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Moc09g27780 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g27780
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr9:20812811..20816540
RNA-Seq ExpressionMoc09g27780
SyntenyMoc09g27780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056500.1 photosystem II CP47 reaction center protein-like [Cucumis melo var. makuwa]7.7e-0753.97Show/hide
Query:  GYVIDRSANCNVTVVGRASPIPSFLKKDKGIRLILAPKSHNVYPIFCPPMETGMVKLPRSFIF
        G V+D SANC+ TVVG A PIP FLK D  I+LILAP+ H+ +P   P +E  +VKL  S  F
Subjt:  GYVIDRSANCNVTVVGRASPIPSFLKKDKGIRLILAPKSHNVYPIFCPPMETGMVKLPRSFIF
XP_020272454.1 uncharacterized protein LOC109847633 [Asparagus officinalis]1.6e-0438.96Show/hide
Query:  MTNLGALCCFLGLELTPYSSGLFLTQTKFAYDVRWRFRMLNAKSCVSPCTLKESNALSANCSPADSFLFRQMANALS
        MT+LG L  FLGLE+   ++G+F++Q+K+A D+  RF+M+N K   +P  + ES   +     A S  FR M   L+
Subjt:  MTNLGALCCFLGLELTPYSSGLFLTQTKFAYDVRWRFRMLNAKSCVSPCTLKESNALSANCSPADSFLFRQMANALS
XP_022139699.1 uncharacterized protein LOC111010547 [Momordica charantia]1.3e-0642.11Show/hide
Query:  MTNLGALCCFLGLELTPYSSGLFLTQTKFAYDVRWRFRMLNAKSCVSPCTLKESNALSANCSPADSFLFRQMANAL
        MT+LGAL  FLGLE++  ++GLF+ + K+  DV  RF ML+AK C +P +L  +  + A+CS  D   +R +  +L
Subjt:  MTNLGALCCFLGLELTPYSSGLFLTQTKFAYDVRWRFRMLNAKSCVSPCTLKESNALSANCSPADSFLFRQMANAL
XP_022143496.1 uncharacterized protein LOC111013373 [Momordica charantia]8.5e-0642.86Show/hide
Query:  MTNLGALCCFLGLELTPYSSGLFLTQTKFAYDVRWRFRMLNAKSCVSPCTLKESNALSANCSPADSFLFRQMANALS
        MT+LGAL  FLGLE++  S G+ + QTK+  D+  RF ML AKSC +P  L  +     +CS  D+  +R +  AL+
Subjt:  MTNLGALCCFLGLELTPYSSGLFLTQTKFAYDVRWRFRMLNAKSCVSPCTLKESNALSANCSPADSFLFRQMANALS
XP_022152156.1 uncharacterized protein LOC111019945 [Momordica charantia]4.2e-0542.67Show/hide
Query:  MTNLGALCCFLGLELTPYSSGLFLTQTKFAYDVRWRFRMLNAKSCVSPCTLKESNALSANCSPADSFLFRQMANA
        MT+LG L  FLGLE+T  S G+ + Q K+  D+  RF ML+AK C +P  L  S+ L   CS  D+  +R +  A
Subjt:  MTNLGALCCFLGLELTPYSSGLFLTQTKFAYDVRWRFRMLNAKSCVSPCTLKESNALSANCSPADSFLFRQMANA
TrEMBL top hitse value%identityAlignment
A0A392PAT4 Uncharacterized protein (Fragment)1.0e-0445Show/hide
Query:  GYVIDRSANCNVTVVGRASPIPSFLKKDKGIRLILAPKSHNVYPIFCPPMETGMVKLPRS
        G+ + RS   NV +V   SP  SF + + GI+L LAP+S +  PI+ PP+  G+VKLP S
Subjt:  GYVIDRSANCNVTVVGRASPIPSFLKKDKGIRLILAPKSHNVYPIFCPPMETGMVKLPRS
A0A5D3DZH8 Photosystem II CP47 reaction center protein-like3.7e-0753.97Show/hide
Query:  GYVIDRSANCNVTVVGRASPIPSFLKKDKGIRLILAPKSHNVYPIFCPPMETGMVKLPRSFIF
        G V+D SANC+ TVVG A PIP FLK D  I+LILAP+ H+ +P   P +E  +VKL  S  F
Subjt:  GYVIDRSANCNVTVVGRASPIPSFLKKDKGIRLILAPKSHNVYPIFCPPMETGMVKLPRSFIF
A0A6J1CDR7 uncharacterized protein LOC1110105476.4e-0742.11Show/hide
Query:  MTNLGALCCFLGLELTPYSSGLFLTQTKFAYDVRWRFRMLNAKSCVSPCTLKESNALSANCSPADSFLFRQMANAL
        MT+LGAL  FLGLE++  ++GLF+ + K+  DV  RF ML+AK C +P +L  +  + A+CS  D   +R +  +L
Subjt:  MTNLGALCCFLGLELTPYSSGLFLTQTKFAYDVRWRFRMLNAKSCVSPCTLKESNALSANCSPADSFLFRQMANAL
A0A6J1CQE8 uncharacterized protein LOC1110133734.1e-0642.86Show/hide
Query:  MTNLGALCCFLGLELTPYSSGLFLTQTKFAYDVRWRFRMLNAKSCVSPCTLKESNALSANCSPADSFLFRQMANALS
        MT+LGAL  FLGLE++  S G+ + QTK+  D+  RF ML AKSC +P  L  +     +CS  D+  +R +  AL+
Subjt:  MTNLGALCCFLGLELTPYSSGLFLTQTKFAYDVRWRFRMLNAKSCVSPCTLKESNALSANCSPADSFLFRQMANALS
A0A6J1DGS4 uncharacterized protein LOC1110199452.0e-0542.67Show/hide
Query:  MTNLGALCCFLGLELTPYSSGLFLTQTKFAYDVRWRFRMLNAKSCVSPCTLKESNALSANCSPADSFLFRQMANA
        MT+LG L  FLGLE+T  S G+ + Q K+  D+  RF ML+AK C +P  L  S+ L   CS  D+  +R +  A
Subjt:  MTNLGALCCFLGLELTPYSSGLFLTQTKFAYDVRWRFRMLNAKSCVSPCTLKESNALSANCSPADSFLFRQMANA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
ATMG00810.1 DNA/RNA polymerases superfamily protein7.7e-0536.84Show/hide
Query:  MTNLGALCCFLGLELTPYSSGLFLTQTKFAYDVRWRFRMLNAKSCVSPCTLKESNALSANCSPADSFLFRQMANAL
        M +LG +  FLG+++  + SGLFL+QTK+A  +     ML+ K   +P  LK ++++S    P D   FR +  AL
Subjt:  MTNLGALCCFLGLELTPYSSGLFLTQTKFAYDVRWRFRMLNAKSCVSPCTLKESNALSANCSPADSFLFRQMANAL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAATCTTGGCGCACTCTGTTGTTTTCTTGGACTTGAACTCACTCCATACAGCTCTGGTCTATTTCTCACTCAGACTAAATTCGCTTATGATGTTCGTTGGCGCTT
CAGGATGCTCAATGCTAAGTCTTGTGTTTCACCTTGCACCTTAAAGGAGTCTAATGCTCTTTCTGCTAATTGCTCTCCCGCTGACTCTTTCTTATTTCGACAAATGGCGA
ATGCTCTCTCTGGTGGAGTTGCTCCCACTTGCTCGATTCGTACATTGGCTGATGACTTGAAAGGATATGTGATTGATCGGTCTGCTAACTGCAATGTGACTGTTGTTGGT
CGTGCTTCTCCCATTCCTAGCTTTTTGAAGAAGGACAAGGGCATCAGGTTGATACTCGCCCCTAAATCGCATAACGTCTACCCTATCTTCTGTCCTCCAATGGAAACTGG
TATGGTAAAGCTCCCAAGATCCTTCATCTTTTCCGGAATTTTGCTTCTGCTTCCGCACATCAAGGAACTTTCTAAATTGCACATCCTGCTATTTCTTTTGCAACCGCTTT
GGTTCCACTACTATCTGCTCGCTACTGTTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAATCTTGGCGCACTCTGTTGTTTTCTTGGACTTGAACTCACTCCATACAGCTCTGGTCTATTTCTCACTCAGACTAAATTCGCTTATGATGTTCGTTGGCGCTT
CAGGATGCTCAATGCTAAGTCTTGTGTTTCACCTTGCACCTTAAAGGAGTCTAATGCTCTTTCTGCTAATTGCTCTCCCGCTGACTCTTTCTTATTTCGACAAATGGCGA
ATGCTCTCTCTGGTGGAGTTGCTCCCACTTGCTCGATTCGTACATTGGCTGATGACTTGAAAGGATATGTGATTGATCGGTCTGCTAACTGCAATGTGACTGTTGTTGGT
CGTGCTTCTCCCATTCCTAGCTTTTTGAAGAAGGACAAGGGCATCAGGTTGATACTCGCCCCTAAATCGCATAACGTCTACCCTATCTTCTGTCCTCCAATGGAAACTGG
TATGGTAAAGCTCCCAAGATCCTTCATCTTTTCCGGAATTTTGCTTCTGCTTCCGCACATCAAGGAACTTTCTAAATTGCACATCCTGCTATTTCTTTTGCAACCGCTTT
GGTTCCACTACTATCTGCTCGCTACTGTTCATTAA
Protein sequenceShow/hide protein sequence
MTNLGALCCFLGLELTPYSSGLFLTQTKFAYDVRWRFRMLNAKSCVSPCTLKESNALSANCSPADSFLFRQMANALSGGVAPTCSIRTLADDLKGYVIDRSANCNVTVVG
RASPIPSFLKKDKGIRLILAPKSHNVYPIFCPPMETGMVKLPRSFIFSGILLLLPHIKELSKLHILLFLLQPLWFHYYLLATVH