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Moc09g28170 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g28170
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr9:21194173..21194697
RNA-Seq ExpressionMoc09g28170
SyntenyMoc09g28170
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0043167 - ion binding (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN61548.1 hypothetical protein VITISV_043524 [Vitis vinifera]7.0e-1040.4Show/hide
Query:  MKTTILNSCGKEKLELKDVKDAAPGEEIRINDF-----------------GASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIGDVNFEMANSSV
        M+  + NS GKEKL+  D++D    EEIR  D                  GASF+TT    I++NYVA +   VYLADG   D++G+GDV   + N SV
Subjt:  MKTTILNSCGKEKLELKDVKDAAPGEEIRINDF-----------------GASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIGDVNFEMANSSV

CAN77512.1 hypothetical protein VITISV_002962 [Vitis vinifera]9.2e-1046.34Show/hide
Query:  MKTTILNSCGKEKLELKDVKDAAPGEEIRINDFGASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIGDVNFEMANSSV
        M+  I NS G  KL+  D KD    E++   D GASF+TT    I+ NYV  N  NVYLADGEP  I+G GD+  +M+N ++
Subjt:  MKTTILNSCGKEKLELKDVKDAAPGEEIRINDFGASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIGDVNFEMANSSV

CAN78192.1 hypothetical protein VITISV_036909 [Vitis vinifera]1.2e-0938.46Show/hide
Query:  MKTTILNSCGKEKLELKDVKDAAPGEEIR----------------------INDFGASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIGDVNFEMA
        M+  + NS GKEKL+  D++D    EEIR                      + D GASF+TT    I++NYVA +   VYLADG   D++G+GDV   + 
Subjt:  MKTTILNSCGKEKLELKDVKDAAPGEEIR----------------------INDFGASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIGDVNFEMA

Query:  NSSV
        N SV
Subjt:  NSSV

KAG6525408.1 hypothetical protein ZIOFF_015364 [Zingiber officinale]1.8e-1040.19Show/hide
Query:  MKTTILNSCGKEKLELKDVKDAAPGEEIRI-------------------------NDFGASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIGDVNF
        M+  + NS G  KL   DV+D    EE+RI                          D GASF+TT Q  IL+NYVA N   VYLADGEP DI+G G +  
Subjt:  MKTTILNSCGKEKLELKDVKDAAPGEEIRI-------------------------NDFGASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIGDVNF

Query:  EMANSSV
        +M+N  V
Subjt:  EMANSSV

RVW17147.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]5.9e-0937.38Show/hide
Query:  MKTTILNSCGKEKLELKDVKDAAPGEEIRINDF-------------------------GASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIGDVNF
        M+  + NS GKEKL+  D++D    EEIR  D                          GASF+TT    I++NYVA +   VYLADG   D++G+GDV  
Subjt:  MKTTILNSCGKEKLELKDVKDAAPGEEIRINDF-------------------------GASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIGDVNF

Query:  EMANSSV
         + N SV
Subjt:  EMANSSV

TrEMBL top hitse value%identityAlignment
A0A438C1P0 Retrovirus-related Pol polyprotein from transposon TNT 1-942.9e-0937.38Show/hide
Query:  MKTTILNSCGKEKLELKDVKDAAPGEEIRINDF-------------------------GASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIGDVNF
        M+  + NS GKEKL+  D++D    EEIR  D                          GASF+TT    I++NYVA +   VYLADG   D++G+GDV  
Subjt:  MKTTILNSCGKEKLELKDVKDAAPGEEIRINDF-------------------------GASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIGDVNF

Query:  EMANSSV
         + N SV
Subjt:  EMANSSV

A5AQN2 Uncharacterized protein5.8e-1038.46Show/hide
Query:  MKTTILNSCGKEKLELKDVKDAAPGEEIR----------------------INDFGASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIGDVNFEMA
        M+  + NS GKEKL+  D++D    EEIR                      + D GASF+TT    I++NYVA +   VYLADG   D++G+GDV   + 
Subjt:  MKTTILNSCGKEKLELKDVKDAAPGEEIR----------------------INDFGASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIGDVNFEMA

Query:  NSSV
        N SV
Subjt:  NSSV

A5ASH8 gag_pre-integrs domain-containing protein3.8e-0935.14Show/hide
Query:  MKTTILNSCGKEKLELKDVKDAAPGEEIR-----------------------------INDFGASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIG
        M+  + NS GKEKL+  D++D    EEIR                             + D GASF+TT    I++NYVA +   VYLADG   D++G+G
Subjt:  MKTTILNSCGKEKLELKDVKDAAPGEEIR-----------------------------INDFGASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIG

Query:  DVNFEMANSSV
        DV   + N S+
Subjt:  DVNFEMANSSV

A5BM25 Integrase catalytic domain-containing protein3.4e-1040.4Show/hide
Query:  MKTTILNSCGKEKLELKDVKDAAPGEEIRINDF-----------------GASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIGDVNFEMANSSV
        M+  + NS GKEKL+  D++D    EEIR  D                  GASF+TT    I++NYVA +   VYLADG   D++G+GDV   + N SV
Subjt:  MKTTILNSCGKEKLELKDVKDAAPGEEIRINDF-----------------GASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIGDVNFEMANSSV

A5C328 ANK_REP_REGION domain-containing protein4.4e-1046.34Show/hide
Query:  MKTTILNSCGKEKLELKDVKDAAPGEEIRINDFGASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIGDVNFEMANSSV
        M+  I NS G  KL+  D KD    E++   D GASF+TT    I+ NYV  N  NVYLADGEP  I+G GD+  +M+N ++
Subjt:  MKTTILNSCGKEKLELKDVKDAAPGEEIRINDFGASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIGDVNFEMANSSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACGACTATTTTAAATTCTTGTGGAAAAGAGAAATTGGAATTAAAAGATGTCAAAGATGCAGCTCCTGGAGAGGAGATTCGCATAAATGATTTTGGTGCGTCATT
TTATACTACAGGACAGCATTATATTCTTAAGAATTATGTTGCAAAAAATGATGAAAATGTGTATCTTGCTGATGGAGAGCCTTTTGACATCATTGGGATTGGTGACGTAA
ATTTTGAAATGGCAAACAGTTCAGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGACGACTATTTTAAATTCTTGTGGAAAAGAGAAATTGGAATTAAAAGATGTCAAAGATGCAGCTCCTGGAGAGGAGATTCGCATAAATGATTTTGGTGCGTCATT
TTATACTACAGGACAGCATTATATTCTTAAGAATTATGTTGCAAAAAATGATGAAAATGTGTATCTTGCTGATGGAGAGCCTTTTGACATCATTGGGATTGGTGACGTAA
ATTTTGAAATGGCAAACAGTTCAGTCTGA
Protein sequenceShow/hide protein sequence
MKTTILNSCGKEKLELKDVKDAAPGEEIRINDFGASFYTTGQHYILKNYVAKNDENVYLADGEPFDIIGIGDVNFEMANSSV