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Moc09g27740 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g27740
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationchr9:20779416..20782691
RNA-Seq ExpressionMoc09g27740
SyntenyMoc09g27740
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB49850.1 hypothetical protein L484_000844 [Morus notabilis]4.4e-1232.48Show/hide
Query:  DILVHPSDEQVEEARRLICRPHKTWTISTTRKLSLKPLDINDQATVWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSKKMVG
        +++    +EQ++E  + I      W +S     +    ++   A VW + + +RL+ ++H  +I RNRA+++Y ++ G   N G LI ++IR+C++K  G
Subjt:  DILVHPSDEQVEEARRLICRPHKTWTISTTRKLSLKPLDINDQATVWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSKKMVG

Query:  PLVFPGLITELCLQAGV
         L FP LI+ELC+Q+ V
Subjt:  PLVFPGLITELCLQAGV

KOM28175.1 hypothetical protein LR48_Vigan504s000300 [Vigna angularis]7.6e-1234.96Show/hide
Query:  EQVEEARRLICRPHKTWTISTTRK-LSLKPLDINDQATVWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSKKMVGPLVFPGL
        EQ+E+A   +C    T+  +  ++ L +K + ++  + +WM +V + + P +H S +  NRA+++Y ++ G   N G+LI NEIR+C+     PL  P L
Subjt:  EQVEEARRLICRPHKTWTISTTRK-LSLKPLDINDQATVWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSKKMVGPLVFPGL

Query:  ITELCLQAGVEADDANVVMPKKP
        IT LC Q GV+     V  P+KP
Subjt:  ITELCLQAGVEADDANVVMPKKP

RYQ84197.1 hypothetical protein Ahy_B10g103224 [Arachis hypogaea]7.6e-1229.47Show/hide
Query:  DEQVEEARRLICRPHKTWTI-STTRKLSLKPLDINDQATVWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSK--KMVGPLVF
        D++  +    +C+    W + S  + L L+  D+  QA  W  +V+  LIPTS++S +  NRA+M++ +MKG E N GE+I   I   ++  K    L +
Subjt:  DEQVEEARRLICRPHKTWTI-STTRKLSLKPLDINDQATVWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSK--KMVGPLVF

Query:  PGLITELCLQAGV---EADDANVVMPKKPFTSLRRVRGYSIVREEDSPITAADPKTRGVVTREQYDELRHNYELLLVTQRATCAFLKKIY
        P  I  LC  AGV   E ++ ++V   KP T  +R+   + V+ E  P+ A   K +G    E+++++  +  L L   +A    + + Y
Subjt:  PGLITELCLQAGV---EADDANVVMPKKPFTSLRRVRGYSIVREEDSPITAADPKTRGVVTREQYDELRHNYELLLVTQRATCAFLKKIY

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]1.0e-10185.46Show/hide
Query:  GNDILVHPSDEQVEEARRLICRPHKTWTISTTRKLSLKPLDINDQATVWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSKKM
        GN+ILVHPSDEQVEEARRLICRPHKTWTIST  KLSLKPLDIN+QATVWMYVVKNRLIPTS+DSSIKRNRAM+VYIL+KGVEFNFGELIRNEI+SCS+K+
Subjt:  GNDILVHPSDEQVEEARRLICRPHKTWTISTTRKLSLKPLDINDQATVWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSKKM

Query:  VGPLVFPGLITELCLQAGVEADDANVVMPKKPFTSLRRVRGYSIVREEDSPITAADPKTRGVVTREQYDELRHNYELLLVTQRATCAFLKKIYGDEAPSF
                        AGVEA DANVVMPKKPF SLR+VRGYSIVREEDSPITAADP+TRGVVTREQYDELRH YELLLVTQRATCAFLKKIYGDEAPSF
Subjt:  VGPLVFPGLITELCLQAGVEADDANVVMPKKPFTSLRRVRGYSIVREEDSPITAADPKTRGVVTREQYDELRHNYELLLVTQRATCAFLKKIYGDEAPSF

Query:  PDELTADLPSSSRLPTDSTDDESSDDE
        PDEL ADLPSSSRLPTDS DDESSDDE
Subjt:  PDELTADLPSSSRLPTDSTDDESSDDE

XP_022159289.1 uncharacterized protein LOC111025702 [Momordica charantia]2.3e-6171.43Show/hide
Query:  VWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSKKMVGPLVFPGLITELCLQAGVEADDANVVMPKKPFTSLRRVRGYSIVRE
        +W YVVKN LI TS+DSSI++ R M+VYILMKG+EFNF ELIRNEI  C++KMVGPL+FP  I ELCL+AGVEAD  +VVM KK  TS+RRVRGY IVRE
Subjt:  VWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSKKMVGPLVFPGLITELCLQAGVEADDANVVMPKKPFTSLRRVRGYSIVRE

Query:  EDSPITAADPKTRGVVTREQYDE---LRHNYELLLVTQRATCAFLKKIYGDEAPSFPDELTADLPSSSRLPTDSTDDESSDD
        EDSPITAADP TRGVVTREQYDE   LRH Y+LL  TQ ATC FLKK+YGD APS PDEL ADLPSSSR     T D+S  D
Subjt:  EDSPITAADPKTRGVVTREQYDE---LRHNYELLLVTQRATCAFLKKIYGDEAPSFPDELTADLPSSSRLPTDSTDDESSDD

TrEMBL top hitse value%identityAlignment
A0A0L9TC28 Uncharacterized protein3.7e-1234.96Show/hide
Query:  EQVEEARRLICRPHKTWTISTTRK-LSLKPLDINDQATVWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSKKMVGPLVFPGL
        EQ+E+A   +C    T+  +  ++ L +K + ++  + +WM +V + + P +H S +  NRA+++Y ++ G   N G+LI NEIR+C+     PL  P L
Subjt:  EQVEEARRLICRPHKTWTISTTRK-LSLKPLDINDQATVWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSKKMVGPLVFPGL

Query:  ITELCLQAGVEADDANVVMPKKP
        IT LC Q GV+     V  P+KP
Subjt:  ITELCLQAGVEADDANVVMPKKP

A0A444X3G7 Uncharacterized protein3.7e-1229.47Show/hide
Query:  DEQVEEARRLICRPHKTWTI-STTRKLSLKPLDINDQATVWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSK--KMVGPLVF
        D++  +    +C+    W + S  + L L+  D+  QA  W  +V+  LIPTS++S +  NRA+M++ +MKG E N GE+I   I   ++  K    L +
Subjt:  DEQVEEARRLICRPHKTWTI-STTRKLSLKPLDINDQATVWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSK--KMVGPLVF

Query:  PGLITELCLQAGV---EADDANVVMPKKPFTSLRRVRGYSIVREEDSPITAADPKTRGVVTREQYDELRHNYELLLVTQRATCAFLKKIY
        P  I  LC  AGV   E ++ ++V   KP T  +R+   + V+ E  P+ A   K +G    E+++++  +  L L   +A    + + Y
Subjt:  PGLITELCLQAGV---EADDANVVMPKKPFTSLRRVRGYSIVREEDSPITAADPKTRGVVTREQYDELRHNYELLLVTQRATCAFLKKIY

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220075.0e-10285.46Show/hide
Query:  GNDILVHPSDEQVEEARRLICRPHKTWTISTTRKLSLKPLDINDQATVWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSKKM
        GN+ILVHPSDEQVEEARRLICRPHKTWTIST  KLSLKPLDIN+QATVWMYVVKNRLIPTS+DSSIKRNRAM+VYIL+KGVEFNFGELIRNEI+SCS+K+
Subjt:  GNDILVHPSDEQVEEARRLICRPHKTWTISTTRKLSLKPLDINDQATVWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSKKM

Query:  VGPLVFPGLITELCLQAGVEADDANVVMPKKPFTSLRRVRGYSIVREEDSPITAADPKTRGVVTREQYDELRHNYELLLVTQRATCAFLKKIYGDEAPSF
                        AGVEA DANVVMPKKPF SLR+VRGYSIVREEDSPITAADP+TRGVVTREQYDELRH YELLLVTQRATCAFLKKIYGDEAPSF
Subjt:  VGPLVFPGLITELCLQAGVEADDANVVMPKKPFTSLRRVRGYSIVREEDSPITAADPKTRGVVTREQYDELRHNYELLLVTQRATCAFLKKIYGDEAPSF

Query:  PDELTADLPSSSRLPTDSTDDESSDDE
        PDEL ADLPSSSRLPTDS DDESSDDE
Subjt:  PDELTADLPSSSRLPTDSTDDESSDDE

A0A6J1E204 uncharacterized protein LOC1110257021.1e-6171.43Show/hide
Query:  VWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSKKMVGPLVFPGLITELCLQAGVEADDANVVMPKKPFTSLRRVRGYSIVRE
        +W YVVKN LI TS+DSSI++ R M+VYILMKG+EFNF ELIRNEI  C++KMVGPL+FP  I ELCL+AGVEAD  +VVM KK  TS+RRVRGY IVRE
Subjt:  VWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSKKMVGPLVFPGLITELCLQAGVEADDANVVMPKKPFTSLRRVRGYSIVRE

Query:  EDSPITAADPKTRGVVTREQYDE---LRHNYELLLVTQRATCAFLKKIYGDEAPSFPDELTADLPSSSRLPTDSTDDESSDD
        EDSPITAADP TRGVVTREQYDE   LRH Y+LL  TQ ATC FLKK+YGD APS PDEL ADLPSSSR     T D+S  D
Subjt:  EDSPITAADPKTRGVVTREQYDE---LRHNYELLLVTQRATCAFLKKIYGDEAPSFPDELTADLPSSSRLPTDSTDDESSDD

W9RBS1 Uncharacterized protein2.1e-1232.48Show/hide
Query:  DILVHPSDEQVEEARRLICRPHKTWTISTTRKLSLKPLDINDQATVWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSKKMVG
        +++    +EQ++E  + I      W +S     +    ++   A VW + + +RL+ ++H  +I RNRA+++Y ++ G   N G LI ++IR+C++K  G
Subjt:  DILVHPSDEQVEEARRLICRPHKTWTISTTRKLSLKPLDINDQATVWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSCSKKMVG

Query:  PLVFPGLITELCLQAGV
         L FP LI+ELC+Q+ V
Subjt:  PLVFPGLITELCLQAGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCATTGTTGTCGAGTAGACAGAACTGCTCTACCCTTGGTAATGACATTTTGGTGCATCCATCGGACGAGCAAGTAGAGGAGGCGCGTAGACTTATTTGTAGACC
ACATAAGACATGGACTATCTCAACCACGAGGAAGCTTTCCTTAAAGCCCCTTGACATTAATGACCAAGCGACAGTTTGGATGTATGTGGTGAAGAACCGGTTGATACCCA
CTTCCCACGATTCCTCCATTAAGCGCAATAGAGCGATGATGGTGTACATTCTCATGAAGGGCGTTGAGTTCAACTTTGGGGAACTCATAAGAAATGAGATACGGAGTTGC
TCGAAGAAAATGGTAGGCCCACTTGTTTTTCCTGGATTAATAACTGAGTTATGCTTACAGGCGGGAGTGGAGGCCGATGATGCCAATGTTGTGATGCCCAAGAAGCCTTT
CACATCTCTAAGAAGAGTTCGGGGGTATTCCATTGTTAGAGAGGAAGATTCTCCCATTACCGCCGCGGATCCCAAGACCCGAGGGGTGGTGACTAGGGAGCAGTATGATG
AGCTTAGGCACAACTATGAGCTTCTGTTAGTTACTCAACGTGCCACATGTGCTTTCCTCAAGAAGATATACGGTGATGAAGCACCTTCTTTCCCCGATGAGCTGACGGCC
GATTTACCATCTTCTTCCCGTCTTCCTACCGATTCCACCGATGATGAGTCTTCCGATGATGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGACTCATTGTTGTCGAGTAGACAGAACTGCTCTACCCTTGGTAATGACATTTTGGTGCATCCATCGGACGAGCAAGTAGAGGAGGCGCGTAGACTTATTTGTAGACC
ACATAAGACATGGACTATCTCAACCACGAGGAAGCTTTCCTTAAAGCCCCTTGACATTAATGACCAAGCGACAGTTTGGATGTATGTGGTGAAGAACCGGTTGATACCCA
CTTCCCACGATTCCTCCATTAAGCGCAATAGAGCGATGATGGTGTACATTCTCATGAAGGGCGTTGAGTTCAACTTTGGGGAACTCATAAGAAATGAGATACGGAGTTGC
TCGAAGAAAATGGTAGGCCCACTTGTTTTTCCTGGATTAATAACTGAGTTATGCTTACAGGCGGGAGTGGAGGCCGATGATGCCAATGTTGTGATGCCCAAGAAGCCTTT
CACATCTCTAAGAAGAGTTCGGGGGTATTCCATTGTTAGAGAGGAAGATTCTCCCATTACCGCCGCGGATCCCAAGACCCGAGGGGTGGTGACTAGGGAGCAGTATGATG
AGCTTAGGCACAACTATGAGCTTCTGTTAGTTACTCAACGTGCCACATGTGCTTTCCTCAAGAAGATATACGGTGATGAAGCACCTTCTTTCCCCGATGAGCTGACGGCC
GATTTACCATCTTCTTCCCGTCTTCCTACCGATTCCACCGATGATGAGTCTTCCGATGATGAATAG
Protein sequenceShow/hide protein sequence
MDSLLSSRQNCSTLGNDILVHPSDEQVEEARRLICRPHKTWTISTTRKLSLKPLDINDQATVWMYVVKNRLIPTSHDSSIKRNRAMMVYILMKGVEFNFGELIRNEIRSC
SKKMVGPLVFPGLITELCLQAGVEADDANVVMPKKPFTSLRRVRGYSIVREEDSPITAADPKTRGVVTREQYDELRHNYELLLVTQRATCAFLKKIYGDEAPSFPDELTA
DLPSSSRLPTDSTDDESSDDE