; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g25830 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g25830
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:19310093..19311682
RNA-Seq ExpressionMoc09g25830
SyntenyMoc09g25830
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156835.1 uncharacterized protein LOC111023669 [Momordica charantia]6.1e-6359.66Show/hide
Query:  IETYYKGLDDATRLVIDASANEPLLGKPYAEAFNILERISSNNHSWSNPRAVQGK---------------------------------SIGALASTANVN
        IE YYKGLDDATRLVIDAS N  LL KPYAEAFNILERISSNNHSWS+PRA+QG+                                 ++GA    ANV+
Subjt:  IETYYKGLDDATRLVIDASANEPLLGKPYAEAFNILERISSNNHSWSNPRAVQGK---------------------------------SIGALASTANVN

Query:  QIQGISCSFCEGDHHYNNCPGNPESVYYLGNPQNNINNSYLNTYNPGWRNHPNFSWSGNQGGHNAGTSNAPAFQQK------------------------
         IQGISCSFCEG+HHYNN P NPESVYYLGN QNN  NSY NTYNPGWRNHPNFSWSGNQGG+NAGTSNAPA+QQK                        
Subjt:  QIQGISCSFCEGDHHYNNCPGNPESVYYLGNPQNNINNSYLNTYNPGWRNHPNFSWSGNQGGHNAGTSNAPAFQQK------------------------

Query:  ----LMKQYMANNDATVQSQATSLRNLELLVGQ
            LMK+ M  ND TVQSQA SLRNLE+ VGQ
Subjt:  ----LMKQYMANNDATVQSQATSLRNLELLVGQ

XP_022157438.1 uncharacterized protein LOC111024136 [Momordica charantia]5.9e-5857.85Show/hide
Query:  AEAFNILERISSNNHSWSNPRAVQGKS---------------------------------IGALASTANVNQIQGISCSFCEGDHHYNNCPGNPESVYYL
        AEAFNILERISSNNHSW +P+AVQGKS                                  GA     NVNQIQGISCSF EGDHHYNNCPGNPES    
Subjt:  AEAFNILERISSNNHSWSNPRAVQGKS---------------------------------IGALASTANVNQIQGISCSFCEGDHHYNNCPGNPESVYYL

Query:  GNPQNNINNSYLNTYNPGWRNHPNFSWSGNQGGHNAGTSNAPAFQQ------------KLMKQYMANNDATVQSQATSLRNLELLVGQLATDLKSRPVGT
                                   SGNQGGHNAGTSNAPAFQQ            KLMKQYMANNDATV+ Q + LRNLEL VGQLATDL SRP+G 
Subjt:  GNPQNNINNSYLNTYNPGWRNHPNFSWSGNQGGHNAGTSNAPAFQQ------------KLMKQYMANNDATVQSQATSLRNLELLVGQLATDLKSRPVGT

Query:  LPSDTEVPKRDDKEQCKALTLRSGKALPPAHPNAPASIKEPT
        LPSDTEVPKRD KEQCKALTL SGKALPP H NAPA  KE T
Subjt:  LPSDTEVPKRDDKEQCKALTLRSGKALPPAHPNAPASIKEPT

XP_022158598.1 uncharacterized protein LOC111025053 [Momordica charantia]3.4e-7459.43Show/hide
Query:  IETYYKGLDDATRLVIDASANEPLLGKPYAEAFNILERISSNNHSWSNPRAVQGKSIGALASTANVNQIQGISCSFCEGDHHYNNCPGNPESVYYLGNPQ
        IETYYKGLD+ATRLVIDAS N  LL KPYA+A NILERISS+NHSWS+ RA++GKS   L  + +   +                      S   +    
Subjt:  IETYYKGLDDATRLVIDASANEPLLGKPYAEAFNILERISSNNHSWSNPRAVQGKSIGALASTANVNQIQGISCSFCEGDHHYNNCPGNPESVYYLGNPQ

Query:  NNINNSYLNTYNPGWRNHPNFSWSGNQGGHNAGTSNAPAFQQK----------------------------LMKQYMANNDATVQSQATSLRNLELLVGQ
        NN N SY NTYNP  RNHPNF WSGNQGGHN G SNAP FQQK                            +MKQYMANNDATVQSQA SLRNLEL VGQ
Subjt:  NNINNSYLNTYNPGWRNHPNFSWSGNQGGHNAGTSNAPAFQQK----------------------------LMKQYMANNDATVQSQATSLRNLELLVGQ

Query:  LATDLKSRPVGTLPSDTEVPKRDDKEQCKALTLRSGKALPPAHPNAPASIKEPTQVDQGETQSEQGSESAKVVVPQTDNQL
        LA DLKSRPVG LPSDTEVPKRD KEQC ALTLRSGKALPP HPNAP   KEP Q+ QGE QSEQ SE A+VVVP    Q+
Subjt:  LATDLKSRPVGTLPSDTEVPKRDDKEQCKALTLRSGKALPPAHPNAPASIKEPTQVDQGETQSEQGSESAKVVVPQTDNQL

XP_022158611.1 uncharacterized protein LOC111025065 [Momordica charantia]1.4e-5962.56Show/hide
Query:  IETYYKGLDDATRLVID-ASANEPLLGKPYAEAFNILERISSNNHSWSNPRAVQGKSIGALASTANVNQIQGISCSFCEGDHHYNNCPGNPESVYYLGNP
        IETYYK L+DATRL    A   +   G   +E++  L     N         +Q  S+GAL  TANVNQIQGISCSFCEGDHHYNNCPGNPESVYYLGNP
Subjt:  IETYYKGLDDATRLVID-ASANEPLLGKPYAEAFNILERISSNNHSWSNPRAVQGKSIGALASTANVNQIQGISCSFCEGDHHYNNCPGNPESVYYLGNP

Query:  QNNINNSYLNTYNPGWRNHPNFSWSGNQGGHNAGTSNAPAFQ----------------------------QKLMKQYMANNDATVQSQATSLRNLELLVG
        QNN NN Y NTYNPGWRNHPNFSWSG+QGGHNAGTS+APAFQ                            +KLMKQYMANNDATVQSQATSLRNL+L VG
Subjt:  QNNINNSYLNTYNPGWRNHPNFSWSGNQGGHNAGTSNAPAFQ----------------------------QKLMKQYMANNDATVQSQATSLRNLELLVG

Query:  QLATDLKSRPV
        QLATDLKS+P+
Subjt:  QLATDLKSRPV

XP_022159060.1 uncharacterized protein LOC111025500 [Momordica charantia]5.5e-6451.86Show/hide
Query:  STFYNFNPVIIEPEIEAFKFELKPVTFQMLQ---TIETYYKGLDDATRLVIDASANEPLLGKPYAEAFNILERISSNNHSWSNPRAVQGK----------
        + F  F    +    E FK  ++   +Q +     I+TYY GLDDATRLVIDASAN  LL KPYAEAFNILERISSNN SWS+PRA+ GK          
Subjt:  STFYNFNPVIIEPEIEAFKFELKPVTFQMLQ---TIETYYKGLDDATRLVIDASANEPLLGKPYAEAFNILERISSNNHSWSNPRAVQGK----------

Query:  -----------------------SIGALASTANVNQIQGISCSFCEGDHHYNNCPGNPESVYYLGNPQNNINNSYLNTYNPGWRNHPNFSWSGNQGGHNA
                               ++GA A  ANV+ IQGISCSFC G++ YNNCPGNPESV+YLGN QNN NN Y              +W+G       
Subjt:  -----------------------SIGALASTANVNQIQGISCSFCEGDHHYNNCPGNPESVYYLGNPQNNINNSYLNTYNPGWRNHPNFSWSGNQGGHNA

Query:  GTSNAPAFQQKLMKQYMANNDATVQSQATSLRNLELLVGQLATDLKSRPVGTLPSDTEVPKRDDKEQCKALTLRSGKALPPAHPNAPASIKEPTQ
         T      +++ M +YM NND TVQSQA SLRNLE+ VGQLATDLKS+P G LPSD +VPKRD KEQC ALTLRSGK LP AHPNA    KE  Q
Subjt:  GTSNAPAFQQKLMKQYMANNDATVQSQATSLRNLELLVGQLATDLKSRPVGTLPSDTEVPKRDDKEQCKALTLRSGKALPPAHPNAPASIKEPTQ

TrEMBL top hitse value%identityAlignment
A0A6J1DRG1 uncharacterized protein LOC1110236692.9e-6359.66Show/hide
Query:  IETYYKGLDDATRLVIDASANEPLLGKPYAEAFNILERISSNNHSWSNPRAVQGK---------------------------------SIGALASTANVN
        IE YYKGLDDATRLVIDAS N  LL KPYAEAFNILERISSNNHSWS+PRA+QG+                                 ++GA    ANV+
Subjt:  IETYYKGLDDATRLVIDASANEPLLGKPYAEAFNILERISSNNHSWSNPRAVQGK---------------------------------SIGALASTANVN

Query:  QIQGISCSFCEGDHHYNNCPGNPESVYYLGNPQNNINNSYLNTYNPGWRNHPNFSWSGNQGGHNAGTSNAPAFQQK------------------------
         IQGISCSFCEG+HHYNN P NPESVYYLGN QNN  NSY NTYNPGWRNHPNFSWSGNQGG+NAGTSNAPA+QQK                        
Subjt:  QIQGISCSFCEGDHHYNNCPGNPESVYYLGNPQNNINNSYLNTYNPGWRNHPNFSWSGNQGGHNAGTSNAPAFQQK------------------------

Query:  ----LMKQYMANNDATVQSQATSLRNLELLVGQ
            LMK+ M  ND TVQSQA SLRNLE+ VGQ
Subjt:  ----LMKQYMANNDATVQSQATSLRNLELLVGQ

A0A6J1DTD1 uncharacterized protein LOC1110241362.8e-5857.85Show/hide
Query:  AEAFNILERISSNNHSWSNPRAVQGKS---------------------------------IGALASTANVNQIQGISCSFCEGDHHYNNCPGNPESVYYL
        AEAFNILERISSNNHSW +P+AVQGKS                                  GA     NVNQIQGISCSF EGDHHYNNCPGNPES    
Subjt:  AEAFNILERISSNNHSWSNPRAVQGKS---------------------------------IGALASTANVNQIQGISCSFCEGDHHYNNCPGNPESVYYL

Query:  GNPQNNINNSYLNTYNPGWRNHPNFSWSGNQGGHNAGTSNAPAFQQ------------KLMKQYMANNDATVQSQATSLRNLELLVGQLATDLKSRPVGT
                                   SGNQGGHNAGTSNAPAFQQ            KLMKQYMANNDATV+ Q + LRNLEL VGQLATDL SRP+G 
Subjt:  GNPQNNINNSYLNTYNPGWRNHPNFSWSGNQGGHNAGTSNAPAFQQ------------KLMKQYMANNDATVQSQATSLRNLELLVGQLATDLKSRPVGT

Query:  LPSDTEVPKRDDKEQCKALTLRSGKALPPAHPNAPASIKEPT
        LPSDTEVPKRD KEQCKALTL SGKALPP H NAPA  KE T
Subjt:  LPSDTEVPKRDDKEQCKALTLRSGKALPPAHPNAPASIKEPT

A0A6J1DWK1 uncharacterized protein LOC1110250531.7e-7459.43Show/hide
Query:  IETYYKGLDDATRLVIDASANEPLLGKPYAEAFNILERISSNNHSWSNPRAVQGKSIGALASTANVNQIQGISCSFCEGDHHYNNCPGNPESVYYLGNPQ
        IETYYKGLD+ATRLVIDAS N  LL KPYA+A NILERISS+NHSWS+ RA++GKS   L  + +   +                      S   +    
Subjt:  IETYYKGLDDATRLVIDASANEPLLGKPYAEAFNILERISSNNHSWSNPRAVQGKSIGALASTANVNQIQGISCSFCEGDHHYNNCPGNPESVYYLGNPQ

Query:  NNINNSYLNTYNPGWRNHPNFSWSGNQGGHNAGTSNAPAFQQK----------------------------LMKQYMANNDATVQSQATSLRNLELLVGQ
        NN N SY NTYNP  RNHPNF WSGNQGGHN G SNAP FQQK                            +MKQYMANNDATVQSQA SLRNLEL VGQ
Subjt:  NNINNSYLNTYNPGWRNHPNFSWSGNQGGHNAGTSNAPAFQQK----------------------------LMKQYMANNDATVQSQATSLRNLELLVGQ

Query:  LATDLKSRPVGTLPSDTEVPKRDDKEQCKALTLRSGKALPPAHPNAPASIKEPTQVDQGETQSEQGSESAKVVVPQTDNQL
        LA DLKSRPVG LPSDTEVPKRD KEQC ALTLRSGKALPP HPNAP   KEP Q+ QGE QSEQ SE A+VVVP    Q+
Subjt:  LATDLKSRPVGTLPSDTEVPKRDDKEQCKALTLRSGKALPPAHPNAPASIKEPTQVDQGETQSEQGSESAKVVVPQTDNQL

A0A6J1DXK5 uncharacterized protein LOC1110255002.7e-6451.86Show/hide
Query:  STFYNFNPVIIEPEIEAFKFELKPVTFQMLQ---TIETYYKGLDDATRLVIDASANEPLLGKPYAEAFNILERISSNNHSWSNPRAVQGK----------
        + F  F    +    E FK  ++   +Q +     I+TYY GLDDATRLVIDASAN  LL KPYAEAFNILERISSNN SWS+PRA+ GK          
Subjt:  STFYNFNPVIIEPEIEAFKFELKPVTFQMLQ---TIETYYKGLDDATRLVIDASANEPLLGKPYAEAFNILERISSNNHSWSNPRAVQGK----------

Query:  -----------------------SIGALASTANVNQIQGISCSFCEGDHHYNNCPGNPESVYYLGNPQNNINNSYLNTYNPGWRNHPNFSWSGNQGGHNA
                               ++GA A  ANV+ IQGISCSFC G++ YNNCPGNPESV+YLGN QNN NN Y              +W+G       
Subjt:  -----------------------SIGALASTANVNQIQGISCSFCEGDHHYNNCPGNPESVYYLGNPQNNINNSYLNTYNPGWRNHPNFSWSGNQGGHNA

Query:  GTSNAPAFQQKLMKQYMANNDATVQSQATSLRNLELLVGQLATDLKSRPVGTLPSDTEVPKRDDKEQCKALTLRSGKALPPAHPNAPASIKEPTQ
         T      +++ M +YM NND TVQSQA SLRNLE+ VGQLATDLKS+P G LPSD +VPKRD KEQC ALTLRSGK LP AHPNA    KE  Q
Subjt:  GTSNAPAFQQKLMKQYMANNDATVQSQATSLRNLELLVGQLATDLKSRPVGTLPSDTEVPKRDDKEQCKALTLRSGKALPPAHPNAPASIKEPTQ

A0A6J1E1F3 uncharacterized protein LOC1110250656.8e-6062.56Show/hide
Query:  IETYYKGLDDATRLVID-ASANEPLLGKPYAEAFNILERISSNNHSWSNPRAVQGKSIGALASTANVNQIQGISCSFCEGDHHYNNCPGNPESVYYLGNP
        IETYYK L+DATRL    A   +   G   +E++  L     N         +Q  S+GAL  TANVNQIQGISCSFCEGDHHYNNCPGNPESVYYLGNP
Subjt:  IETYYKGLDDATRLVID-ASANEPLLGKPYAEAFNILERISSNNHSWSNPRAVQGKSIGALASTANVNQIQGISCSFCEGDHHYNNCPGNPESVYYLGNP

Query:  QNNINNSYLNTYNPGWRNHPNFSWSGNQGGHNAGTSNAPAFQ----------------------------QKLMKQYMANNDATVQSQATSLRNLELLVG
        QNN NN Y NTYNPGWRNHPNFSWSG+QGGHNAGTS+APAFQ                            +KLMKQYMANNDATVQSQATSLRNL+L VG
Subjt:  QNNINNSYLNTYNPGWRNHPNFSWSGNQGGHNAGTSNAPAFQ----------------------------QKLMKQYMANNDATVQSQATSLRNLELLVG

Query:  QLATDLKSRPV
        QLATDLKS+P+
Subjt:  QLATDLKSRPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGAATAAATCCGCCAGTTCAACCTAATGCGCCTATAAGACCAAATGTGAGAATAGAGGAAATAGTAGATAGGGTTCCTGTCGCTACTCACCCTGATGTAGCAGT
GCCCCCTTTCAACGTTGTACTCTTAGCAGACGACATCGACAAGGAAATCAGAGGATATGCAGCTTCGACATTCTACAACTTCAACCCAGTTATCATAGAGCCAGAAATTG
AAGCTTTCAAATTTGAGCTGAAACCAGTGACGTTTCAGATGCTCCAGACAATAGAGACATATTACAAAGGTCTGGATGATGCCACACGCTTAGTAATTGATGCATCCGCA
AATGAGCCTTTGCTAGGAAAACCCTATGCTGAAGCATTCAATATTTTGGAAAGAATATCATCAAACAATCACTCATGGTCTAATCCTAGAGCTGTTCAAGGAAAATCGAT
TGGAGCATTAGCTAGTACGGCTAATGTCAATCAAATTCAAGGGATTTCTTGTTCTTTCTGCGAGGGAGACCACCATTATAACAACTGCCCCGGAAATCCTGAGTCAGTTT
ATTATTTGGGGAACCCGCAGAATAATATAAACAATTCGTATTTGAACACGTACAATCCTGGCTGGAGGAATCACCCCAATTTTAGTTGGAGTGGCAATCAAGGAGGACAC
AATGCGGGAACATCCAATGCTCCAGCATTTCAGCAGAAGTTGATGAAGCAATACATGGCAAATAATGATGCCACTGTTCAAAGCCAAGCTACATCATTAAGGAACCTAGA
ATTGTTAGTAGGCCAGTTAGCTACGGATTTGAAGAGCAGACCGGTTGGAACATTGCCTAGCGATACAGAAGTGCCAAAAAGAGACGATAAGGAACAATGCAAGGCCCTCA
CTTTGCGAAGTGGGAAAGCATTACCTCCAGCGCACCCGAATGCTCCAGCATCGATCAAGGAACCTACTCAAGTTGACCAGGGAGAAACTCAATCAGAACAGGGCAGTGAG
TCAGCAAAAGTAGTTGTGCCTCAGACAGACAACCAATTAATCCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAGAATAAATCCGCCAGTTCAACCTAATGCGCCTATAAGACCAAATGTGAGAATAGAGGAAATAGTAGATAGGGTTCCTGTCGCTACTCACCCTGATGTAGCAGT
GCCCCCTTTCAACGTTGTACTCTTAGCAGACGACATCGACAAGGAAATCAGAGGATATGCAGCTTCGACATTCTACAACTTCAACCCAGTTATCATAGAGCCAGAAATTG
AAGCTTTCAAATTTGAGCTGAAACCAGTGACGTTTCAGATGCTCCAGACAATAGAGACATATTACAAAGGTCTGGATGATGCCACACGCTTAGTAATTGATGCATCCGCA
AATGAGCCTTTGCTAGGAAAACCCTATGCTGAAGCATTCAATATTTTGGAAAGAATATCATCAAACAATCACTCATGGTCTAATCCTAGAGCTGTTCAAGGAAAATCGAT
TGGAGCATTAGCTAGTACGGCTAATGTCAATCAAATTCAAGGGATTTCTTGTTCTTTCTGCGAGGGAGACCACCATTATAACAACTGCCCCGGAAATCCTGAGTCAGTTT
ATTATTTGGGGAACCCGCAGAATAATATAAACAATTCGTATTTGAACACGTACAATCCTGGCTGGAGGAATCACCCCAATTTTAGTTGGAGTGGCAATCAAGGAGGACAC
AATGCGGGAACATCCAATGCTCCAGCATTTCAGCAGAAGTTGATGAAGCAATACATGGCAAATAATGATGCCACTGTTCAAAGCCAAGCTACATCATTAAGGAACCTAGA
ATTGTTAGTAGGCCAGTTAGCTACGGATTTGAAGAGCAGACCGGTTGGAACATTGCCTAGCGATACAGAAGTGCCAAAAAGAGACGATAAGGAACAATGCAAGGCCCTCA
CTTTGCGAAGTGGGAAAGCATTACCTCCAGCGCACCCGAATGCTCCAGCATCGATCAAGGAACCTACTCAAGTTGACCAGGGAGAAACTCAATCAGAACAGGGCAGTGAG
TCAGCAAAAGTAGTTGTGCCTCAGACAGACAACCAATTAATCCACTAA
Protein sequenceShow/hide protein sequence
MDRINPPVQPNAPIRPNVRIEEIVDRVPVATHPDVAVPPFNVVLLADDIDKEIRGYAASTFYNFNPVIIEPEIEAFKFELKPVTFQMLQTIETYYKGLDDATRLVIDASA
NEPLLGKPYAEAFNILERISSNNHSWSNPRAVQGKSIGALASTANVNQIQGISCSFCEGDHHYNNCPGNPESVYYLGNPQNNINNSYLNTYNPGWRNHPNFSWSGNQGGH
NAGTSNAPAFQQKLMKQYMANNDATVQSQATSLRNLELLVGQLATDLKSRPVGTLPSDTEVPKRDDKEQCKALTLRSGKALPPAHPNAPASIKEPTQVDQGETQSEQGSE
SAKVVVPQTDNQLIH