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Moc09g28280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc09g28280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchr9:21277853..21278978
RNA-Seq ExpressionMoc09g28280
SyntenyMoc09g28280
Gene Ontology termsGO:0043167 - ion binding (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033275.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]2.7e-1763.16Show/hide
Query:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDV
        DP DP AK KYC +VYACHSKRN TG MK+HLE CKKYP QKKRD+TQ  L F+P+D      +  S+LVCESF +
Subjt:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDV
KAA0040955.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]2.7e-1763.16Show/hide
Query:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDV
        DP DP AK KYC +VYACHSKRN TG MK+HLE CKKYP QKKRD+TQ  L F+P+D      +  S+LVCESF +
Subjt:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDV
TYK03730.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]2.1e-1762.34Show/hide
Query:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDVK
        DP DP AK KYC +VYACHSKRN TG MK+HLE CKKYP QKKRD+TQ  L F+P+D      +  S+LVCESF ++
Subjt:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDVK
TYK09690.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]2.7e-1763.16Show/hide
Query:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDV
        DP DP AK KYC +VYACHSKRN TG MK+HLE CKKYP QKKRD+TQ  L F+P+D      +  S+LVCESF +
Subjt:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDV
TYK14363.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]2.7e-1763.16Show/hide
Query:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDV
        DP DP AK KYC +VYACHSKRN TG MK+HLE CKKYP QKKRD+TQ  L F+P+D      +  S+LVCESF +
Subjt:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDV
TrEMBL top hitse value%identityAlignment
A0A5A7SVU3 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.3e-1763.16Show/hide
Query:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDV
        DP DP AK KYC +VYACHSKRN TG MK+HLE CKKYP QKKRD+TQ  L F+P+D      +  S+LVCESF +
Subjt:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDV
A0A5A7THT5 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.3e-1763.16Show/hide
Query:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDV
        DP DP AK KYC +VYACHSKRN TG MK+HLE CKKYP QKKRD+TQ  L F+P+D      +  S+LVCESF +
Subjt:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDV
A0A5D3BX83 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.0e-1762.34Show/hide
Query:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDVK
        DP DP AK KYC +VYACHSKRN TG MK+HLE CKKYP QKKRD+TQ  L F+P+D      +  S+LVCESF ++
Subjt:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDVK
A0A5D3CEC4 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.3e-1763.16Show/hide
Query:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDV
        DP DP AK KYC +VYACHSKRN TG MK+HLE CKKYP QKKRD+TQ  L F+P+D      +  S+LVCESF +
Subjt:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDV
A0A5D3CR68 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.3e-1763.16Show/hide
Query:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDV
        DP DP AK KYC +VYACHSKRN TG MK+HLE CKKYP QKKRD+TQ  L F+P+D      +  S+LVCESF +
Subjt:  DPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRTQTQLVFEPQDSSCAEEEFDSKLVCESFDV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGTGTCGGGGCTGAAGGTGCTGTGAATGACCGCTGTTCGATTTTAGAAGATGAGAAGAAGATATTGTGCTGCCCAACTCCGCCCCTGGCCCCTTCGAATGTTGT
TCTATTCCGATGCTGCCAACAACCCCAACCCTCTTTCGATCCTCTTTTAAAGTTTACAAACTGGATTCTGGATCTGAGTGATCCAGAAGATCCTCATGCTAAATCTAAAT
ATTGTGCGATTGTGTATGCATGTCATTCTAAGCGTAATAGTACTGGAAATATGAAAAACCATTTGGAAATTTGTAAGAAATATCCTAACCAAAAGAAGAGGGACCGAACC
CAAACCCAATTGGTTTTCGAACCTCAAGATTCTAGTTGTGCTGAAGAGGAATTTGATTCAAAGCTTGTATGCGAGTCATTTGATGTGAAGAGTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGTGTCGGGGCTGAAGGTGCTGTGAATGACCGCTGTTCGATTTTAGAAGATGAGAAGAAGATATTGTGCTGCCCAACTCCGCCCCTGGCCCCTTCGAATGTTGT
TCTATTCCGATGCTGCCAACAACCCCAACCCTCTTTCGATCCTCTTTTAAAGTTTACAAACTGGATTCTGGATCTGAGTGATCCAGAAGATCCTCATGCTAAATCTAAAT
ATTGTGCGATTGTGTATGCATGTCATTCTAAGCGTAATAGTACTGGAAATATGAAAAACCATTTGGAAATTTGTAAGAAATATCCTAACCAAAAGAAGAGGGACCGAACC
CAAACCCAATTGGTTTTCGAACCTCAAGATTCTAGTTGTGCTGAAGAGGAATTTGATTCAAAGCTTGTATGCGAGTCATTTGATGTGAAGAGTCGTTGA
Protein sequenceShow/hide protein sequence
MIGVGAEGAVNDRCSILEDEKKILCCPTPPLAPSNVVLFRCCQQPQPSFDPLLKFTNWILDLSDPEDPHAKSKYCAIVYACHSKRNSTGNMKNHLEICKKYPNQKKRDRT
QTQLVFEPQDSSCAEEEFDSKLVCESFDVKSR