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Moc09g25360 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g25360
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2
Genome locationchr9:18960722..18961111
RNA-Seq ExpressionMoc09g25360
SyntenyMoc09g25360
Gene Ontology termsGO:0034641 - cellular nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:1901564 - organonitrogen compound metabolic process (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR025525 - hAT-like transposase, RNase-H fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7802170.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Senna tora]1.8e-2348.06Show/hide
Query:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDSSTNFSWVKNKEELGDDFE
        M SKMMTKF+KYW+I+HGVM VA VLDPR+K+KL+E++FP  YG+ S +++EK+K  C NL  EY+ K      +  +S ++          +++GD  +
Subjt:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDSSTNFSWVKNKEELGDDFE

Query:  EYDQFVSSSDTIGRQTELDLYLEEPVLPR
         YD FVSS  ++ + +ELDLYLEE VLPR
Subjt:  EYDQFVSSSDTIGRQTELDLYLEEPVLPR

KAF7822111.1 putative AC transposase [Senna tora]7.4e-2245.74Show/hide
Query:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDSSTNFSWVKNKEELGDDFE
        M SKMMTKF+KYW+ +HGVM VA VLDPR+K+KL+E++FP  YG+ S +++EK+K  C +L  EY+ K      +  +S +           +++GD  +
Subjt:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDSSTNFSWVKNKEELGDDFE

Query:  EYDQFVSSSDTIGRQTELDLYLEEPVLPR
         YD FV+S  ++ + +ELDLYLEE VLPR
Subjt:  EYDQFVSSSDTIGRQTELDLYLEEPVLPR

TQD99086.1 hypothetical protein C1H46_015287 [Malus baccata]4.3e-2249.62Show/hide
Query:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKH--NHRVDVYSQSHDSSTNFSWVKNKEELGDD
        M +KM  KF+KYW  IHG MA+AA+LDPRFKMKLIE+YF  +Y + +  ++EKV      LVKEY++KH   HR    S    SST+F        +GD 
Subjt:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKH--NHRVDVYSQSHDSSTNFSWVKNKEELGDD

Query:  FEEYDQFVSSSDTIGRQTELDLYLEEPVLPR
           YDQFV  S     Q++LDLYL E VLPR
Subjt:  FEEYDQFVSSSDTIGRQTELDLYLEEPVLPR

XP_017187605.1 zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 [Malus domestica]5.1e-2350.38Show/hide
Query:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKH--NHRVDVYSQSHDSSTNFSWVKNKEELGDD
        M +KM  KF+KYW  IHG MA+AA+LDPRFKMKLIE+YFP +Y + +  ++EKV      LVKEY++KH   HR    S    SST+F        +GD 
Subjt:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKH--NHRVDVYSQSHDSSTNFSWVKNKEELGDD

Query:  FEEYDQFVSSSDTIGRQTELDLYLEEPVLPR
           YDQFV  S     Q++LDLYL E VLPR
Subjt:  FEEYDQFVSSSDTIGRQTELDLYLEEPVLPR

XP_017187606.1 zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 [Malus domestica]5.1e-2350.38Show/hide
Query:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKH--NHRVDVYSQSHDSSTNFSWVKNKEELGDD
        M +KM  KF+KYW  IHG MA+AA+LDPRFKMKLIE+YFP +Y + +  ++EKV      LVKEY++KH   HR    S    SST+F        +GD 
Subjt:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKH--NHRVDVYSQSHDSSTNFSWVKNKEELGDD

Query:  FEEYDQFVSSSDTIGRQTELDLYLEEPVLPR
           YDQFV  S     Q++LDLYL E VLPR
Subjt:  FEEYDQFVSSSDTIGRQTELDLYLEEPVLPR

TrEMBL top hitse value%identityAlignment
A0A2Z6PIX9 Uncharacterized protein3.3e-2043.18Show/hide
Query:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDSSTNFSWVKNKEELGDD--
        M S+M  KF+KYW+IIHG M +A VLDPRFK K +E+++ +LYG  S +++E +K  C +L ++YQ + N  V+      +SS NF   +   + G++  
Subjt:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDSSTNFSWVKNKEELGDD--

Query:  -FEEYDQFVSSSDTIGRQTELDLYLEEPVLPR
           ++D FV+ +D I  +TELD+YLEE VLPR
Subjt:  -FEEYDQFVSSSDTIGRQTELDLYLEEPVLPR

A0A540MJX5 BED-type domain-containing protein2.1e-2249.62Show/hide
Query:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKH--NHRVDVYSQSHDSSTNFSWVKNKEELGDD
        M +KM  KF+KYW  IHG MA+AA+LDPRFKMKLIE+YF  +Y + +  ++EKV      LVKEY++KH   HR    S    SST+F        +GD 
Subjt:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKH--NHRVDVYSQSHDSSTNFSWVKNKEELGDD

Query:  FEEYDQFVSSSDTIGRQTELDLYLEEPVLPR
           YDQFV  S     Q++LDLYL E VLPR
Subjt:  FEEYDQFVSSSDTIGRQTELDLYLEEPVLPR

A0A5C7GWG6 Uncharacterized protein4.7e-2243.61Show/hide
Query:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDSSTNFSWVKNKE---ELGD
        +T  M+TKF++YW +IHG+MAVAA+LDPR+KMKLIE+YFP +YGD ++ K+EK++  C +LV +Y++      ++  + H   TN S  + +E   E  +
Subjt:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDSSTNFSWVKNKE---ELGD

Query:  DFEEYDQFVS-SSDTIGRQTELDLYLEEPVLPR
          E +D FVS ++ T   +++ D YLEEP++PR
Subjt:  DFEEYDQFVS-SSDTIGRQTELDLYLEEPVLPR

A0A5C7H408 DUF4413 domain-containing protein2.3e-2144.62Show/hide
Query:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDSSTNFSWVKNKEELGDDFE
        M + M+ KFDKYW +IHG++A+A +LDPRFK+KLIE+YFP++Y + S   +++V+  C +LV EYQ+K++   D      D         ++ +  D   
Subjt:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDSSTNFSWVKNKEELGDDFE

Query:  EYDQFVSSSDTI-GRQTELDLYLEEPVLPR
         YD FVSS+  + G ++ELD YLEEPVLPR
Subjt:  EYDQFVSSSDTI-GRQTELDLYLEEPVLPR

A0A5C7HKE4 Uncharacterized protein8.8e-2144.62Show/hide
Query:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDSSTNFSWVKNKEELGDDFE
        + S  + KF+KYW +I+G+MAVA VLDPRFKMK++EFYFP +YGD S  ++EKV+  C  LVKEYQ+      +   +   S +  S   +K+++ D   
Subjt:  MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDSSTNFSWVKNKEELGDDFE

Query:  EYDQFVSSSDTIGR-QTELDLYLEEPVLPR
          D F SS+ T    ++ELD YLEE + PR
Subjt:  EYDQFVSSSDTIGR-QTELDLYLEEPVLPR

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 11.5e-0931.54Show/hide
Query:  MMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQ----SHDSSTNFSWVKNKEELGDDFE
        M  +FDKYW   + V+A+A V+DPRFKMKL+EF + ++YG  +   V+ V      L  EY  +       Y +    ++  ++  S        GD   
Subjt:  MMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQ----SHDSSTNFSWVKNKEELGDDFE

Query:  EYDQFVSSSDTI-GRQTELDLYLEEPVLPR
        ++D ++S   T    ++EL+ YL+E + PR
Subjt:  EYDQFVSSSDTI-GRQTELDLYLEEPVLPR

Q0JMB2 Zinc finger BED domain-containing protein RICESLEEPER 41.8e-0730.15Show/hide
Query:  KFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLK-VEKVKIPCSNLVKEYQMK-----------HNHRVDVYSQSHDSSTNFSWVKNKEEL
        KFDKYW   + V+A+A  +DPRFKMK++EF + ++YG     K V+ V     +L KEY  +                D            +   +    
Subjt:  KFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLK-VEKVKIPCSNLVKEYQMK-----------HNHRVDVYSQSHDSSTNFSWVKNKEEL

Query:  GDDFEEYDQFVSSSDTIGR--QTELDLYLEEPVLPR
        G    ++D ++S   T+G+  + EL+LYLEE +  R
Subjt:  GDDFEEYDQFVSSSDTIGR--QTELDLYLEEPVLPR

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 23.0e-1032.31Show/hide
Query:  MMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDS----STNFSWVKNKEELGDDFE
        M  +FDKYW   + V+A+A V+DPRFKMKL+EF + ++YG  +   V+ V      L KEY  +       Y +  D     ++           GD   
Subjt:  MMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDS----STNFSWVKNKEELGDDFE

Query:  EYDQFVSSSDTI-GRQTELDLYLEEPVLPR
        ++D ++S   T    ++EL+ YL+E + PR
Subjt:  EYDQFVSSSDTI-GRQTELDLYLEEPVLPR

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 32.6e-0931.54Show/hide
Query:  TSKMM-TKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDSSTNFSWVKNKEELGDDFE
        T+K+M  +FDKYW   + V+A+A V+DPRFKMKL+EF + +++   +   V+ V      L  EY  +     D +   + ++            GD+  
Subjt:  TSKMM-TKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDSSTNFSWVKNKEELGDDFE

Query:  EYDQFVSSSDTIGRQ-TELDLYLEEPVLPR
        ++D ++S   T     +EL+ YLEE ++PR
Subjt:  EYDQFVSSSDTIGRQ-TELDLYLEEPVLPR

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER2.6e-0932Show/hide
Query:  MMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDSSTNFSWVKNKEELGDDFEEYDQ
        M  K DKYW     V+A+A V+DPRFKMKL+EF F +++G+ +   ++ V      L  EY             +  S  N +    K    D   ++D 
Subjt:  MMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDSSTNFSWVKNKEELGDDFEEYDQ

Query:  FVSSSDTIGRQTELDLYLEEPVLPR
        ++  +     ++ELD YL+E +LPR
Subjt:  FVSSSDTIGRQTELDLYLEEPVLPR

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain1.8e-1032Show/hide
Query:  MMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDSSTNFSWVKNKEELGDDFEEYDQ
        M  K DKYW     V+A+A V+DPRFKMKL+EF F +++G+ +   ++ V      L  EY             +  S  N +    K    D   ++D 
Subjt:  MMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDSSTNFSWVKNKEELGDDFEEYDQ

Query:  FVSSSDTIGRQTELDLYLEEPVLPR
        ++  +     ++ELD YL+E +LPR
Subjt:  FVSSSDTIGRQTELDLYLEEPVLPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCAAAAATGATGACAAAGTTTGACAAGTATTGGACGATAATTCATGGAGTAATGGCAGTAGCAGCAGTCTTAGATCCACGTTTCAAGATGAAATTGATT
GAGTTTTACTTTCCTCGGCTTTATGGAGATAGATCTTTTCTTAAGGTCGAGAAAGTTAAAATTCCTTGTTCAAATTTGGTGAAGGAATATCAAATGAAACATAAT
CATAGAGTCGATGTTTATTCTCAGAGTCATGATTCTTCCACAAATTTTAGTTGGGTAAAAAATAAGGAAGAGTTGGGAGATGATTTTGAAGAGTATGATCAGTTT
GTTTCAAGTTCTGATACAATTGGTAGACAGACCGAATTGGATCTGTATTTAGAGGAACCTGTTCTACCCCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTTCAAAAATGATGACAAAGTTTGACAAGTATTGGACGATAATTCATGGAGTAATGGCAGTAGCAGCAGTCTTAGATCCACGTTTCAAGATGAAATTGATT
GAGTTTTACTTTCCTCGGCTTTATGGAGATAGATCTTTTCTTAAGGTCGAGAAAGTTAAAATTCCTTGTTCAAATTTGGTGAAGGAATATCAAATGAAACATAAT
CATAGAGTCGATGTTTATTCTCAGAGTCATGATTCTTCCACAAATTTTAGTTGGGTAAAAAATAAGGAAGAGTTGGGAGATGATTTTGAAGAGTATGATCAGTTT
GTTTCAAGTTCTGATACAATTGGTAGACAGACCGAATTGGATCTGTATTTAGAGGAACCTGTTCTACCCCGATGA
Protein sequenceShow/hide protein sequence
MTSKMMTKFDKYWTIIHGVMAVAAVLDPRFKMKLIEFYFPRLYGDRSFLKVEKVKIPCSNLVKEYQMKHNHRVDVYSQSHDSSTNFSWVKNKEELGDDFEEYDQF
VSSSDTIGRQTELDLYLEEPVLPR