; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g25860 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g25860
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:19317046..19321363
RNA-Seq ExpressionMoc09g25860
SyntenyMoc09g25860
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5759684.1 putative RNA-directed DNA polymerase [Helianthus annuus]1.1e-3664.57Show/hide
Query:  IASASKNIIVELNKGEMLNGDNYEILAMKIQYVLEEQEALEVLSNVLTDPEEGNSAQYKRDKEAYEVWKKKDSLARITLLSSMDKDVMREFRSYDLAQDM
        +ASASKNI+ E+NKG  LNGDNYEI +MKIQYVLEEQEA EVL+++L +P EGN+AQ+KRD+E Y  WK+K++LARITLLSSMD D+MR+F  YDLA+DM
Subjt:  IASASKNIIVELNKGEMLNGDNYEILAMKIQYVLEEQEALEVLSNVLTDPEEGNSAQYKRDKEAYEVWKKKDSLARITLLSSMDKDVMREFRSYDLAQDM

Query:  WDALKLKFGETSITNVSQLIFMLDTIV
        W AL  KFG TSIT +  L    D  +
Subjt:  WDALKLKFGETSITNVSQLIFMLDTIV

KAF5799909.1 hypothetical protein HanXRQr2_Chr07g0309911 [Helianthus annuus]1.1e-3664.57Show/hide
Query:  IASASKNIIVELNKGEMLNGDNYEILAMKIQYVLEEQEALEVLSNVLTDPEEGNSAQYKRDKEAYEVWKKKDSLARITLLSSMDKDVMREFRSYDLAQDM
        +ASASKNI+ E+NKG  LNGDNYEI +MKIQYVLEEQEA EVL+++L +P EGN+AQ+KRD+E Y  WK+K++LARITLLSSMD D+MR+F  YDLA+DM
Subjt:  IASASKNIIVELNKGEMLNGDNYEILAMKIQYVLEEQEALEVLSNVLTDPEEGNSAQYKRDKEAYEVWKKKDSLARITLLSSMDKDVMREFRSYDLAQDM

Query:  WDALKLKFGETSITNVSQLIFMLDTIV
        W AL  KFG TSIT +  L    D  +
Subjt:  WDALKLKFGETSITNVSQLIFMLDTIV

MBW0583023.1 hypothetical protein [Austropuccinia psidii MF-1]3.6e-3562.4Show/hide
Query:  IASASKNIIVELNKGEMLNGDNYEILAMKIQYVLEEQEALEVLSNVLTDPEEGNSAQYKRDKEAYEVWKKKDSLARITLLSSMDKDVMREFRSYDLAQDM
        +ASA+K+I+ ELNKGE LNGDNYEI  MKIQYVLEEQEALE L+  + +PEEG +AQ+KRDKEA+  WK+K+SLARITLLSSM+ DVMREF+ ++ A++M
Subjt:  IASASKNIIVELNKGEMLNGDNYEILAMKIQYVLEEQEALEVLSNVLTDPEEGNSAQYKRDKEAYEVWKKKDSLARITLLSSMDKDVMREFRSYDLAQDM

Query:  WDALKLKFGETSITNVSQLIFMLDT
        W+AL  +FG  S+T + QL    D+
Subjt:  WDALKLKFGETSITNVSQLIFMLDT

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]3.0e-3740.66Show/hide
Query:  IKTRDLYLEKGFV---EADMPQ--FVKEGATRLKWEHFYA-PLMPVLPEIVREFYANFDPDRVGHTTVREVEIDWTPERINKLFKLPNIPEAEFNSMIQQ
        I+ R L  EKGFV      M Q  F+ +  T+  W+ F A P  P++P +VREFYAN          VR V++ W+ E IN +F L + P  E +  I+ 
Subjt:  IKTRDLYLEKGFV---EADMPQ--FVKEGATRLKWEHFYA-PLMPVLPEIVREFYANFDPDRVGHTTVREVEIDWTPERINKLFKLPNIPEAEFNSMIQQ

Query:  PFVRELENALHLVGIEGVVWQVTAKGAQSMKSCQLTGEANVWLYFVKSRVMPTTHDSSVTKDRVLLLAYILEGRSIDVGQLIHREITQCATKKNGRLFFP
            +L   L  V + G  W V+A+GA +     LT  A VW +F+KS ++PTTH  +V+KDR+LLL  +L G+SI+VG++IH EI  CA +K G LFFP
Subjt:  PFVRELENALHLVGIEGVVWQVTAKGAQSMKSCQLTGEANVWLYFVKSRVMPTTHDSSVTKDRVLLLAYILEGRSIDVGQLIHREITQCATKKNGRLFFP

Query:  SLITKLYLHRDVPILYDEEPFKDKLVIDKSTVERLMNQDPT
        SLIT+L  +   P L +EE   +   ID   V R+  + PT
Subjt:  SLITKLYLHRDVPILYDEEPFKDKLVIDKSTVERLMNQDPT

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]4.6e-3841.49Show/hide
Query:  IKTRDLYLEKGFV---EADMPQ--FVKEGATRLKWEHFYA-PLMPVLPEIVREFYANFDPDRVGHTTVREVEIDWTPERINKLFKLPNIPEAEFNSMIQQ
        I+ R L  EKGFV      M Q  F+ +  T+  W+ F A P  P++P +VREFYAN          VR V++ W+ E IN +F L + P  E +  IQ 
Subjt:  IKTRDLYLEKGFV---EADMPQ--FVKEGATRLKWEHFYA-PLMPVLPEIVREFYANFDPDRVGHTTVREVEIDWTPERINKLFKLPNIPEAEFNSMIQQ

Query:  PFVRELENALHLVGIEGVVWQVTAKGAQSMKSCQLTGEANVWLYFVKSRVMPTTHDSSVTKDRVLLLAYILEGRSIDVGQLIHREITQCATKKNGRLFFP
           ++L   L  V   G  W V+A+GA +     LT  A VW +F+KSR++PTTH  +V+KDR+LLL  +L G+SI+VG++IH EI  CA +K G LFFP
Subjt:  PFVRELENALHLVGIEGVVWQVTAKGAQSMKSCQLTGEANVWLYFVKSRVMPTTHDSSVTKDRVLLLAYILEGRSIDVGQLIHREITQCATKKNGRLFFP

Query:  SLITKLYLHRDVPILYDEEPFKDKLVIDKSTVERLMNQDPT
        SLIT+L  +   P L +EE   +   ID   V R+  + PT
Subjt:  SLITKLYLHRDVPILYDEEPFKDKLVIDKSTVERLMNQDPT

TrEMBL top hitse value%identityAlignment
A0A1U7Y748 uncharacterized protein LOC1042414021.8e-3254.4Show/hide
Query:  IASASKNIIVELNKGEMLNGDNYEILAMKIQYVLEEQEALEVLSNVLTDPEEGNSAQYKRDKEAYEVWKKKDSLARITLLSSMDKDVMREFRSYDLAQDM
        + +ASKNI+ ELNKG  LNGDNYE  ++K+QYVLEEQEALE ++NV+ +PEEGN+AQ++R+++AY+ WKKK+S+ARITLLS++D D++REF+ +  A D+
Subjt:  IASASKNIIVELNKGEMLNGDNYEILAMKIQYVLEEQEALEVLSNVLTDPEEGNSAQYKRDKEAYEVWKKKDSLARITLLSSMDKDVMREFRSYDLAQDM

Query:  WDALKLKFGETSITNVSQLIFMLDT
        W+ L+ +FG  S T +  L    D+
Subjt:  WDALKLKFGETSITNVSQLIFMLDT

A0A251RYZ8 Putative zinc finger, CCHC-type1.8e-3263.79Show/hide
Query:  LNKGEMLNGDNYEILAMKIQYVLEEQEALEVLSNVLTDPEEGNSAQYKRDKEAYEVWKKKDSLARITLLSSMDKDVMREFRSYDLAQDMWDALKLKFGET
        +NKG  LNGDNYEI +MKIQYVLEEQEA EVL+++L +P EGN+AQ+KRD+E Y  WK+K++LARITLLSSMD D+MR+F  YDLA+DMW AL  KFG T
Subjt:  LNKGEMLNGDNYEILAMKIQYVLEEQEALEVLSNVLTDPEEGNSAQYKRDKEAYEVWKKKDSLARITLLSSMDKDVMREFRSYDLAQDMWDALKLKFGET

Query:  SITNVSQLIFMLDTIV
        SIT +  L    D  +
Subjt:  SITNVSQLIFMLDTIV

A0A2P5AGA5 Uncharacterized protein (Fragment)1.4e-3740.66Show/hide
Query:  IKTRDLYLEKGFV---EADMPQ--FVKEGATRLKWEHFYA-PLMPVLPEIVREFYANFDPDRVGHTTVREVEIDWTPERINKLFKLPNIPEAEFNSMIQQ
        I+ R L  EKGFV      M Q  F+ +  T+  W+ F A P  P++P +VREFYAN          VR V++ W+ E IN +F L + P  E +  I+ 
Subjt:  IKTRDLYLEKGFV---EADMPQ--FVKEGATRLKWEHFYA-PLMPVLPEIVREFYANFDPDRVGHTTVREVEIDWTPERINKLFKLPNIPEAEFNSMIQQ

Query:  PFVRELENALHLVGIEGVVWQVTAKGAQSMKSCQLTGEANVWLYFVKSRVMPTTHDSSVTKDRVLLLAYILEGRSIDVGQLIHREITQCATKKNGRLFFP
            +L   L  V + G  W V+A+GA +     LT  A VW +F+KS ++PTTH  +V+KDR+LLL  +L G+SI+VG++IH EI  CA +K G LFFP
Subjt:  PFVRELENALHLVGIEGVVWQVTAKGAQSMKSCQLTGEANVWLYFVKSRVMPTTHDSSVTKDRVLLLAYILEGRSIDVGQLIHREITQCATKKNGRLFFP

Query:  SLITKLYLHRDVPILYDEEPFKDKLVIDKSTVERLMNQDPT
        SLIT+L  +   P L +EE   +   ID   V R+  + PT
Subjt:  SLITKLYLHRDVPILYDEEPFKDKLVIDKSTVERLMNQDPT

A0A2P5BCG4 Uncharacterized protein (Fragment)2.2e-3841.49Show/hide
Query:  IKTRDLYLEKGFV---EADMPQ--FVKEGATRLKWEHFYA-PLMPVLPEIVREFYANFDPDRVGHTTVREVEIDWTPERINKLFKLPNIPEAEFNSMIQQ
        I+ R L  EKGFV      M Q  F+ +  T+  W+ F A P  P++P +VREFYAN          VR V++ W+ E IN +F L + P  E +  IQ 
Subjt:  IKTRDLYLEKGFV---EADMPQ--FVKEGATRLKWEHFYA-PLMPVLPEIVREFYANFDPDRVGHTTVREVEIDWTPERINKLFKLPNIPEAEFNSMIQQ

Query:  PFVRELENALHLVGIEGVVWQVTAKGAQSMKSCQLTGEANVWLYFVKSRVMPTTHDSSVTKDRVLLLAYILEGRSIDVGQLIHREITQCATKKNGRLFFP
           ++L   L  V   G  W V+A+GA +     LT  A VW +F+KSR++PTTH  +V+KDR+LLL  +L G+SI+VG++IH EI  CA +K G LFFP
Subjt:  PFVRELENALHLVGIEGVVWQVTAKGAQSMKSCQLTGEANVWLYFVKSRVMPTTHDSSVTKDRVLLLAYILEGRSIDVGQLIHREITQCATKKNGRLFFP

Query:  SLITKLYLHRDVPILYDEEPFKDKLVIDKSTVERLMNQDPT
        SLIT+L  +   P L +EE   +   ID   V R+  + PT
Subjt:  SLITKLYLHRDVPILYDEEPFKDKLVIDKSTVERLMNQDPT

A0A2P5DXM3 Uncharacterized protein4.8e-3342.86Show/hide
Query:  FYAPLMPVLPEIVREFYANFDPDRVGHTTVREVEIDWTPERINKLFKLPNIPEAEFNSMIQQPFVRELENALHLVGIEGVVWQVTAKGAQSMKSCQLTGE
        F A  +  LP +VREFYAN          VR V++ W+ E IN +F L + P  E +  I+     EL   L  V   G  W V+A+GA +     LT  
Subjt:  FYAPLMPVLPEIVREFYANFDPDRVGHTTVREVEIDWTPERINKLFKLPNIPEAEFNSMIQQPFVRELENALHLVGIEGVVWQVTAKGAQSMKSCQLTGE

Query:  ANVWLYFVKSRVMPTTHDSSVTKDRVLLLAYILEGRSIDVGQLIHREITQCATKKNGRLFFPSLITKLYLHRDVPILYDEEPFKDKLVIDKSTVERLMNQ
        A VW +F+KSR++PTTH   V+KDR+LLL  +L G+SI+VG++IH EI  CA +K G LFFPSLIT+L   R+ P L +EE   +   ID   V R+  +
Subjt:  ANVWLYFVKSRVMPTTHDSSVTKDRVLLLAYILEGRSIDVGQLIHREITQCATKKNGRLFFPSLITKLYLHRDVPILYDEEPFKDKLVIDKSTVERLMNQ

Query:  DPT
         PT
Subjt:  DPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTCTGTTTCCCAGATTACTTTAACCCCGAGTTCAGATAAGTGCATCACGGTAGTCCCTACGAGCCAGGCGGCATTCCAGAAGTTTGTCGACTCGGAAGTGAGGGC
GAGCTACAGGGTCATCAAGACAAGGGACTTGTACTTGGAAAAAGGGTTTGTGGAGGCGGACATGCCCCAATTCGTGAAGGAGGGAGCCACGCGGTTAAAATGGGAGCATT
TCTATGCTCCACTTATGCCGGTTTTGCCGGAGATCGTGAGGGAATTCTACGCCAACTTTGACCCCGACAGAGTGGGACACACAACGGTGCGGGAGGTTGAAATCGATTGG
ACGCCGGAAAGGATCAACAAACTGTTTAAGCTGCCCAACATTCCTGAAGCTGAGTTCAATTCAATGATCCAGCAGCCCTTCGTGCGGGAGCTTGAAAATGCCCTACATCT
AGTAGGCATTGAGGGTGTTGTATGGCAAGTGACGGCCAAGGGAGCCCAATCAATGAAATCTTGTCAACTCACGGGGGAAGCCAACGTTTGGCTCTACTTCGTTAAGAGTC
GGGTCATGCCTACCACGCATGATTCGTCTGTTACAAAGGACAGAGTCCTTCTGTTGGCCTATATTTTGGAAGGTCGCTCCATTGATGTCGGACAGCTCATCCATCGAGAG
ATCACGCAGTGCGCAACAAAAAAAAACGGCCGTCTGTTTTTCCCGAGCCTTATCACCAAACTCTACCTTCACAGAGATGTTCCCATCTTGTATGACGAAGAGCCCTTCAA
GGACAAATTGGTGATAGATAAAAGCACGGTGGAAAGGCTGATGAACCAGGACCCTACGCGTCGTGGAGCTGTGCAGAATGTGGCCGAGTTTGGTTTTTTGGGGGTGATAG
TGGAAAAGTTGACAGATAAGTCACCCTTACTGCCACTCGACAGAACCGTACATGAGATTTTCACCTCATACGGCTCCTCGTTCAATTCTTTCGAAGTCATTGGATCCTTT
TCCTCGTTCGAGAATCTCCTCCCTTCTTCCATTCCGTCCCGAAGAGTGACCGGGACCAATTCACCCCGTCAGCATCGCTGTGCCAACCGTCTGAAGGTATTGCTGGAGCA
ATCCGGCAGCTCTGAAGAGGAAGATCAGCCTATGAGCGACTCTTCAGAGGAAGAAGGAAGTGAAGAAGAAATAGACTTTGAAAATATAGCATCTGCTTCAAAAAATATAA
TTGTTGAATTGAACAAAGGGGAGATGCTTAATGGGGATAACTATGAAATTTTGGCAATGAAAATTCAGTATGTACTGGAAGAGCAAGAAGCTCTAGAAGTGTTAAGCAAT
GTGTTGACTGATCCTGAGGAGGGCAATAGTGCTCAATACAAGAGGGACAAAGAGGCTTATGAAGTCTGGAAGAAGAAAGACTCACTTGCTCGGATAACGTTGCTGAGCAG
CATGGACAAAGATGTCATGCGTGAGTTTCGCTCTTATGATCTTGCCCAAGACATGTGGGATGCGTTAAAGTTGAAATTTGGTGAAACTTCTATCACCAATGTCAGTCAAC
TTATCTTCATGCTTGACACTATTGTGATTAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCTCTGTTTCCCAGATTACTTTAACCCCGAGTTCAGATAAGTGCATCACGGTAGTCCCTACGAGCCAGGCGGCATTCCAGAAGTTTGTCGACTCGGAAGTGAGGGC
GAGCTACAGGGTCATCAAGACAAGGGACTTGTACTTGGAAAAAGGGTTTGTGGAGGCGGACATGCCCCAATTCGTGAAGGAGGGAGCCACGCGGTTAAAATGGGAGCATT
TCTATGCTCCACTTATGCCGGTTTTGCCGGAGATCGTGAGGGAATTCTACGCCAACTTTGACCCCGACAGAGTGGGACACACAACGGTGCGGGAGGTTGAAATCGATTGG
ACGCCGGAAAGGATCAACAAACTGTTTAAGCTGCCCAACATTCCTGAAGCTGAGTTCAATTCAATGATCCAGCAGCCCTTCGTGCGGGAGCTTGAAAATGCCCTACATCT
AGTAGGCATTGAGGGTGTTGTATGGCAAGTGACGGCCAAGGGAGCCCAATCAATGAAATCTTGTCAACTCACGGGGGAAGCCAACGTTTGGCTCTACTTCGTTAAGAGTC
GGGTCATGCCTACCACGCATGATTCGTCTGTTACAAAGGACAGAGTCCTTCTGTTGGCCTATATTTTGGAAGGTCGCTCCATTGATGTCGGACAGCTCATCCATCGAGAG
ATCACGCAGTGCGCAACAAAAAAAAACGGCCGTCTGTTTTTCCCGAGCCTTATCACCAAACTCTACCTTCACAGAGATGTTCCCATCTTGTATGACGAAGAGCCCTTCAA
GGACAAATTGGTGATAGATAAAAGCACGGTGGAAAGGCTGATGAACCAGGACCCTACGCGTCGTGGAGCTGTGCAGAATGTGGCCGAGTTTGGTTTTTTGGGGGTGATAG
TGGAAAAGTTGACAGATAAGTCACCCTTACTGCCACTCGACAGAACCGTACATGAGATTTTCACCTCATACGGCTCCTCGTTCAATTCTTTCGAAGTCATTGGATCCTTT
TCCTCGTTCGAGAATCTCCTCCCTTCTTCCATTCCGTCCCGAAGAGTGACCGGGACCAATTCACCCCGTCAGCATCGCTGTGCCAACCGTCTGAAGGTATTGCTGGAGCA
ATCCGGCAGCTCTGAAGAGGAAGATCAGCCTATGAGCGACTCTTCAGAGGAAGAAGGAAGTGAAGAAGAAATAGACTTTGAAAATATAGCATCTGCTTCAAAAAATATAA
TTGTTGAATTGAACAAAGGGGAGATGCTTAATGGGGATAACTATGAAATTTTGGCAATGAAAATTCAGTATGTACTGGAAGAGCAAGAAGCTCTAGAAGTGTTAAGCAAT
GTGTTGACTGATCCTGAGGAGGGCAATAGTGCTCAATACAAGAGGGACAAAGAGGCTTATGAAGTCTGGAAGAAGAAAGACTCACTTGCTCGGATAACGTTGCTGAGCAG
CATGGACAAAGATGTCATGCGTGAGTTTCGCTCTTATGATCTTGCCCAAGACATGTGGGATGCGTTAAAGTTGAAATTTGGTGAAACTTCTATCACCAATGTCAGTCAAC
TTATCTTCATGCTTGACACTATTGTGATTAGTTAG
Protein sequenceShow/hide protein sequence
MVSVSQITLTPSSDKCITVVPTSQAAFQKFVDSEVRASYRVIKTRDLYLEKGFVEADMPQFVKEGATRLKWEHFYAPLMPVLPEIVREFYANFDPDRVGHTTVREVEIDW
TPERINKLFKLPNIPEAEFNSMIQQPFVRELENALHLVGIEGVVWQVTAKGAQSMKSCQLTGEANVWLYFVKSRVMPTTHDSSVTKDRVLLLAYILEGRSIDVGQLIHRE
ITQCATKKNGRLFFPSLITKLYLHRDVPILYDEEPFKDKLVIDKSTVERLMNQDPTRRGAVQNVAEFGFLGVIVEKLTDKSPLLPLDRTVHEIFTSYGSSFNSFEVIGSF
SSFENLLPSSIPSRRVTGTNSPRQHRCANRLKVLLEQSGSSEEEDQPMSDSSEEEGSEEEIDFENIASASKNIIVELNKGEMLNGDNYEILAMKIQYVLEEQEALEVLSN
VLTDPEEGNSAQYKRDKEAYEVWKKKDSLARITLLSSMDKDVMREFRSYDLAQDMWDALKLKFGETSITNVSQLIFMLDTIVIS