; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g26640 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g26640
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr9:19848330..19855335
RNA-Seq ExpressionMoc09g26640
SyntenyMoc09g26640
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065480.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]8.7e-1944.53Show/hide
Query:  IVASWIINSVSKEIVASIVYIGSAKDIWDKLNGRFQQSNGPQIFKLRKELVTSVQ------------------------------------------EYV
        I+ASWI+NSVSKEI ASI+YIGS K+IWD+L  RF+QSNGP I++LRKE VT  Q                                          EY+
Subjt:  IVASWIINSVSKEIVASIVYIGSAKDIWDKLNGRFQQSNGPQIFKLRKELVTSVQ------------------------------------------EYV

Query:  RIFIMGHNESYATIRAQILLMDPIPPINKTDSTSIAD
          F+MG N+SYA +RAQILLM P+P IN   S  I +
Subjt:  RIFIMGHNESYATIRAQILLMDPIPPINKTDSTSIAD

XP_022145891.1 uncharacterized protein LOC111015239 [Momordica charantia]4.4e-2350.36Show/hide
Query:  IVASWIINSVSKEIVASIVYIGSAKDIWDKLNGRFQQSNGPQIFKLRKELVTSVQ------------------------------------------EYV
        I+ SWIINSVSKEI ASI+Y GSAKDIWD+L  RFQQS+ P+IF+LRKELVT++Q                                          EYV
Subjt:  IVASWIINSVSKEIVASIVYIGSAKDIWDKLNGRFQQSNGPQIFKLRKELVTSVQ------------------------------------------EYV

Query:  RIFIMGHNESYATIRAQILLMDPIPPINKTDSTSIAD
          F+MG NESYA IRAQILLMDPIPP+NK  S  I +
Subjt:  RIFIMGHNESYATIRAQILLMDPIPPINKTDSTSIAD

XP_022152155.1 cinnamoyl-CoA reductase-like SNL6 [Momordica charantia]2.1e-3672.66Show/hide
Query:  VVATGHKRSSVYVSEFGVAKGSLRQMMHRVAADSSGRDFRGSTAMMARTDQKNLPSAQVKQLRSTEKGNKNLIGHRVHISAVRRSGELVKSHRRISALKG
        VVATGHKRS VYVSEF VAKGSLRQ MH+V A  S R  R   A+MA+TDQKNLPS QVKQLRST+KGN+NLIGHRVH SAVR  GELVKSHRRISALKG
Subjt:  VVATGHKRSSVYVSEFGVAKGSLRQMMHRVAADSSGRDFRGSTAMMARTDQKNLPSAQVKQLRSTEKGNKNLIGHRVHISAVRRSGELVKSHRRISALKG

Query:  AGSVSSVATDLGGSAKVFNFPTIVASWI
         GS+SSVAT L GSAK     +  + WI
Subjt:  AGSVSSVATDLGGSAKVFNFPTIVASWI

XP_022155284.1 uncharacterized protein LOC111022420 [Momordica charantia]2.5e-1844.62Show/hide
Query:  IVASWIINSVSKEIVASIVYIGSAKDIWDKLNGRFQQSNGPQIFKLRKELVTSV-----------------------------------QEYVRIFIMGH
        ++  WI+NSVS++I AS+VY  SA DIW++L  RFQQSNGP+I++LRKE VT                                      EYV +F+MG 
Subjt:  IVASWIINSVSKEIVASIVYIGSAKDIWDKLNGRFQQSNGPQIFKLRKELVTSV-----------------------------------QEYVRIFIMGH

Query:  NESYATIRAQILLMDPIPPINKTDSTSIAD
        NESYA +RAQIL MDP+PPINK  S  I +
Subjt:  NESYATIRAQILLMDPIPPINKTDSTSIAD

XP_022157059.1 uncharacterized protein LOC111023870 [Momordica charantia]2.8e-3376.64Show/hide
Query:  GSLRQMMHRVAADSSGRDFRGSTAMMARTDQKNLPSAQVKQLRSTEKGNKNLIGHRVHISAVRRSGELVKSHRRISALKGAGSVSSVATDLGGSAKVFNF
        GSLRQ MHRVA DSSGRD +G T +MARTDQKNLPSA VKQLRSTEKGN+NLIGH+VH SAVRRSGELVKSHRRISA KG G VSSV TDLGGSAK    
Subjt:  GSLRQMMHRVAADSSGRDFRGSTAMMARTDQKNLPSAQVKQLRSTEKGNKNLIGHRVHISAVRRSGELVKSHRRISALKGAGSVSSVATDLGGSAKVFNF

Query:  PTIVASW
         +    W
Subjt:  PTIVASW

TrEMBL top hitse value%identityAlignment
A0A5A7VE66 Cysteine-rich RLK (Receptor-like protein kinase) 84.2e-1944.53Show/hide
Query:  IVASWIINSVSKEIVASIVYIGSAKDIWDKLNGRFQQSNGPQIFKLRKELVTSVQ------------------------------------------EYV
        I+ASWI+NSVSKEI ASI+YIGS K+IWD+L  RF+QSNGP I++LRKE VT  Q                                          EY+
Subjt:  IVASWIINSVSKEIVASIVYIGSAKDIWDKLNGRFQQSNGPQIFKLRKELVTSVQ------------------------------------------EYV

Query:  RIFIMGHNESYATIRAQILLMDPIPPINKTDSTSIAD
          F+MG N+SYA +RAQILLM P+P IN   S  I +
Subjt:  RIFIMGHNESYATIRAQILLMDPIPPINKTDSTSIAD

A0A6J1CXR2 uncharacterized protein LOC1110152392.1e-2350.36Show/hide
Query:  IVASWIINSVSKEIVASIVYIGSAKDIWDKLNGRFQQSNGPQIFKLRKELVTSVQ------------------------------------------EYV
        I+ SWIINSVSKEI ASI+Y GSAKDIWD+L  RFQQS+ P+IF+LRKELVT++Q                                          EYV
Subjt:  IVASWIINSVSKEIVASIVYIGSAKDIWDKLNGRFQQSNGPQIFKLRKELVTSVQ------------------------------------------EYV

Query:  RIFIMGHNESYATIRAQILLMDPIPPINKTDSTSIAD
          F+MG NESYA IRAQILLMDPIPP+NK  S  I +
Subjt:  RIFIMGHNESYATIRAQILLMDPIPPINKTDSTSIAD

A0A6J1DD48 cinnamoyl-CoA reductase-like SNL69.9e-3772.66Show/hide
Query:  VVATGHKRSSVYVSEFGVAKGSLRQMMHRVAADSSGRDFRGSTAMMARTDQKNLPSAQVKQLRSTEKGNKNLIGHRVHISAVRRSGELVKSHRRISALKG
        VVATGHKRS VYVSEF VAKGSLRQ MH+V A  S R  R   A+MA+TDQKNLPS QVKQLRST+KGN+NLIGHRVH SAVR  GELVKSHRRISALKG
Subjt:  VVATGHKRSSVYVSEFGVAKGSLRQMMHRVAADSSGRDFRGSTAMMARTDQKNLPSAQVKQLRSTEKGNKNLIGHRVHISAVRRSGELVKSHRRISALKG

Query:  AGSVSSVATDLGGSAKVFNFPTIVASWI
         GS+SSVAT L GSAK     +  + WI
Subjt:  AGSVSSVATDLGGSAKVFNFPTIVASWI

A0A6J1DPT8 uncharacterized protein LOC1110224201.2e-1844.62Show/hide
Query:  IVASWIINSVSKEIVASIVYIGSAKDIWDKLNGRFQQSNGPQIFKLRKELVTSV-----------------------------------QEYVRIFIMGH
        ++  WI+NSVS++I AS+VY  SA DIW++L  RFQQSNGP+I++LRKE VT                                      EYV +F+MG 
Subjt:  IVASWIINSVSKEIVASIVYIGSAKDIWDKLNGRFQQSNGPQIFKLRKELVTSV-----------------------------------QEYVRIFIMGH

Query:  NESYATIRAQILLMDPIPPINKTDSTSIAD
        NESYA +RAQIL MDP+PPINK  S  I +
Subjt:  NESYATIRAQILLMDPIPPINKTDSTSIAD

A0A6J1DVE9 uncharacterized protein LOC1110238701.3e-3376.64Show/hide
Query:  GSLRQMMHRVAADSSGRDFRGSTAMMARTDQKNLPSAQVKQLRSTEKGNKNLIGHRVHISAVRRSGELVKSHRRISALKGAGSVSSVATDLGGSAKVFNF
        GSLRQ MHRVA DSSGRD +G T +MARTDQKNLPSA VKQLRSTEKGN+NLIGH+VH SAVRRSGELVKSHRRISA KG G VSSV TDLGGSAK    
Subjt:  GSLRQMMHRVAADSSGRDFRGSTAMMARTDQKNLPSAQVKQLRSTEKGNKNLIGHRVHISAVRRSGELVKSHRRISALKGAGSVSSVATDLGGSAKVFNF

Query:  PTIVASW
         +    W
Subjt:  PTIVASW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCCCATACCATTAGATAGTCAAACCACCAGTGACCCAAACTCTCTTGAAGCACCACCCAACTGTGAACCTACTTCAATACAAAATGCTACTGAAGGTACT
GAAGGTAGAGAATTCTTTGATAGTCAAACCACAAATGTGAAGCAAACTGAAAATGAAGGAACATTGTGCTGTCCAAAACAGAGGAAAACAGGGCTGGTGGTCTTC
AATTTCCCAACAAATGGTATCAGAGCTATATACCAGTGGGTGGTTGAGAAGGGGAACACTACTGCAAATGTTGTAACAGAAGAAGAACGGATTGAAGAGGTGGTG
GCAACAGGCCACAAGAGATCTTCTGTTTATGTGTCAGAGTTTGGGGTTGCCAAGGGTTCACTGAGACAGATGATGCACAGAGTAGCTGCAGATAGTTCAGGGCGA
GACTTTAGAGGATCAACAGCAATGATGGCCAGAACAGATCAGAAGAATCTGCCATCAGCTCAAGTAAAACAGTTGAGAAGTACAGAAAAGGGAAACAAGAATTTG
ATAGGCCATCGAGTTCATATCTCAGCTGTCAGACGTTCAGGCGAGCTGGTGAAGTCGCATAGGCGAATTAGTGCATTGAAGGGTGCGGGTTCTGTTTCTAGTGTG
GCAACAGACTTGGGTGGGAGCGCCAAGGTCTTCAATTTCCCAACAATTGTGGCATCATGGATTATAAATTCCGTTTCCAAAGAAATAGTCGCAAGCATCGTATAC
ATTGGTTCTGCCAAAGACATTTGGGATAAACTCAATGGGCGTTTTCAACAAAGCAATGGCCCACAGATATTTAAGCTTCGTAAGGAATTGGTTACCAGTGTACAA
GAGTACGTCAGGATCTTTATCATGGGCCATAACGAATCATATGCCACTATTAGGGCTCAAATTCTCCTCATGGATCCAATTCCTCCGATAAACAAGACTGATAGT
ACTTCAATTGCTGATTTTTTGTCTGAATTTATACTGCCTGCTTTTATATCCAAAGGGCCTTCATCTGCTACTTTGCCCACTCTTACTGCTACTGATCCTTTGGCT
GTTGCGCTTGTTCCCATTGCTGCTGATGTTGCTGGCTGTGAGTGTCCTACCATTGTTGCTTCAGATTCTGATCTTGCTACAACTCAACCTACTGACATTGTACCA
GTCATGCATATTATTGACCCAGCCATGCCTAATGTTGATCCAACTCTGTTTTATATTTCACCAGATTCTACTATTATACATGGTGTTGTACCAGATGCTCCTGTT
GGTCTGCCTTTTCGACCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCCCATACCATTAGATAGTCAAACCACCAGTGACCCAAACTCTCTTGAAGCACCACCCAACTGTGAACCTACTTCAATACAAAATGCTACTGAAGGTACT
GAAGGTAGAGAATTCTTTGATAGTCAAACCACAAATGTGAAGCAAACTGAAAATGAAGGAACATTGTGCTGTCCAAAACAGAGGAAAACAGGGCTGGTGGTCTTC
AATTTCCCAACAAATGGTATCAGAGCTATATACCAGTGGGTGGTTGAGAAGGGGAACACTACTGCAAATGTTGTAACAGAAGAAGAACGGATTGAAGAGGTGGTG
GCAACAGGCCACAAGAGATCTTCTGTTTATGTGTCAGAGTTTGGGGTTGCCAAGGGTTCACTGAGACAGATGATGCACAGAGTAGCTGCAGATAGTTCAGGGCGA
GACTTTAGAGGATCAACAGCAATGATGGCCAGAACAGATCAGAAGAATCTGCCATCAGCTCAAGTAAAACAGTTGAGAAGTACAGAAAAGGGAAACAAGAATTTG
ATAGGCCATCGAGTTCATATCTCAGCTGTCAGACGTTCAGGCGAGCTGGTGAAGTCGCATAGGCGAATTAGTGCATTGAAGGGTGCGGGTTCTGTTTCTAGTGTG
GCAACAGACTTGGGTGGGAGCGCCAAGGTCTTCAATTTCCCAACAATTGTGGCATCATGGATTATAAATTCCGTTTCCAAAGAAATAGTCGCAAGCATCGTATAC
ATTGGTTCTGCCAAAGACATTTGGGATAAACTCAATGGGCGTTTTCAACAAAGCAATGGCCCACAGATATTTAAGCTTCGTAAGGAATTGGTTACCAGTGTACAA
GAGTACGTCAGGATCTTTATCATGGGCCATAACGAATCATATGCCACTATTAGGGCTCAAATTCTCCTCATGGATCCAATTCCTCCGATAAACAAGACTGATAGT
ACTTCAATTGCTGATTTTTTGTCTGAATTTATACTGCCTGCTTTTATATCCAAAGGGCCTTCATCTGCTACTTTGCCCACTCTTACTGCTACTGATCCTTTGGCT
GTTGCGCTTGTTCCCATTGCTGCTGATGTTGCTGGCTGTGAGTGTCCTACCATTGTTGCTTCAGATTCTGATCTTGCTACAACTCAACCTACTGACATTGTACCA
GTCATGCATATTATTGACCCAGCCATGCCTAATGTTGATCCAACTCTGTTTTATATTTCACCAGATTCTACTATTATACATGGTGTTGTACCAGATGCTCCTGTT
GGTCTGCCTTTTCGACCTTAA
Protein sequenceShow/hide protein sequence
MSPIPLDSQTTSDPNSLEAPPNCEPTSIQNATEGTEGREFFDSQTTNVKQTENEGTLCCPKQRKTGLVVFNFPTNGIRAIYQWVVEKGNTTANVVTEEERIEEVV
ATGHKRSSVYVSEFGVAKGSLRQMMHRVAADSSGRDFRGSTAMMARTDQKNLPSAQVKQLRSTEKGNKNLIGHRVHISAVRRSGELVKSHRRISALKGAGSVSSV
ATDLGGSAKVFNFPTIVASWIINSVSKEIVASIVYIGSAKDIWDKLNGRFQQSNGPQIFKLRKELVTSVQEYVRIFIMGHNESYATIRAQILLMDPIPPINKTDS
TSIADFLSEFILPAFISKGPSSATLPTLTATDPLAVALVPIAADVAGCECPTIVASDSDLATTQPTDIVPVMHIIDPAMPNVDPTLFYISPDSTIIHGVVPDAPV
GLPFRP