CuGenDBv2

Gene ID	Moc09g24760
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Mannan endo-1,4-beta-mannosidase
Genome location	chr9:18554173..18555705
RNA-Seq Expression	Moc09g24760
Synteny	Moc09g24760
Gene Ontology terms	GO:0071704 - organic substance metabolic process (biological process) GO:0005576 - extracellular region (cellular component) GO:0016985 - mannan endo-1,4-beta-mannosidase activity (molecular function)
InterPro domains	IPR035992 - Ricin B-like lectins

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0055143.1 endoglucanase-like [Cucumis melo var. makuwa]

2.4e-47

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Query:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL
        FIMYHP  GGCVRMNK YQLGI SCK SNRWSH+ DG P+ LAGS LCLKA+G GLPPILS+DCSS+QS W+Y SNAKLQLA++DEQGQ LCL + SHS 
Subjt:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL

Query:  LIVTKNCKCPSDSQCKGNPQSQWFDHNPKH
         IVT  C C +DSQC+ +PQSQWF   P +
Subjt:  LIVTKNCKCPSDSQCKGNPQSQWFDHNPKH

KAE8648505.1 hypothetical protein Csa_007897 [Cucumis sativus]

8.3e-48

68.46

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Query:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL
        FIMYHP  G CVRMNK YQLG+ SCK SNRWSH+ DG P+ L GS LCL+AVG+GLPPILS+DCSS+QSAW+YASNAKLQLA++DE+GQ LCL + SHS 
Subjt:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL

Query:  LIVTKNCKCPSDSQCKGNPQSQWFDHNPKH
         I+T  C CP+DS+C+G+PQSQWF   P +
Subjt:  LIVTKNCKCPSDSQCKGNPQSQWFDHNPKH

TYK00314.1 endoglucanase-like [Cucumis melo var. makuwa]

4.1e-47

70.77

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Query:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL
        FIMYHP  GGCVRMNK YQLGI SCK SNRWSH+ D  P+ LAGS LCLKA+G GLPPILS+DCSS+QS WRYASNAKLQLA++DEQGQ LCL + SHS 
Subjt:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL

Query:  LIVTKNCKCPSDSQCKGNPQSQWFDHNPKH
         IVT  C C  DSQC+ +PQSQWF   P +
Subjt:  LIVTKNCKCPSDSQCKGNPQSQWFDHNPKH

XP_008467257.1 PREDICTED: endoglucanase-like [Cucumis melo]

8.3e-48

71.54

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Query:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL
        FIMYHP  GGCVRMNK YQLGI SCK SNRWSH+ DG P+ LAGS LCLKA+G GLPPILS+DCSS+QS WRYASNAKLQLA++DEQGQ LCL + SHS 
Subjt:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL

Query:  LIVTKNCKCPSDSQCKGNPQSQWFDHNPKH
         IVT  C C  DSQC+ +PQSQWF   P +
Subjt:  LIVTKNCKCPSDSQCKGNPQSQWFDHNPKH

XP_031739082.1 glycosyl hydrolase 5 family protein [Cucumis sativus]

8.3e-48

69.23

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Query:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL
        FIMYHP  G CVRMNK YQLG+ SCK SNRWSH+ D  P+ LAGS LCL+AVG+GLPPILS+DCSS+QSAW+YASNAKLQLA++DEQGQ LCL + SHS 
Subjt:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL

Query:  LIVTKNCKCPSDSQCKGNPQSQWFDHNPKH
         I+T  C CP+DS+C+G+PQSQWF   P +
Subjt:  LIVTKNCKCPSDSQCKGNPQSQWFDHNPKH

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CT43 Mannan endo-1,4-beta-mannosidase

4.0e-48

71.54

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Query:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL
        FIMYHP  GGCVRMNK YQLGI SCK SNRWSH+ DG P+ LAGS LCLKA+G GLPPILS+DCSS+QS WRYASNAKLQLA++DEQGQ LCL + SHS 
Subjt:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL

Query:  LIVTKNCKCPSDSQCKGNPQSQWFDHNPKH
         IVT  C C  DSQC+ +PQSQWF   P +
Subjt:  LIVTKNCKCPSDSQCKGNPQSQWFDHNPKH

A0A5A7UGS0 Mannan endo-1,4-beta-mannosidase

1.2e-47

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Query:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL
        FIMYHP  GGCVRMNK YQLGI SCK SNRWSH+ DG P+ LAGS LCLKA+G GLPPILS+DCSS+QS W+Y SNAKLQLA++DEQGQ LCL + SHS 
Subjt:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL

Query:  LIVTKNCKCPSDSQCKGNPQSQWFDHNPKH
         IVT  C C +DSQC+ +PQSQWF   P +
Subjt:  LIVTKNCKCPSDSQCKGNPQSQWFDHNPKH

A0A5A7UJG7 Mannan endo-1,4-beta-mannosidase

2.0e-47

73.39

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Query:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL
        FIMYHP  GGCVRMNK YQLGI SCK SNRWSH+ D  P+ LAGS LCLKA+G GLPPILS+DCSS+QS WRYASNAKLQLA++DEQGQ LCL + SHS 
Subjt:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL

Query:  LIVTKNCKCPSDSQCKGNPQSQWF
         IVT  C C  DSQC+ +PQSQWF
Subjt:  LIVTKNCKCPSDSQCKGNPQSQWF

A0A5D3BM14 Mannan endo-1,4-beta-mannosidase

2.0e-47

70.77

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Query:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL
        FIMYHP  GGCVRMNK YQLGI SCK SNRWSH+ D  P+ LAGS LCLKA+G GLPPILS+DCSS+QS WRYASNAKLQLA++DEQGQ LCL + SHS 
Subjt:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL

Query:  LIVTKNCKCPSDSQCKGNPQSQWFDHNPKH
         IVT  C C  DSQC+ +PQSQWF   P +
Subjt:  LIVTKNCKCPSDSQCKGNPQSQWFDHNPKH

A0A5D3CGT4 Mannan endo-1,4-beta-mannosidase

2.6e-47

69.23

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Query:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL
        FIMYHP  GGC+RMNK YQLGI SCK SNRWSH+ DG P+ LAGS LCLKA+G GLPPILS+DCSS+QS W+Y SNAKLQLA++DEQGQ LCL + SHS 
Subjt:  FIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSL

Query:  LIVTKNCKCPSDSQCKGNPQSQWFDHNPKH
         IVT  C C +DSQC+ +PQSQWF   P +
Subjt:  LIVTKNCKCPSDSQCKGNPQSQWFDHNPKH

SwissProt top hits

e value

%identity

Alignment

C0HLA0 Glycosyl hydrolase 5 family protein

8.7e-16

38.64

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Query:  IMYHPRGGGCVRMNKNYQLGIISCK-ISNRWSHDID-GGPLMLAGSKLCLKAVGNGLPPILSRDCSS-RQSAWRYASNAKLQLAS----IDEQGQLLCLH
        I+YHP  G CV       + + SC+ + +RW++D    GP+ L GS  C+   GNGLP I++ +CS+   + W   S+A+LQL +     D + + +CL 
Subjt:  IMYHPRGGGCVRMNKNYQLGIISCK-ISNRWSHDID-GGPLMLAGSKLCLKAVGNGLPPILSRDCSS-RQSAWRYASNAKLQLAS----IDEQGQLLCLH

Query:  KPSHSLLIVTKNCKCPSDSQC--KGNPQSQWF
          S S LI T  C C +DS C  K NP+ QWF
Subjt:  KPSHSLLIVTKNCKCPSDSQC--KGNPQSQWF

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTTCATAATGTATCATCCTCGTGGCGGTGGGTGCGTGCGAATGAACAAAAACTATCAATTAGGAATTATTAGTTGCAAGATTTCGAACCGGTGGAGTCACGATATAGA
TGGAGGTCCACTCATGTTGGCAGGCTCTAAATTGTGTTTGAAAGCAGTAGGAAATGGCCTCCCTCCAATTCTCTCTCGTGATTGCTCCAGCCGACAAAGTGCTTGGAGAT
ATGCTTCAAATGCCAAGCTTCAACTGGCATCCATTGATGAACAAGGACAACTCTTATGCTTGCATAAGCCTTCTCATTCGCTTCTAATTGTGACTAAAAACTGCAAGTGT
CCGAGTGATTCACAATGCAAAGGCAATCCACAAAGCCAATGGTTTGACCATAATCCGAAACATTTTGCACCGTCCGACACATATAAAGCTTGGCTAGATCGACCAGCTTG
GCTCCCATCTACATCACAAGCTATTCTTGCACATTTCAGACCAACGATCGCTTCGGTGTTGGCCTCGACATTTGTGGAGGCCGACTTGGACCCTGCCTTTAAGGAACTAC
TCCCATATGGACGCTTTCTCTTTACAGCGTTGGCAAATCCACACACCATGGCTGTGAGAGATGGTGTTGTTGTCCACAAGCAGTTTGTCAGTGATCAATGTGCTCACCTT
CCAAGAGGATTCTTACTGGTTACGAAAGTACTTCAGATATAG

mRNA sequence

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Protein sequence

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MFIMYHPRGGGCVRMNKNYQLGIISCKISNRWSHDIDGGPLMLAGSKLCLKAVGNGLPPILSRDCSSRQSAWRYASNAKLQLASIDEQGQLLCLHKPSHSLLIVTKNCKC
PSDSQCKGNPQSQWFDHNPKHFAPSDTYKAWLDRPAWLPSTSQAILAHFRPTIASVLASTFVEADLDPAFKELLPYGRFLFTALANPHTMAVRDGVVVHKQFVSDQCAHL
PRGFLLVTKVLQI

Moc09g24760 (gene) of Bitter gourd (OHB3-1) v2 genome