; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc09g27340 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g27340
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr9:20490432..20502002
RNA-Seq ExpressionMoc09g27340
SyntenyMoc09g27340
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CCA66036.1 hypothetical protein [Beta vulgaris subsp. vulgaris]3.4e-2228.99Show/hide
Query:  LWQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALCILEILSFETSSILLPS--IWERLMADLSPSTV--
        +W+ ++PPKVKLF WKA+HN L   +N+  RGM I+  CPRC E++ET EH ++ C  +   W +  L I    T +I   S  IW   + D    T   
Subjt:  LWQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALCILEILSFETSSILLPS--IWERLMADLSPSTV--

Query:  ALAVMVCWALWNDRNRGI--------------GGNTVCETSERCGW---ILTYVESYQKFSSRRVDYAKRFKDLVMDRSVSIPSVWLLCHVDA----ASY
        AL  M+CW +W  RN+ +                  V E  E C     + T       +S   V   K   D  + + V I    ++   +     A+ 
Subjt:  ALAVMVCWALWNDRNRGI--------------GGNTVCETSERCGW---ILTYVESYQKFSSRRVDYAKRFKDLVMDRSVSIPSVWLLCHVDA----ASY

Query:  RKGFF---PVIAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKACYNDVNGV
          G+    P +AE  ++R  L +    G +NL +  DC      ++G  S  +     ++DIL L  K   V F+H+ R  N +A +LA+         V
Subjt:  RKGFF---PVIAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKACYNDVNGV

Query:  WKDNFPS
        W + +PS
Subjt:  WKDNFPS

VFQ71533.1 unnamed protein product [Cuscuta campestris]4.4e-2229.05Show/hide
Query:  WQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALCILEILSFETSSILLPSIWERLMADLSPSTVALAVM
        W + V PK+K+ +W+A+ N LP+ISNL ++G+ I N CP C   +ETVEH    C  A  +WA   L ++     SI   + +  ++   S S + L  +
Subjt:  WQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALCILEILSFETSSILLPSIWERLMADLSPSTVALAVM

Query:  VCWALWNDRNRGIGGNTVCETSERCGWILTYVESYQKFSSRRV----------DYAKRFKDLVMDRSVSIPSVWLLCHVDAASYRKGFF-----------
          WALW  RN  +    V   S     +    +S+ + +S R             +  FK L +D ++  PS  +       ++   FF           
Subjt:  VCWALWNDRNRGIGGNTVCETSERCGWILTYVESYQKFSSRRV----------DYAKRFKDLVMDRSVSIPSVWLLCHVDAASYRKGFF-----------

Query:  -PVIAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKACYNDVNGVWKD
         P +AE  A R AL      GL  L +FSDC   V  + G+ +  S V S + D   L  +F+      + R  N +A +LAK+   +   GVWK+
Subjt:  -PVIAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKACYNDVNGVWKD

VFQ81626.1 unnamed protein product [Cuscuta campestris]3.4e-2229.25Show/hide
Query:  WQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALCILEILSFETSSILLPSIWERLMADLSPSTVALAVM
        W + V PK+K+ +W+A+ N LP+ISNL ++G+ I N CP C   +ETVEH    C  A  +WA   L ++     SIL  + +  ++   S S + L  +
Subjt:  WQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALCILEILSFETSSILLPSIWERLMADLSPSTVALAVM

Query:  VCWALWNDRNRGIGGNTVCETSERCGWILTYVESYQKFSSRRV----------DYAKRFKDLVMDRSVSIPSVWLLCHVDAASYRKGFF-----------
          WALW  RN  +    V   S     +    +S+ + +S R             +  FK L +D ++  PS  +       ++   FF           
Subjt:  VCWALWNDRNRGIGGNTVCETSERCGWILTYVESYQKFSSRRV----------DYAKRFKDLVMDRSVSIPSVWLLCHVDAASYRKGFF-----------

Query:  -PVIAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKACYNDVNGVW
         P +AE  A R AL      GL  L +FSDC   V  + G+ +  S V S + D   L  +F+      + R  N +A +LAK+       GVW
Subjt:  -PVIAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKACYNDVNGVW

XP_019182123.1 PREDICTED: uncharacterized protein LOC109177265 [Ipomoea nil]9.0e-2327.73Show/hide
Query:  LWQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALCILEILSFETSSILLPSIW-ERLMADLSPSTVALA
        +W+L VPPK ++F+WKAL N  P+I+NLV R +EI N CP C + +E + H L  C  AR +W +  L I + +    +    W E  +   + S   L 
Subjt:  LWQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALCILEILSFETSSILLPSIW-ERLMADLSPSTVALA

Query:  VMVC---WALWNDRNRGIGGNTVCETSERCG--------WILTYVESYQKFSSRRVDYAKRFKDLVMDRSVSIPSVWLLCHVDA----ASYRKGFF----
          +C   + +W  RN  +    +   S  C         W      +     +  +  A        + +  +P   ++C+ DA     S   GF+    
Subjt:  VMVC---WALWNDRNRGIGGNTVCETSERCG--------WILTYVESYQKFSSRRVDYAKRFKDLVMDRSVSIPSVWLLCHVDA----ASYRKGFF----

Query:  -----------------PVIAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKK
                         P++AE  AIREAL  ++     N+ IFSDC V V   +   S RS +   L+  L L   F       + R  N +A  LAK 
Subjt:  -----------------PVIAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKK

Query:  ACYNDVNGVWKDNFPSWLLNT
            D   VW+D+ PS++ +T
Subjt:  ACYNDVNGVWKDNFPSWLLNT

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]6.2e-3227.86Show/hide
Query:  VAKFIKPDRSWDIQKLGASLCPEDVGLIRQI-----------LLEYEE------------------------------DVEGLWQLEVPPKVKLFIWKAL
        VA FI  D +WD+  +  S C ED  LI  +           L  Y++                                  +W+L VP K+K+FIW++ 
Subjt:  VAKFIKPDRSWDIQKLGASLCPEDVGLIRQI-----------LLEYEE------------------------------DVEGLWQLEVPPKVKLFIWKAL

Query:  HNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALC--ILEILSFETSSILLPSIWERLMADLSPSTVALAVMVCWALWNDRNRGIGG
        H  +P+  NL+ RG+     C  C + +E++ HA F C  AR +W      L  LS E  +I    +W  L   L P  + LA +  W +WNDRN  I G
Subjt:  HNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALC--ILEILSFETSSILLPSIWERLMADLSPSTVALAVMVCWALWNDRNRGIGG

Query:  NTVCETSERCGWILTYVESYQK-----FSSR----------------------RVDYAKR-----FKDLVMDRSVSIPSVWLLCHVDAASYRKGF--FPV
          V     +C W+  +++S+ +     +S R                        D A R     F  ++ D S S+        V A S R  F   P+
Subjt:  NTVCETSERCGWILTYVESYQK-----FSSR----------------------RVDYAKR-----FKDLVMDRSVSIPSVWLLCHVDAASYRKGF--FPV

Query:  IAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKACYN-DVNGVWKDNFPSWL
        +AEI  I E L         +L + SD L+A+ L++ +I  R +  +W+ +I  L   F  + F H SR+ N  A  LAK    +      W  NFP+WL
Subjt:  IAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKACYN-DVNGVWKDNFPSWL

Query:  LN
        L+
Subjt:  LN

TrEMBL top hitse value%identityAlignment
A0A484L5C1 Uncharacterized protein2.2e-2229.05Show/hide
Query:  WQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALCILEILSFETSSILLPSIWERLMADLSPSTVALAVM
        W + V PK+K+ +W+A+ N LP+ISNL ++G+ I N CP C   +ETVEH    C  A  +WA   L ++     SI   + +  ++   S S + L  +
Subjt:  WQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALCILEILSFETSSILLPSIWERLMADLSPSTVALAVM

Query:  VCWALWNDRNRGIGGNTVCETSERCGWILTYVESYQKFSSRRV----------DYAKRFKDLVMDRSVSIPSVWLLCHVDAASYRKGFF-----------
          WALW  RN  +    V   S     +    +S+ + +S R             +  FK L +D ++  PS  +       ++   FF           
Subjt:  VCWALWNDRNRGIGGNTVCETSERCGWILTYVESYQKFSSRRV----------DYAKRFKDLVMDRSVSIPSVWLLCHVDAASYRKGFF-----------

Query:  -PVIAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKACYNDVNGVWKD
         P +AE  A R AL      GL  L +FSDC   V  + G+ +  S V S + D   L  +F+      + R  N +A +LAK+   +   GVWK+
Subjt:  -PVIAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKACYNDVNGVWKD

A0A484M0D6 Uncharacterized protein1.6e-2229.25Show/hide
Query:  WQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALCILEILSFETSSILLPSIWERLMADLSPSTVALAVM
        W + V PK+K+ +W+A+ N LP+ISNL ++G+ I N CP C   +ETVEH    C  A  +WA   L ++     SIL  + +  ++   S S + L  +
Subjt:  WQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALCILEILSFETSSILLPSIWERLMADLSPSTVALAVM

Query:  VCWALWNDRNRGIGGNTVCETSERCGWILTYVESYQKFSSRRV----------DYAKRFKDLVMDRSVSIPSVWLLCHVDAASYRKGFF-----------
          WALW  RN  +    V   S     +    +S+ + +S R             +  FK L +D ++  PS  +       ++   FF           
Subjt:  VCWALWNDRNRGIGGNTVCETSERCGWILTYVESYQKFSSRRV----------DYAKRFKDLVMDRSVSIPSVWLLCHVDAASYRKGFF-----------

Query:  -PVIAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKACYNDVNGVW
         P +AE  A R AL      GL  L +FSDC   V  + G+ +  S V S + D   L  +F+      + R  N +A +LAK+       GVW
Subjt:  -PVIAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKACYNDVNGVW

A0A6J1DX30 uncharacterized protein LOC1110248743.0e-3227.86Show/hide
Query:  VAKFIKPDRSWDIQKLGASLCPEDVGLIRQI-----------LLEYEE------------------------------DVEGLWQLEVPPKVKLFIWKAL
        VA FI  D +WD+  +  S C ED  LI  +           L  Y++                                  +W+L VP K+K+FIW++ 
Subjt:  VAKFIKPDRSWDIQKLGASLCPEDVGLIRQI-----------LLEYEE------------------------------DVEGLWQLEVPPKVKLFIWKAL

Query:  HNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALC--ILEILSFETSSILLPSIWERLMADLSPSTVALAVMVCWALWNDRNRGIGG
        H  +P+  NL+ RG+     C  C + +E++ HA F C  AR +W      L  LS E  +I    +W  L   L P  + LA +  W +WNDRN  I G
Subjt:  HNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALC--ILEILSFETSSILLPSIWERLMADLSPSTVALAVMVCWALWNDRNRGIGG

Query:  NTVCETSERCGWILTYVESYQK-----FSSR----------------------RVDYAKR-----FKDLVMDRSVSIPSVWLLCHVDAASYRKGF--FPV
          V     +C W+  +++S+ +     +S R                        D A R     F  ++ D S S+        V A S R  F   P+
Subjt:  NTVCETSERCGWILTYVESYQK-----FSSR----------------------RVDYAKR-----FKDLVMDRSVSIPSVWLLCHVDAASYRKGF--FPV

Query:  IAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKACYN-DVNGVWKDNFPSWL
        +AEI  I E L         +L + SD L+A+ L++ +I  R +  +W+ +I  L   F  + F H SR+ N  A  LAK    +      W  NFP+WL
Subjt:  IAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKACYN-DVNGVWKDNFPSWL

Query:  LN
        L+
Subjt:  LN

A0A803Q154 Uncharacterized protein3.9e-2429.61Show/hide
Query:  EEDVEGLWQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVE---HALFDCSCARDLWALCIL--EILSFETSSILLPSIWERLMA
        +++ E  W+ +VPPKVK F+WK  H  LP+   L  RG+ +   CPRC  E   +E   H L+DCS ++++W  C L  +++   ++ +LL   +++L  
Subjt:  EEDVEGLWQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVE---HALFDCSCARDLWALCIL--EILSFETSSILLPSIWERLMA

Query:  DLSPSTVALAVMVCWALWNDRNRGIGGNTVCETSERCGWILTYVESYQKFSSRRVDYAKRFKDLVMDRSVSIPSVWLLCHVDAASYRKGFFPVIAEIEAI
          SPST  + ++V W LW+ RN+ + G    +  +   W   YV+ +Q+ +        R  +  M R  S           A + R    P++AE+ AI
Subjt:  DLSPSTVALAVMVCWALWNDRNRGIGGNTVCETSERCGWILTYVESYQKFSSRRVDYAKRFKDLVMDRSVSIPSVWLLCHVDAASYRKGFFPVIAEIEAI

Query:  REALLMVEVGGLQNLAIFSDCLVAVHLVQG-DISVRSEVASWLE-DILVLKGKFDEVFFDHISRKQNCLADILAKKACYNDVNGVWKDNFPSWLLNTFNK
        RE LL      L    + +DCL AV L+QG ++  R E    +E   L+  G    + F  + R+ N +A +LA  A  N V+ +W    P    +  ++
Subjt:  REALLMVEVGGLQNLAIFSDCLVAVHLVQG-DISVRSEVASWLE-DILVLKGKFDEVFFDHISRKQNCLADILAKKACYNDVNGVWKDNFPSWLLNTFNK

Query:  GVSF
         + F
Subjt:  GVSF

F4NCI4 Reverse transcriptase domain-containing protein1.6e-2228.99Show/hide
Query:  LWQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALCILEILSFETSSILLPS--IWERLMADLSPSTV--
        +W+ ++PPKVKLF WKA+HN L   +N+  RGM I+  CPRC E++ET EH ++ C  +   W +  L I    T +I   S  IW   + D    T   
Subjt:  LWQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALCILEILSFETSSILLPS--IWERLMADLSPSTV--

Query:  ALAVMVCWALWNDRNRGI--------------GGNTVCETSERCGW---ILTYVESYQKFSSRRVDYAKRFKDLVMDRSVSIPSVWLLCHVDA----ASY
        AL  M+CW +W  RN+ +                  V E  E C     + T       +S   V   K   D  + + V I    ++   +     A+ 
Subjt:  ALAVMVCWALWNDRNRGI--------------GGNTVCETSERCGW---ILTYVESYQKFSSRRVDYAKRFKDLVMDRSVSIPSVWLLCHVDA----ASY

Query:  RKGFF---PVIAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKACYNDVNGV
          G+    P +AE  ++R  L +    G +NL +  DC      ++G  S  +     ++DIL L  K   V F+H+ R  N +A +LA+         V
Subjt:  RKGFF---PVIAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKACYNDVNGV

Query:  WKDNFPS
        W + +PS
Subjt:  WKDNFPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10000.1 Ribonuclease H-like superfamily protein1.6e-1426.01Show/hide
Query:  PKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALC------------ILEILSFETSSILLPSIWERLMADLSPST
        PK+KLF+WKA    LP  + LV R +     C RC    ET  H LF C  A  +W L             ILE L+    +I+LP +           T
Subjt:  PKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALC------------ILEILSFETSSILLPSIWERLMADLSPST

Query:  VALAVMVCWALWNDRNRGIGGNTVCETSERCGWILTYVESYQKFSSRRVDYAKRFKDLVMDRSVSIPSVWLLCHVDA-----------------------
          L   +CW +W  RN+ I  N+     E    +   V+    + S ++   K         S +  +   LC+VDA                       
Subjt:  VALAVMVCWALWNDRNRGIGGNTVCETSERCGWILTYVESYQKFSSRRVDYAKRFKDLVMDRSVSIPSVWLLCHVDA-----------------------

Query:  ------ASYRKGFFPVIAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAK
              A  R+   P+ AE  AI+ A+L        +L + SD    V  +  ++S+ +E+   L +I  ++ +F  + F  I R  N +AD  AK
Subjt:  ------ASYRKGFFPVIAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAK

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.6e-0924.04Show/hide
Query:  ENQCPRCYEEKETVEHALFDCSCARDLWALC-ILEILSFETSSILLPSIWERLMADLSPSTVA----LAVMVCWALWNDRNRGIGGNTVCETSERCGWIL
        E  C RC + +ETV H LF C  AR +WA+  I      E +  L  +++  L  ++    +     L   + W LW  RN  +      +  E    + 
Subjt:  ENQCPRCYEEKETVEHALFDCSCARDLWALC-ILEILSFETSSILLPSIWERLMADLSPSTVA----LAVMVCWALWNDRNRGIGGNTVCETSERCGWIL

Query:  TYVESYQKFSSRRVDYAKRFKDLVMDRSVSI-----PSVWLLCHVDAA----SYRKGFFPVI-----------------------AEIEAIREALLMVEV
          +E ++++S+RR +   +     ++R++S+     P  W+ C+ DA     + R G   ++                       AE+EA+R A+L +  
Subjt:  TYVESYQKFSSRRVDYAKRFKDLVMDRSVSI-----PSVWLLCHVDAA----SYRKGFFPVI-----------------------AEIEAIREALLMVEV

Query:  GGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKA-CYNDVNGVWKDNFPSWLLNT
           + +   SD    V+L+  D      +   LEDI  L   F+EV F+   R  N +AD +A+++  +++ +       P WL +T
Subjt:  GGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKA-CYNDVNGVWKDNFPSWLLNT

AT3G09510.1 Ribonuclease H-like superfamily protein3.0e-2428.3Show/hide
Query:  LWQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALCILEIL-------SFETS-SILLPSIWERLMADLS
        +W L + PK+K F+W+AL   L +   L +RGM I+  CPRC+ E E++ HALF C  A   W L    ++        FE + S +L  + +  M+D  
Subjt:  LWQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALCILEIL-------SFETS-SILLPSIWERLMADLS

Query:  PSTVALAVMVCWALWNDRN-------RGIGGNTVCETSERCGWILTYVESYQKFSS--RRV------------DYAKRFKDLVMD-RSVSIPSVWLLCHV
             L V + W +W  RN       R     TV          L   +S++K  S  R++             Y K   D   D + +     W++ + 
Subjt:  PSTVALAVMVCWALWNDRN-------RGIGGNTVCETSERCGWILTYVESYQKFSS--RRV------------DYAKRFKDLVMD-RSVSIPSVWLLCHV

Query:  DAASYRKGFF-------PVIAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKK
               G         P+ AE +A+  AL    + G   + +  DC   ++L+ G IS  S +A+ LEDI     KF  + F  I RK N LA +LAK 
Subjt:  DAASYRKGFF-------PVIAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKK

Query:  ACYNDVNGVWKDNFPSWL
         C          + P WL
Subjt:  ACYNDVNGVWKDNFPSWL

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.9e-1036Show/hide
Query:  LWQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCA-RDLWALCILEILSFETSSIL------LPSIWERLMADLSP
        +W L++ PK+KL IWKAL+N LP  + L+SR + IE  C RC  + ET+ H LF+C  A R++    I++   ++T+  +       PS++ R+  + +P
Subjt:  LWQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCA-RDLWALCILEILSFETSSIL------LPSIWERLMADLSP

AT4G29090.1 Ribonuclease H-like superfamily protein4.3e-1525.25Show/hide
Query:  LWQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALCILEI-LSFE-TSSILLPSIWERLMADLSP---ST
        +W+ +  PK++ F+WK L N+LP    L  R +  E+ C RC   KETV H LF C+ AR  WA+  + I L  E   SI +   W   + + +P     
Subjt:  LWQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCPRCYEEKETVEHALFDCSCARDLWALCILEI-LSFE-TSSILLPSIWERLMADLSP---ST

Query:  VALAVMVCWALWNDRNRGIGGNTVCETSERCGWILTYVESYQ-KFSSRRVDYAKRFKDLVMDRSVSIPSVWLLCHVDAA----SYRKGFFPVI-------
          L   + W LW +RN  +         E        +E ++ +  +       +       R    P  W+ C+ DA     + R G   V+       
Subjt:  VALAVMVCWALWNDRNRGIGGNTVCETSERCGWILTYVESYQ-KFSSRRVDYAKRFKDLVMDRSVSIPSVWLLCHVDAA----SYRKGFFPVI-------

Query:  ----------------AEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKA
                        AE+EA+R A+L +       +   SD  V + ++  D  +   +   ++D+  L  +F EV F  I R+ N LA+ +A+++
Subjt:  ----------------AEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADILAKKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTGTCGGGCTTGTTTCTATTGGACCTGGGGTTGGTCAAGGTACTGCTATGGGCCAAGAGGAAGTGACTCGGGAGGAGAAGAAGGAGCGTAGGGATTCTAGTTG
CCCCTCATCCCATGATGAAGTGCGGAGATCATTTCTTTGTCGGACGAAAGGGCTTCAAAATACATCCTACCGACTCTTCTCCTCGCTCACGGAACTCCCCCAACCGAGTC
TCAGGTCCCAGTCTCAGGTCAAGAGAGAAGAGCGATGGCATACTTTGAGTCACTTGCCTCAGGCATTACCTATTCCTGTCAACCAGCTATGTCATGATAACAATTGTATT
GTTGTGTTCAATTATGATGTAATTCAGGATAAATCGTCGAGCACAATACTTTTCCAAGGTCCTAACATCAATCGTCTATATCACATTCCATCTTCCAGCTCAAGTTCTTT
TTCCTCGGGTCCTCTATCTACTGTTGCTCATGCATCCTCACAATTTGATCTTTCACCAGCTAACACAACACTTCATTCACACTATTCTAATGACATTGCATACCTTATGC
CTTCTTCTTCTACTGATACTCTAGCAACTCAATCTAATACTACTGCCATTCCTAGTCATGCATCTACTGATCCTTGCGTCCCTATCTCTACTGCTAACTCCACTGCTACT
CATGATTATATTTCTATTCCTGGTGATATTCCTCCCCAATCGACTATCAAAACTTTGGTGGGGTTCCCTCATGGGGATGGCTGTCTGGTGGCCAAATTTATTAAGCCAGA
TAGAAGCTGGGATATCCAGAAATTGGGAGCTTCTTTATGCCCGGAAGATGTGGGTCTAATTCGGCAAATTCTATTAGAATACGAAGAGGATGTGGAAGGTTTGTGGCAGC
TTGAGGTGCCTCCTAAAGTCAAGCTGTTTATTTGGAAAGCCCTCCATAATACCCTCCCCAGCATATCAAATTTGGTTTCCAGGGGAATGGAGATTGAGAATCAGTGTCCT
AGGTGCTACGAGGAGAAGGAGACAGTGGAGCATGCCTTGTTTGACTGCAGTTGTGCTCGGGATCTTTGGGCGCTATGCATTCTGGAGATTCTTTCATTCGAAACATCCTC
GATCCTTCTACCATCTATCTGGGAGCGTTTGATGGCAGATCTTAGCCCGTCTACAGTGGCCTTGGCAGTGATGGTGTGCTGGGCTCTTTGGAATGATAGGAATAGAGGCA
TTGGAGGAAATACTGTTTGTGAGACTTCAGAAAGGTGCGGCTGGATTCTCACTTACGTCGAATCATATCAAAAGTTTTCTTCCCGGCGTGTGGACTATGCTAAGAGATTC
AAGGACTTGGTGATGGATAGATCTGTCTCGATTCCTTCAGTTTGGCTTCTTTGCCATGTAGATGCGGCTTCCTATCGAAAGGGGTTCTTTCCAGTCATCGCTGAAATCGA
GGCTATCCGTGAAGCATTATTGATGGTAGAAGTTGGGGGTTTGCAAAATCTTGCAATTTTTTCTGATTGTTTGGTGGCAGTTCATCTGGTCCAAGGAGATATTTCAGTGA
GATCTGAGGTTGCTTCTTGGTTAGAGGACATTCTGGTTTTGAAGGGTAAGTTTGACGAGGTGTTTTTTGATCATATAAGTAGAAAGCAGAACTGTCTGGCTGACATCTTA
GCAAAAAAGGCTTGTTACAATGATGTGAATGGTGTCTGGAAAGATAATTTTCCTAGTTGGCTTTTAAATACCTTTAACAAGGGTGTTTCTTTCCATGCTCGAGACAGCAG
CGTCAAGGCATTGTCGAAGTTGCAGAAAACCAAAGAGCAAAGAACACGTGTAGCGCCTAGGCGCCTGTCACGCCTCCCATTTGCTACAAAAATCCGAGGAAGAGTCTGCT
GCAGAGGGGCAGCGGTTAGGAAGTGGAGACCAGCTCCCGAAGTTCAGCTAACCCTCAAGGCCAGCGCCACGAGCCATCGGGGAACAAAAAATAAGCAATCTTCGTCTGGT
ACAAGCTTGCAGCATCTGATACGCAACAACCCAAGCGTATTGAGCTACTCGAGCCACAAGCCACTTGAATCCAATCATAGATATGGTTCAACAAAAAAGGCCGCCAGCCC
CCCCCCCCCCCCCCCCCCCCCGATTTCTCCTTCTTCTTCAACCCCAGCCGCCCCCTATGGTTTCATCCTCGTCGGCCACCACCTCCTCCGGCGAGAACCCAGACCAACGC
CGACGAGGGCACGACGTACGGCGGCGGTGCAGCGATCCTTTAGCAGTAGTGGCGGTTCAGTGGTGTGCCTCGTGAATTTCGGTGGCCCGAGCTCAGATCCGACATTGGTA
CGGTGTTCCAGCGACTATCCACGGCGGTGCACGACAGACAGAGGAGTTTTGGTTCGTTCTCTGGCCTCGACAGCCCCGAACAGTCCGAATTCACGAAGCCCAGCGAATTT
GGTGACGTTTTCCGGCCTTCCAGTGACGTTCGATGTTGACCCATACCCAAACGGAGCTTGGAAATCCTTCGGCAAGCTTAATAACGTGTCAGGGCACTTGAGTATCGAGC
TAGCTCTTGGGATGGTGATGGCGAGGAGGAGGCTTGATCGGAAAGACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTGTCGGGCTTGTTTCTATTGGACCTGGGGTTGGTCAAGGTACTGCTATGGGCCAAGAGGAAGTGACTCGGGAGGAGAAGAAGGAGCGTAGGGATTCTAGTTG
CCCCTCATCCCATGATGAAGTGCGGAGATCATTTCTTTGTCGGACGAAAGGGCTTCAAAATACATCCTACCGACTCTTCTCCTCGCTCACGGAACTCCCCCAACCGAGTC
TCAGGTCCCAGTCTCAGGTCAAGAGAGAAGAGCGATGGCATACTTTGAGTCACTTGCCTCAGGCATTACCTATTCCTGTCAACCAGCTATGTCATGATAACAATTGTATT
GTTGTGTTCAATTATGATGTAATTCAGGATAAATCGTCGAGCACAATACTTTTCCAAGGTCCTAACATCAATCGTCTATATCACATTCCATCTTCCAGCTCAAGTTCTTT
TTCCTCGGGTCCTCTATCTACTGTTGCTCATGCATCCTCACAATTTGATCTTTCACCAGCTAACACAACACTTCATTCACACTATTCTAATGACATTGCATACCTTATGC
CTTCTTCTTCTACTGATACTCTAGCAACTCAATCTAATACTACTGCCATTCCTAGTCATGCATCTACTGATCCTTGCGTCCCTATCTCTACTGCTAACTCCACTGCTACT
CATGATTATATTTCTATTCCTGGTGATATTCCTCCCCAATCGACTATCAAAACTTTGGTGGGGTTCCCTCATGGGGATGGCTGTCTGGTGGCCAAATTTATTAAGCCAGA
TAGAAGCTGGGATATCCAGAAATTGGGAGCTTCTTTATGCCCGGAAGATGTGGGTCTAATTCGGCAAATTCTATTAGAATACGAAGAGGATGTGGAAGGTTTGTGGCAGC
TTGAGGTGCCTCCTAAAGTCAAGCTGTTTATTTGGAAAGCCCTCCATAATACCCTCCCCAGCATATCAAATTTGGTTTCCAGGGGAATGGAGATTGAGAATCAGTGTCCT
AGGTGCTACGAGGAGAAGGAGACAGTGGAGCATGCCTTGTTTGACTGCAGTTGTGCTCGGGATCTTTGGGCGCTATGCATTCTGGAGATTCTTTCATTCGAAACATCCTC
GATCCTTCTACCATCTATCTGGGAGCGTTTGATGGCAGATCTTAGCCCGTCTACAGTGGCCTTGGCAGTGATGGTGTGCTGGGCTCTTTGGAATGATAGGAATAGAGGCA
TTGGAGGAAATACTGTTTGTGAGACTTCAGAAAGGTGCGGCTGGATTCTCACTTACGTCGAATCATATCAAAAGTTTTCTTCCCGGCGTGTGGACTATGCTAAGAGATTC
AAGGACTTGGTGATGGATAGATCTGTCTCGATTCCTTCAGTTTGGCTTCTTTGCCATGTAGATGCGGCTTCCTATCGAAAGGGGTTCTTTCCAGTCATCGCTGAAATCGA
GGCTATCCGTGAAGCATTATTGATGGTAGAAGTTGGGGGTTTGCAAAATCTTGCAATTTTTTCTGATTGTTTGGTGGCAGTTCATCTGGTCCAAGGAGATATTTCAGTGA
GATCTGAGGTTGCTTCTTGGTTAGAGGACATTCTGGTTTTGAAGGGTAAGTTTGACGAGGTGTTTTTTGATCATATAAGTAGAAAGCAGAACTGTCTGGCTGACATCTTA
GCAAAAAAGGCTTGTTACAATGATGTGAATGGTGTCTGGAAAGATAATTTTCCTAGTTGGCTTTTAAATACCTTTAACAAGGGTGTTTCTTTCCATGCTCGAGACAGCAG
CGTCAAGGCATTGTCGAAGTTGCAGAAAACCAAAGAGCAAAGAACACGTGTAGCGCCTAGGCGCCTGTCACGCCTCCCATTTGCTACAAAAATCCGAGGAAGAGTCTGCT
GCAGAGGGGCAGCGGTTAGGAAGTGGAGACCAGCTCCCGAAGTTCAGCTAACCCTCAAGGCCAGCGCCACGAGCCATCGGGGAACAAAAAATAAGCAATCTTCGTCTGGT
ACAAGCTTGCAGCATCTGATACGCAACAACCCAAGCGTATTGAGCTACTCGAGCCACAAGCCACTTGAATCCAATCATAGATATGGTTCAACAAAAAAGGCCGCCAGCCC
CCCCCCCCCCCCCCCCCCCCCGATTTCTCCTTCTTCTTCAACCCCAGCCGCCCCCTATGGTTTCATCCTCGTCGGCCACCACCTCCTCCGGCGAGAACCCAGACCAACGC
CGACGAGGGCACGACGTACGGCGGCGGTGCAGCGATCCTTTAGCAGTAGTGGCGGTTCAGTGGTGTGCCTCGTGAATTTCGGTGGCCCGAGCTCAGATCCGACATTGGTA
CGGTGTTCCAGCGACTATCCACGGCGGTGCACGACAGACAGAGGAGTTTTGGTTCGTTCTCTGGCCTCGACAGCCCCGAACAGTCCGAATTCACGAAGCCCAGCGAATTT
GGTGACGTTTTCCGGCCTTCCAGTGACGTTCGATGTTGACCCATACCCAAACGGAGCTTGGAAATCCTTCGGCAAGCTTAATAACGTGTCAGGGCACTTGAGTATCGAGC
TAGCTCTTGGGATGGTGATGGCGAGGAGGAGGCTTGATCGGAAAGACCATTAG
Protein sequenceShow/hide protein sequence
MAAVGLVSIGPGVGQGTAMGQEEVTREEKKERRDSSCPSSHDEVRRSFLCRTKGLQNTSYRLFSSLTELPQPSLRSQSQVKREERWHTLSHLPQALPIPVNQLCHDNNCI
VVFNYDVIQDKSSSTILFQGPNINRLYHIPSSSSSSFSSGPLSTVAHASSQFDLSPANTTLHSHYSNDIAYLMPSSSTDTLATQSNTTAIPSHASTDPCVPISTANSTAT
HDYISIPGDIPPQSTIKTLVGFPHGDGCLVAKFIKPDRSWDIQKLGASLCPEDVGLIRQILLEYEEDVEGLWQLEVPPKVKLFIWKALHNTLPSISNLVSRGMEIENQCP
RCYEEKETVEHALFDCSCARDLWALCILEILSFETSSILLPSIWERLMADLSPSTVALAVMVCWALWNDRNRGIGGNTVCETSERCGWILTYVESYQKFSSRRVDYAKRF
KDLVMDRSVSIPSVWLLCHVDAASYRKGFFPVIAEIEAIREALLMVEVGGLQNLAIFSDCLVAVHLVQGDISVRSEVASWLEDILVLKGKFDEVFFDHISRKQNCLADIL
AKKACYNDVNGVWKDNFPSWLLNTFNKGVSFHARDSSVKALSKLQKTKEQRTRVAPRRLSRLPFATKIRGRVCCRGAAVRKWRPAPEVQLTLKASATSHRGTKNKQSSSG
TSLQHLIRNNPSVLSYSSHKPLESNHRYGSTKKAASPPPPPPPPISPSSSTPAAPYGFILVGHHLLRREPRPTPTRARRTAAVQRSFSSSGGSVVCLVNFGGPSSDPTLV
RCSSDYPRRCTTDRGVLVRSLASTAPNSPNSRSPANLVTFSGLPVTFDVDPYPNGAWKSFGKLNNVSGHLSIELALGMVMARRRLDRKDH