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Moc09g24290 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g24290
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr9:18244206..18248535
RNA-Seq ExpressionMoc09g24290
SyntenyMoc09g24290
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154947.1 uncharacterized protein LOC111022090 [Momordica charantia]4.2e-1472.41Show/hide
Query:  HIDHDIASLTPLDIDVVPCNLGDDIVCDWDAPGMWNDNEEVDDDESDESYDPLIELEE
        H+ HDIA LTPL+ DVVPCNLGDD VCDW+ PG+WNDN+    DESDESYDPL E EE
Subjt:  HIDHDIASLTPLDIDVVPCNLGDDIVCDWDAPGMWNDNEEVDDDESDESYDPLIELEE
XP_022155970.1 uncharacterized protein LOC111022954 [Momordica charantia]1.5e-1167.24Show/hide
Query:  HIDHDIASLTPLDIDVVPCNLGDDIVCDWDAPGMWNDNEEVDDDESDESYDPLIELEE
        H+ HDIA LTPL+ DVVPCNLGDD VC W+ PG+WNDN+    DESDESYD L + EE
Subjt:  HIDHDIASLTPLDIDVVPCNLGDDIVCDWDAPGMWNDNEEVDDDESDESYDPLIELEE
XP_022156328.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia]2.3e-0772.73Show/hide
Query:  DVVPCNLGDDIVCDWDAPGMWNDNEEVDDDESDESYDPLIELEE
        +VVPCNLGDD VCDWD PG+WNDNE    DES ESYDPL E +E
Subjt:  DVVPCNLGDDIVCDWDAPGMWNDNEEVDDDESDESYDPLIELEE
XP_022157017.1 uncharacterized protein LOC111023843 [Momordica charantia]1.2e-1170.91Show/hide
Query:  HDIASLTPLDIDVVPCNLGDDIVCDWDAPGMWNDNEEVDDDESDESYDPLIELEE
        HD+  LTPL  DVVPCNLGDD VCDWD PG+WNDNE    DES ESYDPL   EE
Subjt:  HDIASLTPLDIDVVPCNLGDDIVCDWDAPGMWNDNEEVDDDESDESYDPLIELEE
TrEMBL top hitse value%identityAlignment
A0A6J1DN26 uncharacterized protein LOC1110220902.1e-1472.41Show/hide
Query:  HIDHDIASLTPLDIDVVPCNLGDDIVCDWDAPGMWNDNEEVDDDESDESYDPLIELEE
        H+ HDIA LTPL+ DVVPCNLGDD VCDW+ PG+WNDN+    DESDESYDPL E EE
Subjt:  HIDHDIASLTPLDIDVVPCNLGDDIVCDWDAPGMWNDNEEVDDDESDESYDPLIELEE
A0A6J1DP00 uncharacterized protein LOC1110229547.3e-1267.24Show/hide
Query:  HIDHDIASLTPLDIDVVPCNLGDDIVCDWDAPGMWNDNEEVDDDESDESYDPLIELEE
        H+ HDIA LTPL+ DVVPCNLGDD VC W+ PG+WNDN+    DESDESYD L + EE
Subjt:  HIDHDIASLTPLDIDVVPCNLGDDIVCDWDAPGMWNDNEEVDDDESDESYDPLIELEE
A0A6J1DQB9 Reverse transcriptase1.1e-0772.73Show/hide
Query:  DVVPCNLGDDIVCDWDAPGMWNDNEEVDDDESDESYDPLIELEE
        +VVPCNLGDD VCDWD PG+WNDNE    DES ESYDPL E +E
Subjt:  DVVPCNLGDDIVCDWDAPGMWNDNEEVDDDESDESYDPLIELEE
A0A6J1DTG5 uncharacterized protein LOC1110238435.6e-1270.91Show/hide
Query:  HDIASLTPLDIDVVPCNLGDDIVCDWDAPGMWNDNEEVDDDESDESYDPLIELEE
        HD+  LTPL  DVVPCNLGDD VCDWD PG+WNDNE    DES ESYDPL   EE
Subjt:  HDIASLTPLDIDVVPCNLGDDIVCDWDAPGMWNDNEEVDDDESDESYDPLIELEE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGTGGTTGTGTTGGAGGTTGGTCTCAGAGTTCGTGAAGTCGTCACCAGAGGTCACCGAAATGTTGTGTCGGAGCTCTTGCCGCCACCATTGCTCGCGTGT
CATCGGAGATCGTGCTCACTCGTTCGTGGTGGATCATTGCTCATTCGTGGGTGTTGTGCCGCCATGGAGATAGCCGTAGATTTGGTAGAATTTGTGTGTGATGCG
TCGCCATGTATGTTGTGCCGCTATGGAGCTCAATTCCTGCTCATTCCTCTTGTCTCCGTTGCGATACCCCTTGATCGTCCCACTTTGTGTGCTGTCCTCTTTGAG
TTATGGCATATAGATCATGATATAGCATCTCTAACACCATTGGATATAGATGTTGTTCCATGTAATCTAGGAGATGACATAGTATGTGATTGGGATGCGCCGGGA
ATGTGGAATGATAACGAAGAGGTGGATGATGATGAAAGTGATGAATCATATGATCCATTGATAGAGTTAGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTACGTGGTTGTGTTGGAGGTTGGTCTCAGAGTTCGTGAAGTCGTCACCAGAGGTCACCGAAATGTTGTGTCGGAGCTCTTGCCGCCACCATTGCTCGCGTGT
CATCGGAGATCGTGCTCACTCGTTCGTGGTGGATCATTGCTCATTCGTGGGTGTTGTGCCGCCATGGAGATAGCCGTAGATTTGGTAGAATTTGTGTGTGATGCG
TCGCCATGTATGTTGTGCCGCTATGGAGCTCAATTCCTGCTCATTCCTCTTGTCTCCGTTGCGATACCCCTTGATCGTCCCACTTTGTGTGCTGTCCTCTTTGAG
TTATGGCATATAGATCATGATATAGCATCTCTAACACCATTGGATATAGATGTTGTTCCATGTAATCTAGGAGATGACATAGTATGTGATTGGGATGCGCCGGGA
ATGTGGAATGATAACGAAGAGGTGGATGATGATGAAAGTGATGAATCATATGATCCATTGATAGAGTTAGAAGAATGA
Protein sequenceShow/hide protein sequence
MYVVVLEVGLRVREVVTRGHRNVVSELLPPPLLACHRRSCSLVRGGSLLIRGCCAAMEIAVDLVEFVCDASPCMLCRYGAQFLLIPLVSVAIPLDRPTLCAVLFE
LWHIDHDIASLTPLDIDVVPCNLGDDIVCDWDAPGMWNDNEEVDDDESDESYDPLIELEE