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Moc09g24430 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g24430
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionU11/U12 small nuclear ribonucleoprotein 48 kDa protein
Genome locationchr9:18341796..18345831
RNA-Seq ExpressionMoc09g24430
SyntenyMoc09g24430
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151686.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Momordica charantia]8.3e-1475.76Show/hide
Query:  GYASELAGCTTLDKVVVMALRVRELIDYLEIIGITTQYRILGSDESSLTLVVSDYYDYLVLASAST
        G  S LAG TT DKVV +ALRVRELIDYLEIIGITTQ RILGSD SSL LV SDYYDY V A+  T
Subjt:  GYASELAGCTTLDKVVVMALRVRELIDYLEIIGITTQYRILGSDESSLTLVVSDYYDYLVLASAST
TrEMBL top hitse value%identityAlignment
A0A6J1DFF2 U11/U12 small nuclear ribonucleoprotein 48 kDa protein4.0e-1475.76Show/hide
Query:  GYASELAGCTTLDKVVVMALRVRELIDYLEIIGITTQYRILGSDESSLTLVVSDYYDYLVLASAST
        G  S LAG TT DKVV +ALRVRELIDYLEIIGITTQ RILGSD SSL LV SDYYDY V A+  T
Subjt:  GYASELAGCTTLDKVVVMALRVRELIDYLEIIGITTQYRILGSDESSLTLVVSDYYDYLVLASAST
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACCCAACCCTTTTGGCATCCTTTCGGCACTTGCCGACACTCAAACGAAGGTTGATTTGAGTTACCCATTCCTTTTCGGCGTAGGACCAACAAGCCCGAGAATTTT
CGAACTCAGTTTTGAAGTGCCGAGCTTATTCGACAACGACCCACTCCTAACCCAAGAGTTTTTAATGGAATACTTCGGCGAGCTTAGTAGTGTTATGGCCATTTCATGCT
GGTTTTATTGTAAGTTGAGTGCTGCATGGGTCATGGTTGAAAAGCATGTAGGTATCGAGGCTTCAGGTGCAAAGGTTGGAGATCGATACCCTAACTTGGTAGAGTTGAGT
GTCGAGGTTCCGGGTACAAATGGTCGGGGGTTGGCACGGGTCGATGCACAGTTCAAGGGTTTGGGGATAAATGGCAAGGTCGAACGCCAAGCTTCTGTAGATGAGTGTCG
GGCCTTGGGGATAAATGGCAAGGGCCGATATGATTCGAGGAGTCCAACGTCGAGCACCGTAGAGAATTGTGGATGCCTTGGCTATGCGAGCGAACTTGCGGGTTGTACCA
CTTTGGATAAGGTGGTTGTAATGGCTCTACGGGTACGGGAGCTAATAGATTACCTTGAAATAATTGGGATAACAACTCAGTATAGGATATTGGGATCAGATGAAAGCTCT
CTCACTTTAGTTGTCTCCGACTACTATGATTATCTGGTCCTTGCTAGTGCATCCACTTGCGCTTCGAGATTACTGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATACCCAACCCTTTTGGCATCCTTTCGGCACTTGCCGACACTCAAACGAAGGTTGATTTGAGTTACCCATTCCTTTTCGGCGTAGGACCAACAAGCCCGAGAATTTT
CGAACTCAGTTTTGAAGTGCCGAGCTTATTCGACAACGACCCACTCCTAACCCAAGAGTTTTTAATGGAATACTTCGGCGAGCTTAGTAGTGTTATGGCCATTTCATGCT
GGTTTTATTGTAAGTTGAGTGCTGCATGGGTCATGGTTGAAAAGCATGTAGGTATCGAGGCTTCAGGTGCAAAGGTTGGAGATCGATACCCTAACTTGGTAGAGTTGAGT
GTCGAGGTTCCGGGTACAAATGGTCGGGGGTTGGCACGGGTCGATGCACAGTTCAAGGGTTTGGGGATAAATGGCAAGGTCGAACGCCAAGCTTCTGTAGATGAGTGTCG
GGCCTTGGGGATAAATGGCAAGGGCCGATATGATTCGAGGAGTCCAACGTCGAGCACCGTAGAGAATTGTGGATGCCTTGGCTATGCGAGCGAACTTGCGGGTTGTACCA
CTTTGGATAAGGTGGTTGTAATGGCTCTACGGGTACGGGAGCTAATAGATTACCTTGAAATAATTGGGATAACAACTCAGTATAGGATATTGGGATCAGATGAAAGCTCT
CTCACTTTAGTTGTCTCCGACTACTATGATTATCTGGTCCTTGCTAGTGCATCCACTTGCGCTTCGAGATTACTGCCTTGA
Protein sequenceShow/hide protein sequence
MIPNPFGILSALADTQTKVDLSYPFLFGVGPTSPRIFELSFEVPSLFDNDPLLTQEFLMEYFGELSSVMAISCWFYCKLSAAWVMVEKHVGIEASGAKVGDRYPNLVELS
VEVPGTNGRGLARVDAQFKGLGINGKVERQASVDECRALGINGKGRYDSRSPTSSTVENCGCLGYASELAGCTTLDKVVVMALRVRELIDYLEIIGITTQYRILGSDESS
LTLVVSDYYDYLVLASASTCASRLLP