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Moc09g24910 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g24910
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:18632930..18635726
RNA-Seq ExpressionMoc09g24910
SyntenyMoc09g24910
Gene Ontology termsGO:0043167 - ion binding (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5759684.1 putative RNA-directed DNA polymerase [Helianthus annuus]9.4e-1264.06Show/hide
Query:  ADAVVRIVEESHARGELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAY
        A A   IV E +   +LN DNYEIW+MKIQYVLEEQEA EVL+++L EP EGN+AQH RD+E Y
Subjt:  ADAVVRIVEESHARGELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAY

KAF5799909.1 hypothetical protein HanXRQr2_Chr07g0309911 [Helianthus annuus]9.4e-1264.06Show/hide
Query:  ADAVVRIVEESHARGELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAY
        A A   IV E +   +LN DNYEIW+MKIQYVLEEQEA EVL+++L EP EGN+AQH RD+E Y
Subjt:  ADAVVRIVEESHARGELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAY

MBW0583023.1 hypothetical protein [Austropuccinia psidii MF-1]7.2e-1263.64Show/hide
Query:  ADAVVRIVEESHARGELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAYEA
        A A   IV E +   +LN DNYEIW MKIQYVLEEQEALE L+  + EPEEG +AQH RDKEA+ A
Subjt:  ADAVVRIVEESHARGELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAYEA

XP_009794640.1 PREDICTED: uncharacterized protein LOC104241402 [Nicotiana sylvestris]2.1e-1160Show/hide
Query:  IVEESHARGELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAYEA
        IV E +   +LN DNYE W++K+QYVLEEQEALE ++NV+ EPEEGN+AQH R+++AY++
Subjt:  IVEESHARGELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAYEA

XP_030517298.1 uncharacterized protein LOC115730819 [Rhodamnia argentea]5.2e-1054.55Show/hide
Query:  ADAVVRIVEESHARGELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAYEA
        A A   IV + +   +LN DNY+IW  K+QY+LEEQE LE L++ + +PE+GNSAQH RD EAY+A
Subjt:  ADAVVRIVEESHARGELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAYEA

TrEMBL top hitse value%identityAlignment
A0A1U7Y748 uncharacterized protein LOC1042414021.0e-1160Show/hide
Query:  IVEESHARGELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAYEA
        IV E +   +LN DNYE W++K+QYVLEEQEALE ++NV+ EPEEGN+AQH R+++AY++
Subjt:  IVEESHARGELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAYEA

A0A251RYZ8 Putative zinc finger, CCHC-type5.0e-1173.47Show/hide
Query:  ELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAY
        +LN DNYEIW+MKIQYVLEEQEA EVL+++L EP EGN+AQH RD+E Y
Subjt:  ELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAY

A0A565BA24 Uncharacterized protein8.1e-0950Show/hide
Query:  QAGADAVVR-IVEESHARGELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAYEA
        Q G  +V + I+ E +  G+L+ DNY+IW  K+QYVLEEQE  E L +++ EPE+G +A H RD+EAY A
Subjt:  QAGADAVVR-IVEESHARGELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAYEA

A0A6V7NY41 Uncharacterized protein3.6e-0955Show/hide
Query:  IVEESHARGELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAYEA
        I+ + +   +L+ DNY IW  KIQYVLEEQ+ALE + + +T+P EGN+AQH RD+EAY A
Subjt:  IVEESHARGELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAYEA

S8CCZ0 CCHC-type domain-containing protein1.6e-0957.81Show/hide
Query:  AVVRIVEESHARGELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAYEA
        A   IV E +   +LN DNY+ W MKIQYV+EEQ+ LE LSN L +PE G +AQH RD EAY+A
Subjt:  AVVRIVEESHARGELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAYEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCACGCACACGCCGTCGAGCGGTCGTCAGGCAGGTGCCGACGCAGTCGTGCGCATTGTAGAAGAGAGTCACGCTAGGGGAGAACTTAATAGAGATAATTATGAGAT
TTGGGCCATGAAAATCCAGTATGTATTGGAAGAGCAAGAGGCTCTAGAAGTATTAAGCAATGTGTTGACTGAGCCTGAAGAGGGCAATAGTGCTCAACATGGGAGGGACA
AAGAGGCTTATGAAGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCACGCACACGCCGTCGAGCGGTCGTCAGGCAGGTGCCGACGCAGTCGTGCGCATTGTAGAAGAGAGTCACGCTAGGGGAGAACTTAATAGAGATAATTATGAGAT
TTGGGCCATGAAAATCCAGTATGTATTGGAAGAGCAAGAGGCTCTAGAAGTATTAAGCAATGTGTTGACTGAGCCTGAAGAGGGCAATAGTGCTCAACATGGGAGGGACA
AAGAGGCTTATGAAGCCTAG
Protein sequenceShow/hide protein sequence
MVTHTPSSGRQAGADAVVRIVEESHARGELNRDNYEIWAMKIQYVLEEQEALEVLSNVLTEPEEGNSAQHGRDKEAYEA