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Moc09g28220 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g28220
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:21248103..21251387
RNA-Seq ExpressionMoc09g28220
SyntenyMoc09g28220
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]1.3e-1730.21Show/hide
Query:  TVEHDSCEIREHFVDDHLLAISEVSWYAVYANYLVSNIIPNDLSKHQIKKFFHDVR---------LRIGYED------SEHDTE----------------
        +++HDSCEI+EHFVD++LLAISEV WYA YANYLVS IIPNDLSKHQIKKFFHDVR          R+G ++      +EH+T                 
Subjt:  TVEHDSCEIREHFVDDHLLAISEVSWYAVYANYLVSNIIPNDLSKHQIKKFFHDVR---------LRIGYED------SEHDTE----------------

Query:  ---------------------------------------------PLEH----------------SDSATVEIH---------YQIAL------------
                                                      LEH                 ++  +++H         Y+ A             
Subjt:  ---------------------------------------------PLEH----------------SDSATVEIH---------YQIAL------------

Query:  ---------------------------------SAILEDTPP-------------------------------ATLQAKGENEDLGELPQE-DGDEYEDE
                                         S ++E   P                                 L    E+ED GELPQE  GDE+EDE
Subjt:  ---------------------------------SAILEDTPP-------------------------------ATLQAKGENEDLGELPQE-DGDEYEDE

Query:  EENDDISQYKVRVQTPVHESQQDDEESPVQE
        E+NDDISQY+V+V+TPVHESQQ DEE P +E
Subjt:  EENDDISQYKVRVQTPVHESQQDDEESPVQE

XP_022155016.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022160 [Momordica charantia]1.0e-0653.85Show/hide
Query:  DSCEIREHFVDDHLLAISEVSWYAVYANYLVSNIIPNDLSKHQIKKFFHDVR
        D   IREHF+D+ LL +  V WYA  ANYLVS I+P + +K Q+KKF ++VR
Subjt:  DSCEIREHFVDDHLLAISEVSWYAVYANYLVSNIIPNDLSKHQIKKFFHDVR

XP_022155996.1 uncharacterized protein LOC111022971 [Momordica charantia]8.5e-0960Show/hide
Query:  VEHDSCEIREHFVDDHLLAISEVSWYAVYANYLVSNIIPNDLSKHQIKKFFHDVR
        ++    EIRE FVD+ LL I  VSWYA  ANYLVS IIP++ S+ Q+KKF HDVR
Subjt:  VEHDSCEIREHFVDDHLLAISEVSWYAVYANYLVSNIIPNDLSKHQIKKFFHDVR

XP_038976654.1 uncharacterized protein LOC113463578 [Phoenix dactylifera]4.0e-0652.63Show/hide
Query:  GTVEHDSCEIREHFVDDHLLAISEVSWYAVYANYLVSNIIPNDLSKHQIKKFFHDVR
        G    D   I E F+D+ LLA+S + WYA + NYLVS I+P DLS HQ KKF  DV+
Subjt:  GTVEHDSCEIREHFVDDHLLAISEVSWYAVYANYLVSNIIPNDLSKHQIKKFFHDVR

XP_038982209.1 uncharacterized protein LOC120110689 [Phoenix dactylifera]5.2e-0652.63Show/hide
Query:  GTVEHDSCEIREHFVDDHLLAISEVSWYAVYANYLVSNIIPNDLSKHQIKKFFHDVR
        G    D   I E F D+ LLA+S + WYA + NYLVS I+P DLS HQ KKF  DV+
Subjt:  GTVEHDSCEIREHFVDDHLLAISEVSWYAVYANYLVSNIIPNDLSKHQIKKFFHDVR

TrEMBL top hitse value%identityAlignment
A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220076.3e-1830.21Show/hide
Query:  TVEHDSCEIREHFVDDHLLAISEVSWYAVYANYLVSNIIPNDLSKHQIKKFFHDVR---------LRIGYED------SEHDTE----------------
        +++HDSCEI+EHFVD++LLAISEV WYA YANYLVS IIPNDLSKHQIKKFFHDVR          R+G ++      +EH+T                 
Subjt:  TVEHDSCEIREHFVDDHLLAISEVSWYAVYANYLVSNIIPNDLSKHQIKKFFHDVR---------LRIGYED------SEHDTE----------------

Query:  ---------------------------------------------PLEH----------------SDSATVEIH---------YQIAL------------
                                                      LEH                 ++  +++H         Y+ A             
Subjt:  ---------------------------------------------PLEH----------------SDSATVEIH---------YQIAL------------

Query:  ---------------------------------SAILEDTPP-------------------------------ATLQAKGENEDLGELPQE-DGDEYEDE
                                         S ++E   P                                 L    E+ED GELPQE  GDE+EDE
Subjt:  ---------------------------------SAILEDTPP-------------------------------ATLQAKGENEDLGELPQE-DGDEYEDE

Query:  EENDDISQYKVRVQTPVHESQQDDEESPVQE
        E+NDDISQY+V+V+TPVHESQQ DEE P +E
Subjt:  EENDDISQYKVRVQTPVHESQQDDEESPVQE

A0A6J1DQF5 LOW QUALITY PROTEIN: uncharacterized protein LOC1110221605.0e-0753.85Show/hide
Query:  DSCEIREHFVDDHLLAISEVSWYAVYANYLVSNIIPNDLSKHQIKKFFHDVR
        D   IREHF+D+ LL +  V WYA  ANYLVS I+P + +K Q+KKF ++VR
Subjt:  DSCEIREHFVDDHLLAISEVSWYAVYANYLVSNIIPNDLSKHQIKKFFHDVR

A0A6J1DTH7 uncharacterized protein LOC1110229714.1e-0960Show/hide
Query:  VEHDSCEIREHFVDDHLLAISEVSWYAVYANYLVSNIIPNDLSKHQIKKFFHDVR
        ++    EIRE FVD+ LL I  VSWYA  ANYLVS IIP++ S+ Q+KKF HDVR
Subjt:  VEHDSCEIREHFVDDHLLAISEVSWYAVYANYLVSNIIPNDLSKHQIKKFFHDVR

A0A6J1DXK6 uncharacterized protein LOC1110254333.3e-0684.38Show/hide
Query:  EHDSCEIREHFVDDHLLAISEVSWYAVYANYL
        EHDSCEI+EHFVD++LLAISEV WYA YANYL
Subjt:  EHDSCEIREHFVDDHLLAISEVSWYAVYANYL

A0A6J1E110 uncharacterized protein LOC1110254244.3e-0651.92Show/hide
Query:  DSCEIREHFVDDHLLAISEVSWYAVYANYLVSNIIPNDLSKHQIKKFFHDVR
        D   IRE F+D+ LL +  V WYA  ANYLVS I+P + +K Q+KKF ++VR
Subjt:  DSCEIREHFVDDHLLAISEVSWYAVYANYLVSNIIPNDLSKHQIKKFFHDVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGACCCGCGCCACGGCTTTCGACCACCAAGGGAGACCGAACCCGCTTGCGAGGGAAGGGTTGCGCTGCCGGAAAACACCCTGAGGACAGCACCCACGTACACCG
CTGCCGCTTGCCTCTACCCGACGCCCGCTCACCGCTGCTGCCCGACGCCCGCGCACGCCTGCTGCTGCCGGAATCTGTGCACCCGTTGCTGCCCGACGCCGCGCACCGCT
GCTGCCCGGAGTCGCACGCCGCCGCTGCCTGCCGCGCCGCCTGCTGCTGTCAACTGGAGAAGGTGAGCCGCTGTGTCAGAGGTCGTCGTTCGTTAAGTGCTTCGGGGACG
GTTGAGCATGATAGCTGTGAGATTAGAGAGCATTTTGTGGATGACCATCTGTTAGCTATTTCTGAAGTCTCTTGGTATGCTGTTTATGCGAACTATTTGGTTAGTAATAT
AATTCCTAATGATTTGAGTAAGCACCAGATAAAGAAGTTCTTTCATGATGTTAGGTTAAGAATAGGTTATGAAGACTCTGAACACGACACGGAGCCCTTGGAGCATTCAG
ATTCAGCCACGGTCGAAATTCACTACCAAATTGCGCTAAGCGCAATTTTGGAGGACACTCCACCGGCTACTCTACAAGCAAAGGGAGAAAATGAGGATCTTGGAGAATTA
CCTCAGGAAGATGGAGATGAGTACGAGGACGAAGAAGAAAATGACGATATCTCTCAATATAAAGTGAGAGTACAAACTCCGGTGCACGAATCACAACAAGATGATGAGGA
GTCCCCTGTGCAAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGGACCCGCGCCACGGCTTTCGACCACCAAGGGAGACCGAACCCGCTTGCGAGGGAAGGGTTGCGCTGCCGGAAAACACCCTGAGGACAGCACCCACGTACACCG
CTGCCGCTTGCCTCTACCCGACGCCCGCTCACCGCTGCTGCCCGACGCCCGCGCACGCCTGCTGCTGCCGGAATCTGTGCACCCGTTGCTGCCCGACGCCGCGCACCGCT
GCTGCCCGGAGTCGCACGCCGCCGCTGCCTGCCGCGCCGCCTGCTGCTGTCAACTGGAGAAGGTGAGCCGCTGTGTCAGAGGTCGTCGTTCGTTAAGTGCTTCGGGGACG
GTTGAGCATGATAGCTGTGAGATTAGAGAGCATTTTGTGGATGACCATCTGTTAGCTATTTCTGAAGTCTCTTGGTATGCTGTTTATGCGAACTATTTGGTTAGTAATAT
AATTCCTAATGATTTGAGTAAGCACCAGATAAAGAAGTTCTTTCATGATGTTAGGTTAAGAATAGGTTATGAAGACTCTGAACACGACACGGAGCCCTTGGAGCATTCAG
ATTCAGCCACGGTCGAAATTCACTACCAAATTGCGCTAAGCGCAATTTTGGAGGACACTCCACCGGCTACTCTACAAGCAAAGGGAGAAAATGAGGATCTTGGAGAATTA
CCTCAGGAAGATGGAGATGAGTACGAGGACGAAGAAGAAAATGACGATATCTCTCAATATAAAGTGAGAGTACAAACTCCGGTGCACGAATCACAACAAGATGATGAGGA
GTCCCCTGTGCAAGAGTAA
Protein sequenceShow/hide protein sequence
MQGPAPRLSTTKGDRTRLRGKGCAAGKHPEDSTHVHRCRLPLPDARSPLLPDARARLLLPESVHPLLPDAAHRCCPESHAAAACRAACCCQLEKVSRCVRGRRSLSASGT
VEHDSCEIREHFVDDHLLAISEVSWYAVYANYLVSNIIPNDLSKHQIKKFFHDVRLRIGYEDSEHDTEPLEHSDSATVEIHYQIALSAILEDTPPATLQAKGENEDLGEL
PQEDGDEYEDEEENDDISQYKVRVQTPVHESQQDDEESPVQE