+TEWG GNIT++DGIH  P LG
Subjt:  LPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
TrEMBL top hitse value%identityAlignment
A0A5A7SJY0 Retrotransposon protein putative ty3-gypsy sub-class1.4e-0569.7Show/hide
Query:  LPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
        LPT+Y+YHFGD+TEWG GN  ++DGIHS P LG
Subjt:  LPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
A0A5A7TY17 Uncharacterized protein1.9e-0567.65Show/hide
Query:  ELPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
        +LPT+Y+YHFGD+T WG GNI ++DGIHS P LG
Subjt:  ELPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
A0A5A7UYE8 Gag/pol protein1.9e-0572.73Show/hide
Query:  LPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
        LPT+YSYHFGD TEW  GNI ++DGIHS P LG
Subjt:  LPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
A0A5A7VFG5 Ty1-copia retrotransposon protein3.8e-0672.73Show/hide
Query:  LPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
        LPT+Y+YHFGD+TEWG GNI ++DGIHS P LG
Subjt:  LPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
A0A5D3D7C0 Gag/pol protein3.8e-0672.73Show/hide
Query:  LPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
        LPT+Y+YHFGD+TEWG GNIT++DGIH  P LG
Subjt:  LPTEYSYHFGDETEWGTGNITSEDGIHSSPTLG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACGGCCCACTCTGTAAAGGTTACAGACGACTCGATCCAGGCCGTTCGTGTGGATACATGTGACTGGGGTGAGTTATGGACTCTTGCCCGTGAGGGCTCG
TCCTTTGATCAGTATGGGTGCAAGTGGCCCGAGTTGCCGACTGAATATTCCTACCATTTTGGGGACGAGACCGAGTGGGGAACTGGGAACATAACTTCAGAAGAT
GGAATTCACTCCTCCCCGACTTTAGGGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATACGGCCCACTCTGTAAAGGTTACAGACGACTCGATCCAGGCCGTTCGTGTGGATACATGTGACTGGGGTGAGTTATGGACTCTTGCCCGTGAGGGCTCG
TCCTTTGATCAGTATGGGTGCAAGTGGCCCGAGTTGCCGACTGAATATTCCTACCATTTTGGGGACGAGACCGAGTGGGGAACTGGGAACATAACTTCAGAAGAT
GGAATTCACTCCTCCCCGACTTTAGGGGAGTAG
Protein sequenceShow/hide protein sequence
MDTAHSVKVTDDSIQAVRVDTCDWGELWTLAREGSSFDQYGCKWPELPTEYSYHFGDETEWGTGNITSEDGIHSSPTLGE