; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g27280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g27280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr9:20430852..20431556
RNA-Seq ExpressionMoc09g27280
SyntenyMoc09g27280
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152362.1 uncharacterized protein LOC111020105 [Momordica charantia]6.3e-10484.12Show/hide
Query:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL
        +K +FD QV+AL+ RCE K  +FDDG+  ESPF SDILEA IPPKFKT TMKPYDGSKDPKDYVEVFEGLIDFQ  TDAIKC AF+IA TGSARLWYR+L
Subjt:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL

Query:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV
        PARSISTYSQLRKEFISQFSSRHYDRKT THLATIRQK+GETLREYVTRFQEEQLKV HCSDDSAMCYFLTGLADETLT+KLG++APATF EVLQK KKV
Subjt:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV

Query:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK
        IDGQELL+TK GRPEKQIDQK+ S EKRKA+SK
Subjt:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK

XP_022152854.1 uncharacterized protein LOC111020479 [Momordica charantia]2.8e-10486.27Show/hide
Query:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL
        +K +FD QVEALK RCEKKE SFDDGD GE  F SDILEA IPPKFKT TMKPYDGSKDPKDYVEVFE L+DFQAATDAIKC AF+IALTGSARLWYRRL
Subjt:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL

Query:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV
        PAR ISTYSQLRKEFISQFSSRHYDRKT THLATIRQKEGETLREYVTRF EEQLKV HCSDDSAMCYFLTGLADETLT+KL E+APATF EVLQK KKV
Subjt:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV

Query:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK
        IDGQELLRTKTGRPEK IDQ R   +K KADSK
Subjt:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK

XP_022155128.1 uncharacterized protein LOC111022267 [Momordica charantia]4.8e-10484.55Show/hide
Query:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL
        +K +FD QVEALK  CEKKE SFDDGD GE PF  DILEAPI PKFKT TMKPYDGSK+PKDYV+VFEGL++FQAATDAIKC AF+IA TGSARLWYRRL
Subjt:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL

Query:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV
        PARSISTYSQLRKEFISQFSSR+YDRKT THLATIRQK+GETLREYVTRFQEEQLKV HCSDDSAMCYFLTGLAD+TLT+KLGE+APATF EVLQKAKKV
Subjt:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV

Query:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK
        IDGQELLRTKTGRPEK+IDQ+R+  +K KA SK
Subjt:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]1.5e-10585.84Show/hide
Query:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL
        +K +FD QVEALK RCEKKE +FDDGD GESPF SDILEA IPPKFKT TMK YDGSKDPKDYVEVFEGL+DFQAATDAIKC AF+IALTGSARLWYRRL
Subjt:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL

Query:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV
        PARSISTYSQLRKEFISQF SRHYDRKTTTHLATIRQKEG+TL+EY+TRFQEEQLKVVHCSDDS+MCYFLTGLADET T+KLGE+A ATF EVLQ  KK 
Subjt:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV

Query:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK
        IDGQELLRTKT RPEKQIDQK+ S +KRKADSK
Subjt:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK

XP_022159250.1 uncharacterized protein LOC111025663 [Momordica charantia]8.7e-11490.99Show/hide
Query:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL
        MKH+FDEQVEALK RCEKKECSFDDGD GESPF SDILEAPIPPKFKT TMKPYDGSKDPKDYVEVFEGL+DFQAATDAIKC AF+IALT SARLWYRRL
Subjt:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL

Query:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV
        PARSISTYSQLRKEFISQFSSRHYDRKT THLATIRQKEGETLREYVTRF EEQLKV HCSDDSAMCYFLTGLADE LT+KLGE+APATF EVLQKAKKV
Subjt:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV

Query:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK
        IDGQELL+TKT RPEKQIDQK+L+ EKRKADSK
Subjt:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK

TrEMBL top hitse value%identityAlignment
A0A6J1DG02 uncharacterized protein LOC1110201053.0e-10484.12Show/hide
Query:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL
        +K +FD QV+AL+ RCE K  +FDDG+  ESPF SDILEA IPPKFKT TMKPYDGSKDPKDYVEVFEGLIDFQ  TDAIKC AF+IA TGSARLWYR+L
Subjt:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL

Query:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV
        PARSISTYSQLRKEFISQFSSRHYDRKT THLATIRQK+GETLREYVTRFQEEQLKV HCSDDSAMCYFLTGLADETLT+KLG++APATF EVLQK KKV
Subjt:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV

Query:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK
        IDGQELL+TK GRPEKQIDQK+ S EKRKA+SK
Subjt:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK

A0A6J1DHB3 uncharacterized protein LOC1110204791.4e-10486.27Show/hide
Query:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL
        +K +FD QVEALK RCEKKE SFDDGD GE  F SDILEA IPPKFKT TMKPYDGSKDPKDYVEVFE L+DFQAATDAIKC AF+IALTGSARLWYRRL
Subjt:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL

Query:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV
        PAR ISTYSQLRKEFISQFSSRHYDRKT THLATIRQKEGETLREYVTRF EEQLKV HCSDDSAMCYFLTGLADETLT+KL E+APATF EVLQK KKV
Subjt:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV

Query:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK
        IDGQELLRTKTGRPEK IDQ R   +K KADSK
Subjt:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK

A0A6J1DM55 uncharacterized protein LOC1110222672.3e-10484.55Show/hide
Query:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL
        +K +FD QVEALK  CEKKE SFDDGD GE PF  DILEAPI PKFKT TMKPYDGSK+PKDYV+VFEGL++FQAATDAIKC AF+IA TGSARLWYRRL
Subjt:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL

Query:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV
        PARSISTYSQLRKEFISQFSSR+YDRKT THLATIRQK+GETLREYVTRFQEEQLKV HCSDDSAMCYFLTGLAD+TLT+KLGE+APATF EVLQKAKKV
Subjt:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV

Query:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK
        IDGQELLRTKTGRPEK+IDQ+R+  +K KA SK
Subjt:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK

A0A6J1DPN4 uncharacterized protein LOC1110230607.2e-10685.84Show/hide
Query:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL
        +K +FD QVEALK RCEKKE +FDDGD GESPF SDILEA IPPKFKT TMK YDGSKDPKDYVEVFEGL+DFQAATDAIKC AF+IALTGSARLWYRRL
Subjt:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL

Query:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV
        PARSISTYSQLRKEFISQF SRHYDRKTTTHLATIRQKEG+TL+EY+TRFQEEQLKVVHCSDDS+MCYFLTGLADET T+KLGE+A ATF EVLQ  KK 
Subjt:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV

Query:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK
        IDGQELLRTKT RPEKQIDQK+ S +KRKADSK
Subjt:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK

A0A6J1DY58 uncharacterized protein LOC1110256634.2e-11490.99Show/hide
Query:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL
        MKH+FDEQVEALK RCEKKECSFDDGD GESPF SDILEAPIPPKFKT TMKPYDGSKDPKDYVEVFEGL+DFQAATDAIKC AF+IALT SARLWYRRL
Subjt:  MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRL

Query:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV
        PARSISTYSQLRKEFISQFSSRHYDRKT THLATIRQKEGETLREYVTRF EEQLKV HCSDDSAMCYFLTGLADE LT+KLGE+APATF EVLQKAKKV
Subjt:  PARSISTYSQLRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKV

Query:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK
        IDGQELL+TKT RPEKQIDQK+L+ EKRKADSK
Subjt:  IDGQELLRTKTGRPEKQIDQKRLSHEKRKADSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCACAGGTTCGACGAGCAGGTCGAGGCGCTCAAGACCAGGTGTGAGAAGAAAGAGTGCTCATTTGACGATGGCGACCAGGGAGAATCGCCATTCCCCTCGGACAT
CTTGGAGGCTCCAATCCCTCCGAAGTTCAAAACTCTCACCATGAAGCCTTATGATGGGTCTAAGGACCCAAAGGACTATGTTGAGGTCTTCGAGGGCCTCATTGACTTTC
AGGCGGCAACAGATGCGATCAAATGCCACGCCTTCAAGATCGCGCTCACCGGCAGCGCGCGCCTGTGGTATCGAAGACTGCCGGCCAGGTCGATCTCGACCTACTCCCAG
CTAAGGAAAGAATTTATTAGCCAATTCTCTTCTCGGCATTACGATAGAAAGACAACGACTCACCTCGCCACCATCAGGCAGAAGGAAGGAGAGACGCTGAGAGAATATGT
CACAAGGTTCCAAGAGGAGCAGCTGAAGGTTGTGCACTGCTCTGATGATTCGGCCATGTGCTATTTCCTCACCGGCCTGGCCGATGAGACTCTCACCATTAAGCTCGGAG
AGAAGGCTCCAGCAACCTTCATCGAAGTTCTGCAAAAGGCGAAGAAAGTCATCGATGGACAAGAACTCCTCCGAACCAAGACTGGCCGACCTGAGAAGCAGATCGACCAA
AAGAGGCTAAGCCATGAGAAGAGGAAGGCTGATTCTAAGCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCACAGGTTCGACGAGCAGGTCGAGGCGCTCAAGACCAGGTGTGAGAAGAAAGAGTGCTCATTTGACGATGGCGACCAGGGAGAATCGCCATTCCCCTCGGACAT
CTTGGAGGCTCCAATCCCTCCGAAGTTCAAAACTCTCACCATGAAGCCTTATGATGGGTCTAAGGACCCAAAGGACTATGTTGAGGTCTTCGAGGGCCTCATTGACTTTC
AGGCGGCAACAGATGCGATCAAATGCCACGCCTTCAAGATCGCGCTCACCGGCAGCGCGCGCCTGTGGTATCGAAGACTGCCGGCCAGGTCGATCTCGACCTACTCCCAG
CTAAGGAAAGAATTTATTAGCCAATTCTCTTCTCGGCATTACGATAGAAAGACAACGACTCACCTCGCCACCATCAGGCAGAAGGAAGGAGAGACGCTGAGAGAATATGT
CACAAGGTTCCAAGAGGAGCAGCTGAAGGTTGTGCACTGCTCTGATGATTCGGCCATGTGCTATTTCCTCACCGGCCTGGCCGATGAGACTCTCACCATTAAGCTCGGAG
AGAAGGCTCCAGCAACCTTCATCGAAGTTCTGCAAAAGGCGAAGAAAGTCATCGATGGACAAGAACTCCTCCGAACCAAGACTGGCCGACCTGAGAAGCAGATCGACCAA
AAGAGGCTAAGCCATGAGAAGAGGAAGGCTGATTCTAAGCCTTAG
Protein sequenceShow/hide protein sequence
MKHRFDEQVEALKTRCEKKECSFDDGDQGESPFPSDILEAPIPPKFKTLTMKPYDGSKDPKDYVEVFEGLIDFQAATDAIKCHAFKIALTGSARLWYRRLPARSISTYSQ
LRKEFISQFSSRHYDRKTTTHLATIRQKEGETLREYVTRFQEEQLKVVHCSDDSAMCYFLTGLADETLTIKLGEKAPATFIEVLQKAKKVIDGQELLRTKTGRPEKQIDQ
KRLSHEKRKADSKP