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Moc09g25690 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g25690
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:19206031..19207159
RNA-Seq ExpressionMoc09g25690
SyntenyMoc09g25690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143608.1 uncharacterized protein LOC111013464 [Momordica charantia]3.4e-5096.15Show/hide
Query:  RAAPKKQNPAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLATPIQPVQSDYCTPAPVCQVNDLICSFCSENHIYDNCPHNPASVFYVGHGNNRNFNP
        RAAPKKQ+PAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLA PIQPVQ DYCTPAPVCQVNDLICSFCSENHIYDNCPHNPASVFYV HGNNRNFNP
Subjt:  RAAPKKQNPAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLATPIQPVQSDYCTPAPVCQVNDLICSFCSENHIYDNCPHNPASVFYVGHGNNRNFNP

Query:  YSNT
        YSNT
Subjt:  YSNT

XP_022150317.1 uncharacterized protein LOC111018514 [Momordica charantia]2.7e-3166.67Show/hide
Query:  SRAAPKKQNPAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLATPIQPVQSDYCTPAPVCQVNDLICSFCSENHIYDNCPHNPASVFYVGHGNNRNFN
        S+ APKKQ+ AGVLALDIATSMQKEM TMNQ LKE+AL  K   + P  P Q +Y   +PVCQ+N+++CS+CS+NH+Y+NCPHNPAS +YVGHG NR FN
Subjt:  SRAAPKKQNPAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLATPIQPVQSDYCTPAPVCQVNDLICSFCSENHIYDNCPHNPASVFYVGHGNNRNFN

Query:  PYSNT
        PYSNT
Subjt:  PYSNT

XP_022150327.1 uncharacterized protein LOC111018524 [Momordica charantia]2.2e-1766.67Show/hide
Query:  MADIPPRDPVDPPAVNGDTRDHARNDEFNHIQMADNRDVAMREYAATAFQNFDSGKVNPIPAHANFELKPMI
        M +IPP++P DPP VNG+     +N+EFNHI MADNRDVAMREYAATAFQN DS  +NPIP  AN ELKP++
Subjt:  MADIPPRDPVDPPAVNGDTRDHARNDEFNHIQMADNRDVAMREYAATAFQNFDSGKVNPIPAHANFELKPMI

XP_022158408.1 uncharacterized protein LOC111024897, partial [Momordica charantia]4.3e-4541.25Show/hide
Query:  MADIPPRDPVDPPAVNGDTRDHARNDEFNHIQMADNRDVAMREYAATAFQNFDSGKVNPIPAHANFELKPMI----------------------------
        MADIPPRDPVDPPAVNG+ RDHARNDEFN+IQMADNRDVAMREYAATAFQNFDSG VNPIPAH NFELKPM+                            
Subjt:  MADIPPRDPVDPPAVNGDTRDHARNDEFNHIQMADNRDVAMREYAATAFQNFDSGKVNPIPAHANFELKPMI----------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------SRAAPKKQNPAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLATPIQ
                                                           SRAAPKKQ+PAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLAT IQ
Subjt:  ---------------------------------------------------SRAAPKKQNPAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLATPIQ

Query:  PVQSDYCTPAPVCQVNDLIC
        PVQSDYCT APVCQVNDLIC
Subjt:  PVQSDYCTPAPVCQVNDLIC

XP_022159345.1 uncharacterized protein LOC111025764 [Momordica charantia]3.4e-5094.29Show/hide
Query:  SRAAPKKQNPAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLATPIQPVQSDYCTPAPVCQVNDLICSFCSENHIYDNCPHNPASVFYVGHGNNRNFN
        SRAAPKKQ+PAGVLALDIA+SMQKE VTMNQRLKEM LG+KNPLATPIQPVQSDYCTPAPVCQVNDLICSFCSENHIYD CPHNPASVFYVGHGNNRNFN
Subjt:  SRAAPKKQNPAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLATPIQPVQSDYCTPAPVCQVNDLICSFCSENHIYDNCPHNPASVFYVGHGNNRNFN

Query:  PYSNT
        PYSNT
Subjt:  PYSNT

TrEMBL top hitse value%identityAlignment
A0A6J1CR45 uncharacterized protein LOC1110134641.6e-5096.15Show/hide
Query:  RAAPKKQNPAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLATPIQPVQSDYCTPAPVCQVNDLICSFCSENHIYDNCPHNPASVFYVGHGNNRNFNP
        RAAPKKQ+PAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLA PIQPVQ DYCTPAPVCQVNDLICSFCSENHIYDNCPHNPASVFYV HGNNRNFNP
Subjt:  RAAPKKQNPAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLATPIQPVQSDYCTPAPVCQVNDLICSFCSENHIYDNCPHNPASVFYVGHGNNRNFNP

Query:  YSNT
        YSNT
Subjt:  YSNT

A0A6J1DAE9 uncharacterized protein LOC1110185141.3e-3166.67Show/hide
Query:  SRAAPKKQNPAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLATPIQPVQSDYCTPAPVCQVNDLICSFCSENHIYDNCPHNPASVFYVGHGNNRNFN
        S+ APKKQ+ AGVLALDIATSMQKEM TMNQ LKE+AL  K   + P  P Q +Y   +PVCQ+N+++CS+CS+NH+Y+NCPHNPAS +YVGHG NR FN
Subjt:  SRAAPKKQNPAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLATPIQPVQSDYCTPAPVCQVNDLICSFCSENHIYDNCPHNPASVFYVGHGNNRNFN

Query:  PYSNT
        PYSNT
Subjt:  PYSNT

A0A6J1DAG1 uncharacterized protein LOC1110185241.1e-1766.67Show/hide
Query:  MADIPPRDPVDPPAVNGDTRDHARNDEFNHIQMADNRDVAMREYAATAFQNFDSGKVNPIPAHANFELKPMI
        M +IPP++P DPP VNG+     +N+EFNHI MADNRDVAMREYAATAFQN DS  +NPIP  AN ELKP++
Subjt:  MADIPPRDPVDPPAVNGDTRDHARNDEFNHIQMADNRDVAMREYAATAFQNFDSGKVNPIPAHANFELKPMI

A0A6J1DW02 uncharacterized protein LOC1110248972.1e-4541.25Show/hide
Query:  MADIPPRDPVDPPAVNGDTRDHARNDEFNHIQMADNRDVAMREYAATAFQNFDSGKVNPIPAHANFELKPMI----------------------------
        MADIPPRDPVDPPAVNG+ RDHARNDEFN+IQMADNRDVAMREYAATAFQNFDSG VNPIPAH NFELKPM+                            
Subjt:  MADIPPRDPVDPPAVNGDTRDHARNDEFNHIQMADNRDVAMREYAATAFQNFDSGKVNPIPAHANFELKPMI----------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------SRAAPKKQNPAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLATPIQ
                                                           SRAAPKKQ+PAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLAT IQ
Subjt:  ---------------------------------------------------SRAAPKKQNPAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLATPIQ

Query:  PVQSDYCTPAPVCQVNDLIC
        PVQSDYCT APVCQVNDLIC
Subjt:  PVQSDYCTPAPVCQVNDLIC

A0A6J1DYG0 uncharacterized protein LOC1110257641.6e-5094.29Show/hide
Query:  SRAAPKKQNPAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLATPIQPVQSDYCTPAPVCQVNDLICSFCSENHIYDNCPHNPASVFYVGHGNNRNFN
        SRAAPKKQ+PAGVLALDIA+SMQKE VTMNQRLKEM LG+KNPLATPIQPVQSDYCTPAPVCQVNDLICSFCSENHIYD CPHNPASVFYVGHGNNRNFN
Subjt:  SRAAPKKQNPAGVLALDIATSMQKEMVTMNQRLKEMALGIKNPLATPIQPVQSDYCTPAPVCQVNDLICSFCSENHIYDNCPHNPASVFYVGHGNNRNFN

Query:  PYSNT
        PYSNT
Subjt:  PYSNT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATATTCCACCTCGTGATCCGGTTGATCCACCTGCTGTTAACGGTGATACGAGGGATCATGCAAGAAATGATGAATTCAACCATATCCAGATGGCGGACAACAG
AGACGTGGCAATGCGAGAATATGCCGCCACGGCTTTTCAGAACTTTGATTCAGGGAAAGTCAACCCTATTCCAGCCCACGCAAACTTTGAGCTTAAACCAATGATATCTA
GGGCAGCACCAAAGAAGCAAAATCCAGCTGGAGTTTTGGCTCTGGACATTGCGACCTCGATGCAAAAAGAGATGGTTACAATGAACCAGAGGCTGAAAGAGATGGCATTG
GGAATAAAAAATCCATTAGCCACGCCGATACAACCTGTGCAGTCGGATTATTGCACTCCTGCCCCTGTTTGCCAAGTCAACGATCTCATTTGTTCATTTTGCAGTGAAAA
CCATATTTATGATAATTGTCCACATAACCCTGCTTCCGTTTTTTATGTAGGACATGGGAACAATAGGAACTTTAACCCATATTCGAACACTACAACCCAGGTTGGAGGCA
CCACCCTAATTTCTCATGGGAGGTCAAGGAGGTTCGAGCGGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGATATTCCACCTCGTGATCCGGTTGATCCACCTGCTGTTAACGGTGATACGAGGGATCATGCAAGAAATGATGAATTCAACCATATCCAGATGGCGGACAACAG
AGACGTGGCAATGCGAGAATATGCCGCCACGGCTTTTCAGAACTTTGATTCAGGGAAAGTCAACCCTATTCCAGCCCACGCAAACTTTGAGCTTAAACCAATGATATCTA
GGGCAGCACCAAAGAAGCAAAATCCAGCTGGAGTTTTGGCTCTGGACATTGCGACCTCGATGCAAAAAGAGATGGTTACAATGAACCAGAGGCTGAAAGAGATGGCATTG
GGAATAAAAAATCCATTAGCCACGCCGATACAACCTGTGCAGTCGGATTATTGCACTCCTGCCCCTGTTTGCCAAGTCAACGATCTCATTTGTTCATTTTGCAGTGAAAA
CCATATTTATGATAATTGTCCACATAACCCTGCTTCCGTTTTTTATGTAGGACATGGGAACAATAGGAACTTTAACCCATATTCGAACACTACAACCCAGGTTGGAGGCA
CCACCCTAATTTCTCATGGGAGGTCAAGGAGGTTCGAGCGGTTTTAA
Protein sequenceShow/hide protein sequence
MADIPPRDPVDPPAVNGDTRDHARNDEFNHIQMADNRDVAMREYAATAFQNFDSGKVNPIPAHANFELKPMISRAAPKKQNPAGVLALDIATSMQKEMVTMNQRLKEMAL
GIKNPLATPIQPVQSDYCTPAPVCQVNDLICSFCSENHIYDNCPHNPASVFYVGHGNNRNFNPYSNTTTQVGGTTLISHGRSRRFERF